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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:142820..146593+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00552.0 ID=Blg00552.0|Name=Blg00552.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3774bp|location=Sequence derived from alignment at Sc0000042:142820..146593+ (Branchiostoma lanceolatum)
ATGGCGATCAACCCCAGGTCCGTGCGTTCCATCGGACTCTCACTGATCGT
GTTCGGGGCGCTCAGCGTGATATTCGGTCTGGCCTCCGACCTGACCTTCA
GCGATGCCTACCTGCACCAGGCCTCCGGACCCATCTGGAGCGGCGTGTTT
GTGAGTCGCGAATTTGTCAACTTGTTTTCATATTGCATAATCATATAGTG
CTGAAGTTTTTATTTATGGGGTCATGGTCCTGGGTTGACGCCACCAATGT
TGTCAAATGTTGTGACTTGGGAAAGGCACTTTACATGACTACCCTCACCC
CACCCAGGTGTAAAAATGGGTATATTATGTGTGGGTCACGACACCACTAA
TAGCTGCCTGTGTTCCACGTGTATTACACTGTTGCAATTCCATTAAAATC
AAATGAAATGAAATATGATTTTGCGTCATTAGGAATTAAACAGGTTGTGT
TCTGTTTGACTTGATGTCCTTGACAGAACAGAATGAGGTTTATCCTATTT
ACCAGTTTTGACTGTTGATGGGTGTTGTACGAGATAGATTTGGATAGACA
TTCGGTGATGATGATAATTATGTACATGATAGTTTGCAGGAGATAAAACA
GATAAATGAGGTTACACTTATTTGTTAGTTTGATAAGTTAAGTCTTATGG
CATGATTAATGATTGACACACAACAGAATCATAAGCAATGTATTACATAC
CCAACACTGAAATAGTTGGTTACGTAAAGTGTAGCCTTTTCATTAATGTC
ATTTACCCATACAGATGAACTTTCACGCTAAGAATAGTAATGGTTGATAA
AATTTCAACAAAAGTACCACATTGCCAATTATGAATCATGTCATATTTTC
TGTTTTGTCTTGTTCTTGCAGGTTCTCATTACGGGTATCTTGGCTGCGTC
CATACACTATGAGAAAGGGAACAGATGCATTGTGAGTTACTCTCTGTCTA
TCTACATCAAATGGACTTTTTACCCAGATGATTCCACAGAATCAAAAAAC
TTTTTAGCCTACAGAAGGATTATTGCAAAGGTTAGTGAGTGAGTGAGTGT
GAGGTGTAACAGGCCGTTCAGTGTAATATAACCAGCTGCTGATGCGCTGC
GTGCCTGCAAAGCTGGTGTGCTACGCCAAATGGCAGTTATACCTGCTATG
CAGATACAGAATATGATAGTGCATCTAATTGTTCGTTATCTTCCAGATGA
TAGCCCTGACCACCCTGGCACCATGGCCCAGTGTAATATAACCAGCTGCT
GGCACGCCCCGTGCCTGCGAAGCTGGTGTGTTACACCAAGGGGTGGTTAT
TCCAACTACATAAATACAGATACAGAATATGATAGTACATATGATTGTTT
GTTATCTTCCAGATGATAGCCCTGACCACCCTGGGGACCATGTCCGTCCT
CCTGACCATCGCGTCCTGGATCATCTCCTCTATCGGCCTGAACGGGCGAG
ACACGTGCCCCGTCAGCAGCTGCCTGTCCGTCAAGGCGCTGCACGGCGTG
TCCCTGGTGCTGTCTGCTGTCGAGACTGTGCTGTCTGTGGTCTGTGTGAT
TCTGGGCTGTGTGGGGATATGGTCTCCTCAGGTAAGCAGAGTGTTGTACA
TGTAGGGTAGTCACAGAGTGCTGCATGGCGTGTCTATGGTGCTGTCTGTG
GTGTGTGTGATTCTGGGCTGTGTGGGGATATGGTCTCCTCAGGTAAGCAG
AGTGTTGTACATGTAGGGTAGTCACAGAGAGCTGCACGGGGTGTCCCTGG
TGCTGTGTGCTGTCGAGACTGTGCTGTCTGTGGTCTGTGTGATACTGGGC
TGTGTGGGGATATGGTCTCCTCAGGTAAGCAGAGCGTTGTACATGTAGGG
TAGTCACAGAGTGCTGCATGGGGTGTCCCTGGTGCTGTCTGTGGTCTGTG
TGATACTGGGCTGTGTGGGGATATGGTCTCCTCAGGTAAGCAGAGCGTTG
TACATGTAGGGTAGTCACAGAGTGCTGCACGGGGTGTCCCTGGTGCTGTC
TGCTGTGGAGACTGTGCTGTCTGTGGTCTGTGTGATACTGGGCTGTGTGG
GGATATGGTCTCCTCAGGTAAGCAGAGTGCTGTACATGTAGGGTAGTCAC
AGAGTGCTGCATGGCGTGTCCCTGGTGCTGTCTGTGGTCTGTGTGATACT
GGGCTGTGTGGGGATATGGTCTCCACAGGTAAGCAAAGCGTTGTACATGT
AGGGTAGTCACAGAGTGCTGCACAGGGTGTCCCTGGTGCTGTCTGTGGTC
TGTGTAATTCTGGGCTGTCTGGGGATATGGTCTCCTCAGGTAAGCAGAGT
GGTGTACATGTAGGGTAGTCAAAGAGAGCTGCACGGCGTGTCCCTGGTGC
TGTCTGCTGTGGAGACTGTGCTTTCGGTGGTGTGTGATTCTGGGCTGTGT
GGGGATATGGTCTCCTCAGGTAAGGTTTCAGAAGTGCTAGATATATACAT
GTACCAGCAAAGTTCTGTAGTTAAGAGACTCACGATCAGTCCTAATGGCA
TGTGGCTGTCTGTAGTGATAGCAGGATGCATCTAGCAAGGTTGTATAACA
GTTGTAGATATAGATAGGGGAGTCACTCCTTTGTCTGTGTAGCACCCCAG
GTATGGGCAGATGAAATTTTAAGGTGAAAAATATCAATATTCTACATGTA
CTTTGTGTGTAGATCATGCAGCATGTTTAACTTTAAAACTATCAAGAATC
ATCAGCGTCATCATCGGTCCTCCTCGTGACAAGGTGCAGCAAGTGAAGTT
GCTTCTCCAGAACTGCTGGTCCTTCATTGCTGAGACAGTTCATGTCCTTC
TAAGTTAGTTTCTGTTTCTATGAGTTTCTTTAGTGTTATGATTGGTCAAC
CAATCCTTCTATTTGTGTCAGAGGTCTAAAACAAGAGACTTCATAGCTTC
ATCAAGATTTATAGGAGCTGTAATCAACCTTATTGTGTTCCCCTCCAGGA
CCACTCGGACCGCCCCCCGCCGTACCCCCAGCAGCAGTTCTCCACTCCCA
CTCAGCAGCCCGTCGTCATCGTGCAGGCCTCACCAGGTCAGGACAAGGGA
AACTAATTATAACGTACACTGTAGAGAGTTTCCATTTCAGTTGTGGCGTG
TGGTGGTATATTCTAGAATCCCACAAGGCTCTTGCCTGTCCTGATAAGTT
TCGTCCTCGTTGCTGAAGAATGTCTTTAAAAACCTGGATAACTGAAAGTA
TGCATACGTCGTAAATCACTGATGCTGCTTTTGTAGCTCTCCTTAAATTC
ATTGTTTAGTGGCGGTATTATGAGAGCAGATGTTAGTTATACCATTGAAG
TATATGTTTGAGAGATAATGATACTATATGATCATGCTCAATTATGTTCA
ATGTGCATATTCTATTAGTTAGCCACATTACTCAAACTCATGTAGAGAAC
ACTGACTACTTCCTTCCGCAGGTGTGCCTGTGTCGTCCCCTCCGCCAGGT
GTGTCCCCAGGTGTGCAGTACGTGTACGTACCTGTCTCCTCGGGCGAGTC
CCTGCACCCCAGTCCTCACGCACACGTCGTGCCAGCTCAGGGGGTCTCGC
CACAGCAGGTCATCTATGCAGGTCAAAGGTTGTCACCGGCTGGACCACAG
GGTCAGGGGGCAAGCTCCCCAGAAGGTCAGGGGTCAGCATCTCAGGGTCA
GAGGTCGGGTCAGGGGACAACTGGGAGAAGAAGAGGAAAACCGGCACCCC
CACCGCCTTACGAGGCTACTGAGGGGGATTTGAGGCAACCACCGATTAAC
CCTGAGTTCTCAGGAAGGGTATGA Coding sequence (CDS) from alignment at Sc0000042:142820..146593+ >Blg00552.0 ID=Blg00552.0|Name=Blg00552.0|organism=Branchiostoma lanceolatum|type=CDS|length=870bp|location=Sequence derived from alignment at Sc0000042:142820..146593+ (Branchiostoma lanceolatum)
ATGGCGATCAACCCCAGGTCCGTGCGTTCCATCGGACTCTCACTGATCGT
GTTCGGGGCGCTCAGCGTGATATTCGGTCTGGCCTCCGACCTGACCTTCA
GCGATGCCTACCTGCACCAGGCCTCCGGACCCATCTGGAGCGGCGTGTTT
GTTCTCATTACGGGTATCTTGGCTGCGTCCATACACTATGAGAAAGGGAA
CAGATGCATTATGATAGCCCTGACCACCCTGGGGACCATGTCCGTCCTCC
TGACCATCGCGTCCTGGATCATCTCCTCTATCGGCCTGAACGGGCGAGAC
ACGTGCCCCGTCAGCAGCTGCCTGTCCGTCAAGGCGCTGCACGGCGTGTC
CCTGGTGCTGTCTGCTGTCGAGACTGTGCTGTCTGTGGTCTGTGTGATTC
TGGGCTGTGTGGGGATATGGTCTCCTCAGGACCACTCGGACCGCCCCCCG
CCGTACCCCCAGCAGCAGTTCTCCACTCCCACTCAGCAGCCCGTCGTCAT
CGTGCAGGCCTCACCAGGTGTGCCTGTGTCGTCCCCTCCGCCAGGTGTGT
CCCCAGGTGTGCAGTACGTGTACGTACCTGTCTCCTCGGGCGAGTCCCTG
CACCCCAGTCCTCACGCACACGTCGTGCCAGCTCAGGGGGTCTCGCCACA
GCAGGTCATCTATGCAGGTCAAAGGTTGTCACCGGCTGGACCACAGGGTC
AGGGGGCAAGCTCCCCAGAAGGTCAGGGGTCAGCATCTCAGGGTCAGAGG
TCGGGTCAGGGGACAACTGGGAGAAGAAGAGGAAAACCGGCACCCCCACC
GCCTTACGAGGCTACTGAGGGGGATTTGAGGCAACCACCGATTAACCCTG
AGTTCTCAGGAAGGGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00552.0-exon-Sc0000042-1570713199:142820..142969 | Blg00552.0-exon-Sc0000042-1570713199:142820..142969 | Branchiostoma lanceolatum | exon |
| Blg00552.0-exon-Sc0000042-1570713199:143691..143750 | Blg00552.0-exon-Sc0000042-1570713199:143691..143750 | Branchiostoma lanceolatum | exon |
| Blg00552.0-exon-Sc0000042-1570713199:144182..144400 | Blg00552.0-exon-Sc0000042-1570713199:144182..144400 | Branchiostoma lanceolatum | exon |
| Blg00552.0-exon-Sc0000042-1570713199:145768..145855 | Blg00552.0-exon-Sc0000042-1570713199:145768..145855 | Branchiostoma lanceolatum | exon |
| Blg00552.0-exon-Sc0000042-1570713199:146241..146593 | Blg00552.0-exon-Sc0000042-1570713199:146241..146593 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:142820..146593 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00552 |
|
