Blg00546.0 (mRNA) - B. lanceolatum

Overview
NameBlg00546.0
Unique NameBlg00546.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:1750995..1757406-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00546.0 ID=Blg00546.0|Name=Blg00546.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6412bp|location=Sequence derived from alignment at Sc0000042:1750995..1757406- (Branchiostoma lanceolatum)
TGACATCTGAAACTAAATCCTGTTCCGAAAGTGAGGCTGGAGCCTCGCTC TGGTTCAATTAGCTCATTCCAAACGTTCAGCAGGTGTTTGGTTCAAGGCG GGGCGATTTTTCCACATTTTCCGTCCAAAATTCTCTCCGATTCCGAAGGA TTCCCGCCCGACGCAGACATGGGGTGCCTGTGTTCACACCCCGAGGAGCC GGCGGCGCCAGAGGAGGAGGCGCCGAAGGTGTACAGCTGGGATAGACGGG ACAAGGTGGACCCAAAGGACTTCACCATAGCGAACCTAAAGGTGACAATT ACATGTTCACACCTGTGCACAGACGGACAGGTGGAGGGTTTTCTGTTGTA AAGGTCAAGTTCGAATCTTCAAGGTCGTGACACTGTACTCAAGTGCACCC AGTTATGTGTCTTATTCAATCTCTACACTCGCCCTCTCCCTCAGGCTCTT TTTGTCTGAGATCAAAGGAAATATATCTAAATTTGGACTGATTTTCCCTA GCCTCAACTCAAATATACAGATTTGCTGATTCTTGTATCGTATATTGAAA CTTGTTGTGATCCGTTCCGCTCATGCATTGCTTTCTTTTGTACTTTCTGA GAGCTGACTGCAAATTATGTACTCAGGTAGTTTGCTTTGAGAATTCCAGT CGCTTTTGTATCTGTTGCATATAGCCTAGGTACCATGTGAGTTTATGCTA GTATACTGTAAATGCAGAAATGTTCGCAGTGGCTTTATGTCAAATACTGT AGCAGTATGTGACTATATCGCTGGCTTTATGTCAAATGCTGCAGCAGTAT GTGACTATAGCGCTGCCGCGAACTTGAAACCACCGCGAACACTTCATTTT CCTCTTAGCATGAAATAAAAACCATGTGAACTTAAATGCATTTACAATGC TCTCGCTGCTACTAGTAACTAGAATTGTATCCATATACAGGCTATCTGTT GTTTACTTGGAAATTGGAGTATATGTCATTGTATTATACCACAATTGCAA TATGATGACACTGACTGACAGTGTGTTGTCTGTTCTTGCCTTGTTGTTAC CAGGATGAGACGGTTGGTCGCGTACCCGGCACCGTCAACGGCCAACAGTT CATCATCCAGGACTGCGAGAACTGCAACATCTTCATCTTCGACCACGCGG CCACGATAACGATCGACGACTGCGTCAACTGCCGCATCTTCCTGGGACCC ATCAAGGGCAGCGTGTTCATCCGCGACTGCAAGGACTGTAAGTGCATGTT CGCCTGCCAGCAGTTCCGCACGCGCGACTGCAAGAAGATAGACTGCTTCC TGAGCTGCGCCACCCAGCCCATCATCGAGGCGTCCACGGGAATGAAGTTC GCCTGCTTCCGGTACTTCTACCCCGAGCTCGAGTCCCAGTTCGCCGCGGC AGGGCTCAGCGTGTTCAACAACAACTGGAGCAACATCCACGACTTCACGC CCGTGCCTGGGGAGAACAGCTGGGGGCTTCTCTCGGAGGACGTCAAGGTC GAAGACTGCCTGCCGAATCCCACCACGGAGCAGTTCCAGGGGGTCCAGAT CTCCACCCAATCGCAGGACAGCGTCATCCCCATCACAAGAGGCTCGCGGC GGAAGACGTCGGACGAGTCGTGTCTCGTGGTGTTCTTCTCTGGCGACGTA GACAACCGCGAGCTGGCCCGGCGGTTTCTACAGAAGATGGGCCAGGAGGC TGCGGGTTGTGCCTTGATGCAGACGAAGGAGATCAGTATGACAGGGGACG ACGTGAGACGGGTGTTTGGGTCATCCGCTGAGTTGGAGTTATTTGTACAA GCAGCTCAAAGAGGTGAAGAAGTGCTCCTTGACCTTTGTAGTTTGTGATT AATTTAGACTTAGTGCGCACATTGCAATTCTGTGTTTGCCTGTCAGCCTC GCTTTTCACATCCTCGTCCACCAGGACCTTTCCGCTCTACGTTACATCGC TCGCGGAAAGGGCCCTGGTAACACGGGATGGCATCCATGGTTATTGCAGG TCGAGCATCCAAAACAGCTTCAGCCAATCAGAGGGGTTAAAACCCATTTG CTTCCACTCATCGGAAGCAAACGCGCAAAGAACGCTGGGAAGCTATCAAC CAATCAGGTTACGTGTTACGGCTAGCTCATTAATTATTTATGAGCTACAA CTGCCGTTTGTCCCAAATAAGGGTTAGCTCATTAACTATTCATTAGCTAC AACTGCCGTTTGTCCCAAATAAGGATTAGCTCATTAATTATTCATCAGCA AGTCTCGTCGACCTGCAATAACCATGGATGCCATCCCGTGTTACCAGGGC CCTTTCTGCGAGCGATGTAACGTGGAGCGGAAGGGTCCTGGTGAACGAGG ATGCNCCTTTTCCGCGAGCGATGTAACATAGAGCGGAAAGGTCCTGGTGG ACGAGGATGCGCTTTTCAGTGAGATCAGGATTGTATAGTAGTATTTTTGG GACGGGTCCTCCGCTGAGTTGGAGTTGTTTTTATAAGCAGCTCAAAGAGG TGAAGAAATGGTGCTTGACCTTCTTTTGTTTGTTTTCAAGAGCCTTTATG TATACAAAACTAAAATTGGCCTGCTGGCTGCTTTTCGTTGAGGTACCAGT CATGAGGGAAAACAGAAGGGTCAGACAAAATATAACAATCTAAGATAGAC GACATGATGATCATGTCCTAATAAAACTATGAACATGTCCTTACACACAC ACACACATACCGATATATTGATACCATCTTCGGTAAAGGATTCACTGCCT AGAGTATCCCAGTACATGTATTACAAAAATAAAAGATGGGTCTGGTTTTG CATTCAGATGGAGACGCAATCTAATCTTGAAAAGAGGATGCAGTACTTTC TACTTAAGCTAGGGGGCACTGCAAAGGAGTGACCTCAGTTAAACTGTGAC AGGGCTCGAAATACTGGGTGCATGTGCACCCAGTGCACCCAATTTTGGAG CTGTGCACCTAATCTGCTGTGGGTGCACTGGTGCAACCAAATATTTTTGT ACGGTTTAATGTGTAAAGGTATCCCTGCACACTAGTAGACAGCATATTAT TCTTGACATCTAAGTGTAAGAAAATAATACAATCTTTATTGTAGTATTTG TTTAAGATTTTGATGTTAGAATTTGAGTTAATTTCGATTTTGAAAGCTTC AAAACTGCGTGCCGAGATCGCGTGCCAAACGCGCATGAAGAGGAACAGTA AGGTTTGTCATTAGGTTTTGCTTACAATAGTTACTTGCTACTTTATTCTA TGTGGTGCACCCAAAAATTTTTTGGGGCACCCAATTTTTTAGGTTGGGTG CACCAGTGCACCTATTCCCAAAACTGAATTTCGAGCCCTGCTGTGATGTT AAGAAAATAATATATTTCCCTATATCATCTACAGGGGATGAAATTTGAAT ATTTGTGACATCTCGAAATGACATGTCTTACATTTGCTTGCTTTCTACAT GTAGATTAACAGCAGGTTACTGTAACACAGAAAGAATTCTCCTTCTGTTC TTTGGTATACAACTGTCATAACAATTCATTTTCCATTTCTTTCCAGGACC AGTGATTGGAATTGAGTACAACGGAACCAACAGCGTGCACTCTTGTAAAG AAAACGTCCAAGCCGTGGTGGGGAGCGTCGCTGCTGTCGTCTACACCTCC GACAGTCCGGCCAAGGCGGCGACGGACGTAGACAACTTCTACAACTTTGC TGACATGCAGATGATGTAGACATTGCATCATTTAACCTTCTCTCTGCTGA AGCAGCCTTTTGGCACAAAATTTGTATCGGCTACAGGGTTAGGCAGCAGG GAGAAGGTTAAGGCCACACCAATTTATTCCCTTGATAATTTCTCTAGTAA ACATCTAGCAAGAGGTCTCAGGATGCAGACAGAAGATTGGAAAGTGATGG CAACCACTCGTATTATCTTTATTCGTATTCAGATACATAGTACAGATACA AATACAGAGTATGGTGACCGTGTCAATTGACACGGTAGCCTTCGCGTGAA TTTGTTTAAGGTGGATGACAGGTTGCGAATCTGAGACCCACACACTTTGG GCATCCGCCATCTCCAGCGGCACCAATTGGAAAGTAAATCTGAAGTGTTC AGGGAAAATTCTTTGACATGACCTAGTGAAAAGTTACCAGGCTGATGTTT CTGTAACTTTGAAGCTACCTTAAGGCTTAAGTTTCCTCAGGGCCATATAT TTGGACTCTTCTTAATATATGTATGGTGGCATCACAACAAGGATTCCATC CCAAATTGTTCCAGTTTAGATTTTTTTAAAGTCCGAGAACCGATGTATTA AATTGGTGTGGCCAAACAAAGAATATGCCTCAGTAGACTTCTCCAGATTC CATGTTGTCTACATGTATGTGTGTGTGTGTGTGTTTCAGATTGTGTGTAG AGATACAGATAAATACTAGTATGAATACAAAATGTACCTTCTCGTCAAAG TTGCTGAGAATAATTGGCAAATATATTTTGTAAGGATCGTATTTGGCTCA GTGCTTGACACACAAAGTCTGGCTTCATTACGTATGTAACAATTTCCATA TCTTTAATTAGTGGAATTTTTGAAATCAGAGTCTACTACAATGTATTTGT ATGAATTGATATCGCTATGTACATGTATGTCGTGTATGGAGCTATTTACA AATGTTTTATTTTGCAATACATGTATCTGATTCTCTGTAGTCTGATATAT ACGTACAGATGGAAGAAAAGACATCAAAAGATTTGTATTTGTGGAATTAG TAAATTATGCTATACCATAGTTCTGTAAAAAGAAAGATCAACTTTTGCAT GGCTCAAAATACCCACCTGTTATTTGAAGAAACTTTCTGGATGGCGGGTA AAAAATATAGACCACTTGCAATGTTGCAGGGTGAAAGGATTTTATGTTTG GTGTTATGACTCACAATTTAGCCAATTCACAGAAACTAGAGCTTGTGATG TAGTAGGGCTGGAACAATGTCTTGGGTATTTGTAAGGATCAGAAAGTTTT TCCTGATTTCAGATAAAATTTCTTACAACTTACATTATATTAGATAACAG AAAGACATATTTTGAGTCTTGTATTGTAGTGTATGTGCCCCAGACAAGAG AAGAGGGGATGGATATGCTATAGTCCGACAGTAGTTTAGAGATACCATAG CACGCTGACCGTTTTAAAGTTGACATGCCACAGCAGGCTTGTTTGTGAAT GATGTGTCTTTCAACATTTAGGTGCTTTAGTGTTCAGGGCTCGAAAACTA CAAATGCCGGTACGATTGGAGTTGTAGAGGTATTGGTCAATATACTGGGT TTATATACTAGGTTTATAATATAAGTGTATGTGGATATTGTTTGCTGTAT TGACTGATCACATGTAAGGTAAATCTGTCTGGTGCTGGTGATTTTTTTTA GATTTTCGTTTTCATTTTATCACTTCATCACAAAGCAAGGGTCATTGAGA GCCACTCAAATGTTTTGGGTTACACAGACTGAATTTATAATTTTCAATAT ATTCCAGTCTTGTTGGCTTTAGTCAGCTTCCAATGGTCGCTACTCCATTG AAAATGGACTAAACTGACAAGCATGGACTCCAGATTAGATTTTTAATGTG TGCTGCACTAGTACTAGTACAGGTATGCAGAAAAATGGAATTCAAGCCCT GATGTTATAATGTAATGTAAAATAACAGGAAAGACCTGTGTAATGGGACC AAAGTTGTTGAAGACCAGTTACAATCATTCCTTGAGATGTTAGCCAAAAA TAAAAATTATAATTTCTGTAGGATAAGAATTAGAGCATTGACTTCTCAAC AGGGACCACGTGCCTTTATGGTGCTTCATTGTTTGTCAAGTTTCACTGAG AGTTAGATGAAATGGTCTTATGCAGATACTGCTGTAAGAAGAAGACCCTA AAGAAAGCTATAATGTAACAATTGAGTATGCCATTACATACATTTACGTG TAGATACAGATAGCTAACCATTTGAAAGCCTTAATGTATGTGATGAAGAG TATATACTAGTAGCACAAAAATTAATACATTGCATCACTTTATCTCAATT ATTTTGTTTTGCTAAGTTTTTGAGAGAAATGTTTTATGAATATTTGTTAC TTCTCTGAAATATGAAAGCCATTCTTTTGTTATTCCCTTGTCTGCCTTTT TCTTTCAGGAAAAACAGAAAACATGTCTTCTCTTAAGGAAAATAAAGTTT CCTGAATATGTATAATCTGTGGCCTATGATTTTATATATGTGTGTCAGCC CACACCTATATTAGGCTTAGCTGTCTCACACATTTTAGTTAGCTTCCTTT CAGACTTTTGTCACCAAAAACGTATTATTACATGACTGTATATGGCAAGA TGTAACTGAAAAATGATGTAGAATTTAGATAACATGAATATGCATTGGCT ACATCAATCTAT

Coding sequence (CDS) from alignment at Sc0000042:1750995..1757406-

>Blg00546.0 ID=Blg00546.0|Name=Blg00546.0|organism=Branchiostoma lanceolatum|type=CDS|length=1056bp|location=Sequence derived from alignment at Sc0000042:1750995..1757406- (Branchiostoma lanceolatum)
ATGGGGTGCCTGTGTTCACACCCCGAGGAGCCGGCGGCGCCAGAGGAGGA
GGCGCCGAAGGTGTACAGCTGGGATAGACGGGACAAGGTGGACCCAAAGG
ACTTCACCATAGCGAACCTAAAGGATGAGACGGTTGGTCGCGTACCCGGC
ACCGTCAACGGCCAACAGTTCATCATCCAGGACTGCGAGAACTGCAACAT
CTTCATCTTCGACCACGCGGCCACGATAACGATCGACGACTGCGTCAACT
GCCGCATCTTCCTGGGACCCATCAAGGGCAGCGTGTTCATCCGCGACTGC
AAGGACTGTAAGTGCATGTTCGCCTGCCAGCAGTTCCGCACGCGCGACTG
CAAGAAGATAGACTGCTTCCTGAGCTGCGCCACCCAGCCCATCATCGAGG
CGTCCACGGGAATGAAGTTCGCCTGCTTCCGGTACTTCTACCCCGAGCTC
GAGTCCCAGTTCGCCGCGGCAGGGCTCAGCGTGTTCAACAACAACTGGAG
CAACATCCACGACTTCACGCCCGTGCCTGGGGAGAACAGCTGGGGGCTTC
TCTCGGAGGACGTCAAGGTCGAAGACTGCCTGCCGAATCCCACCACGGAG
CAGTTCCAGGGGGTCCAGATCTCCACCCAATCGCAGGACAGCGTCATCCC
CATCACAAGAGGCTCGCGGCGGAAGACGTCGGACGAGTCGTGTCTCGTGG
TGTTCTTCTCTGGCGACGTAGACAACCGCGAGCTGGCCCGGCGGTTTCTA
CAGAAGATGGGCCAGGAGGCTGCGGGTTGTGCCTTGATGCAGACGAAGGA
GATCAGTATGACAGGGGACGACGTGAGACGGGTGTTTGGGTCATCCGCTG
AGTTGGAGTTATTTGTACAAGCAGCTCAAAGAGGACCAGTGATTGGAATT
GAGTACAACGGAACCAACAGCGTGCACTCTTGTAAAGAAAACGTCCAAGC
CGTGGTGGGGAGCGTCGCTGCTGTCGTCTACACCTCCGACAGTCCGGCCA
AGGCGGCGACGGACGTAGACAACTTCTACAACTTTGCTGACATGCAGATG
ATGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00546.0Blg00546.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00546.0-exon-Sc0000042-1570713199:1757116..1757406Blg00546.0-exon-Sc0000042-1570713199:1757116..1757406Branchiostoma lanceolatumexon
Blg00546.0-exon-Sc0000042-1570713199:1755594..1756353Blg00546.0-exon-Sc0000042-1570713199:1755594..1756353Branchiostoma lanceolatumexon
Blg00546.0-exon-Sc0000042-1570713199:1750995..1753860Blg00546.0-exon-Sc0000042-1570713199:1750995..1753860Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:1750995..1757406 -
Properties
Property NameValue
GeneIDBlg00546