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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:994890..1001245- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00541.0 ID=Blg00541.0|Name=Blg00541.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6356bp|location=Sequence derived from alignment at Sc0000042:994890..1001245- (Branchiostoma lanceolatum)
ATGGTATTTTTCACCCCTCAAGGCGGCGTTGAGGTCACCACCACGTATGG
AGACGTCAATGGGGTGGAGTTCCCAACCTCCTCCATAGGGGGCGCTGTGT
TTGACCGGATCCACATCTTCAAGGGGATTCCTTACGCCGCTCCACCTGTG
GGGGACCTCAGGTGGGTCTTATGCGGTGGATCAAAGAAACCAATCAGCCA
AGGAATAAACAATGAAATGATAAATGTCTTTTTTATCAAAAATGACGCTG
AAGTTCTCTCAATACGTTGTGGATACGAAAACCTGGCCTGAGCTTTATGT
TCATGTTTATGCATAATGGCACGAGCCTATAAAATAGACACTAGATATCA
AGAAAAAAATGAATCGGCTGTTTAATGTTAGGGGTTCTCCATGCACGGGA
AAAAAGCCGCACTTTGACTTTGTTATAAATCTCGTAGCCTTTTGCAATAG
CCCCCGGTCCCAGTGGCGCCCCCTGACTTGTCACTTAGTCGTTCTAGTGG
GAGTGGAGTTTGGCAGCCATGGCTGTATATCTATCTTTCTCATCCAAACC
TACAAATAAAAGTAGAATAAATGACAAACATCCCTGTTCCCAGATGGCGT
CCTCCTCAGGACCCGGCCGGCTGGACGGGCGTCCGGGACGCCACCCAGTT
CGGGAACCGGTGTCCGCAGGTCGTCGACATGCCGTTTCCGCCAGGGTCAC
CTCTGTACGACCTCACCGCCTATCGCAGCAACAGCAGCAGCGAGGACTGC
CTGTTCCTGAACGTCTATACGCCAAACGTGTCGTCCGCCGCGGATCTGCC
GGTAAGTAGGCGGAGAGAGGGAGAGAATTCACAGAGAGAGAGAGAGAGAG
ATCCTAAAGAGGAAGAGACACACAGAGATATGGGAGAGGCAGCGAGGAAA
AGAGAGAGGCAGAGAGGGTGAAAGAGAGAAAAAGACATGCCATTGGAGAG
AGAGATAGAGAGAAAAAGACAAAGAGAGACATACAGAGAAAGAATGGAAA
AGAATGGAGAGGGATAAAGACTTGGAGGGAGAGACTGGTACAGGGAGTGA
GGGAGGGATAGAAAGACAGATACAGAAAAAGAGAGACAGACATACAAAAG
AAAGGGAAAAGAGAGAGGAGGAAGAAGAGACGGAGAGAGACAGAAAGAGA
GAGGAATGGTTTAGCTACACGGAACTGTAACTTACCAGTTCTGTGTTGTT
TGTCGTTGACGTTGTTATGTGTGCTGTCCTGTCCAGGTCATGCTGTGGCT
ACACGGGGGAGGCCTGGCGTTAGGCACTGCCGACTCATACCCGGCCGAGA
TCCCTACGTCATTCCATAACGTCGTCATGGTAACCATAAACTACCGGCTG
GGCAACCTGGGCTTCCTGCCGACCGGAGACGCCGAGACAGACGGCAACGT
CGGGCTTCTGGACATGGTGGGTTTTACGTGTAAAAGTACTGCTACCGTGA
AAAAAATAAACGTGTAGGGGGTACGTGGTCATCTTGATCTTATAGCATTT
GCTTGAACAGTTTGGTGACGGATTTCTCAATCTTATGATCTTTTTCAACA
TAGGCAAAAGCTCTCCAGTGGGTTCAGGACAACATCCGGAACTTCGGAGG
GGATCCCGACCGAGTCACCATCTTCGGCCAGTCCGGCGGAGGCTGGGGCG
TCTCCCTGCTCGTCATGTCCCCGGAGACACGCGGGCTGTACCGCCGGGCC
ATCTCTCAGAGCGGCGTGGCCGGGCTCGGGACCAGCCGGAGAGGAGACCT
CACAAGAACAGAAACTCTCGCTGCCTCGGTAAACTGCACCACGGCCTCCT
TCGATGAGATGATGAGCTGTCTGCGAGGGTATGTTTCACATCTCCGTTAG
TTCGTTCGTCCTGTCGTTCTTTCAGACCCTTGTAGGGTCTAGTGCAAGTT
GCACATAGGGCAGCATGTTTCCTGGCTGATTTAGCTACGCCCGTCTCTGA
TTCCTAGCCACATGCATACAAATACTGTACAATACAACAGTAGGGTCTAT
GTGTACATGTCAATGTCCATGCATGTTTAATATGTTGCAAATGTTGAAAA
CTGTTTTCCTTATAATGGACATACATGTACAACATTGATTGTTTTTAAAC
AAGAGTTTTTCTCGTCCACAGCAAACCAGCCAAAGACCTGCTGTACCTTG
ATATTCCAGTGCCGATATCTGGAGGACGTGAATTACCAGCAAACGATCTA
TGGGTAAGTTTTCCTTTCAAATCTTGTCCTGTCTCACGGCCCTGTGTTGT
ACAGTAATNGTCTCACGGTCCTGTGTTGTACAGTAATGGCCCGGTCACGT
GCGTCGTACGATCGTCGTAAGACCGCAAACTGACAGCTTTAACGTGCTCC
GGAAGTGTGAACTCTATACCTAAATAGGTACTCAGTTGACCTGAGTCGAG
TAAGGAAGCACTAGCACTACATCAGGGTGGGTTAATTAAGGGGATTTGAA
CCTAGTACCGCTGGGTTCTGGGCCAAACGCTCTGCCGTTATTCCACGCGA
CGTCTTTACGTCCCGCCTGAGGGAACCTCCCGAACAAAAGCTAGGGCATT
TTAATTGAGTCGACCTAGGGAGGAAATCGGTGTAAAGTACCCTATCTACA
AGTCCACAAGATGCCAAATAACAGTTTATGTTCCAATCCAGGACCTGATG
TACAAGAAGCAGGTTAACGAGGTAGACTACCTTCTGGGAACCACCGACGA
CGAGTTTGGATACGCGCAGTTAGCCATAGTCCCGGAGGTGACTGCGGAAG
GGCTGAACAGGACTCTTCTGCCGACTATTCTGCCGGTCCAACTGAAGATT
TTTGCCGACCAATTCCCTGTAAGTGCTATACCAGATATTCAACTTGTCGG
TTCTTGTATTTCAACATTTAAATGATGAGCATGAAACTTGAGTCTGAGGG
GAAAGTCTGAGCGGAAAGTCTGTACTTAGGTACACACAGTTTCAGGGAAT
GTATGTACTAGGCAGATACAGGTTTTCCTTCCGACCCTCTGTTTTTATCT
TGTCCTCTTGCTGAATTGCAACCTTAAAGTCTCTGAGAACCAAGGGCTCT
GTTGAGCTCCTTCCATGCAGGAGCCTGATCAGTTAGAGGTTTGCTAGAAG
CGTGGCTTAGTCAGTCTGGCATCCACACTACACCGACGAGTGAGCATTCG
TCAGCTAATTTTGGTGAAACTGTTTTATCCCCATGCAGGACGGCGATGTG
AGCGCCATTGTCCAGCCGGTGATAGACCAGTACCTGGACCCGGACAACGA
CGACCCGAGCTACACACGTGACCAGTTCATCCAGCTGATGACTGACAACC
GGTTCACCGCAACGACTGTACTGATGGCGCAGGCCGCGGCGGGTGAGTGA
TCGGTAGACTGATTCACAAGCCATCCGTGCATTCTCTACATACACGGCAA
GCAGTTGTATTTCTTATTGGGTGGGCCGATTACACCAGCTGCAGAAACGA
CACTAGACCGGAAGATGGTCCGACATTAAGGGTTTATTGAGGTACGATGT
AAGACTCTGAGGGGCCCGTCTAGGAAGCTCTCCGTTCGCAAAGAAACCTA
CTACTGAGGAAAATGGAGTGGTGGTTGGGTGCAAAAAAAGGGAGTTTTGG
CGTCGTGTTGAACGTGTCTCTGCCAAAGGCGTGCAAAGTGACAAGTACGA
AGTCACGCATTCTGGTGACCGGGCAGCCTTGTTATGCCCCGTTTTCTGTC
AACCTGGTGGAGAGTGCCGACAGAAAACGGGATGATGATAAAAAAGTTAC
AATCCTCTCCACCAACCTCTGCTTGGAGAGTAGCAATCGCCGCATGATCA
CTCCCGGATGCCGCAATCCTGAACCGACTACTTGTTTTAAAGGCGACCCT
GTGGGGTTAATCTACAAGCAGATGTATAGGTCTTAAGTGTTTTTGTGGTC
TTTTCTGCGTTACATCTGCTTAATGCTTAAGATTTAAAACAAGCCGGAGC
CTATCCTCTGCTTGGACATTACCTAGTACCTACCTAGTCCATTGACCTCC
GAGTCGTTGGGGGTGACAAGGTAGCAAGGAAGATGGACATTAAAACAGAC
TAACTGACCGACATATTTTGCACCACAGCCATTCCTCAGTAAGACAGCTN
GTCGTTGGGGGTGACAAGGTAGCAAGGAAGATGGACATTAAAACAGACTA
ACTGACCGACATATTTTGCCCCACAACCATTCCTCAGTAAGACAGCTGAA
GTCGCATAGTTCACACTTTATCTTACCTGTCATCTTCGTTCTGAAATGTA
AACGTTCTCTCACTCCCTCACAGCGCACGACTCCCGGGTCTATCAGTACG
AGTTCCAGCACCGCACGTCGGTCTTCCCGGAAAGACCTCCCTACGTAGGA
GCAGACCACGGGGACGACCTGTTCTACATGTTCGGGATCCCGTTCCTGCG
TGACGTCACTGGCAACTCCTGGAAGTACGACTTCAGCGTGGAGGAACGGG
AACTGAGTCTGGACATGATGGCGTACTGGGTCAACTTCGCCACCAACGGG
TGCGTGGATTCATGTTCTTTGATGAACACAAATCTGACTGAACTTCATTT
GAAAGGAAAACAGGAAACCTTGTTTCAGTAGTGAGGTTAGGCAGTTCGCT
AGTAGTCCGCATAGCCTGTTTGTGACTTGAGTGGTGCGGTTCAAGCTTGG
AAGGGATTGTAAGGTTTGGACAATTTAAGACTTATCCTGTCTGTATCGAT
TTGGCTTTGGGGGAGGATGATTGAAACTTTTTGTCTTGATTTCTGGCTTT
CAGTCGACTTTTTGCACATTAGATAATGAGATGTAAGGATCAGTCTCAGA
GTTTTAGGCTTGCTCTAGAACACGCGCAAAACGTTGAGACNTTGCGACAC
TTAGAGTGCCTTTCTGGTGTTTCTACGCTTCGCCTGAATGTCGCAAGAAC
ATGCGCAAAACGTTGAGACTCCACCGGTACTTAACGTCTGCTTGAAGATT
AAATTTGATGGCTAGGTATTAGAAAGGCACGTTTATATAGTCGTTGAAAT
TGCTAGATAATCGCTTCATTTGTTTGTCGGTTTGTTTGTTTGCTTATTTT
CTCATTCGAATTCCTGCAGAGACCCCAGTGACTCCACCGGAGCAGCGCGC
ATGCGTGACCTGGTGACCTGGCCACGCTACATGACGTCATCCCAATCCTA
CCTGAAGCTGGATGTGACGTCATCTGCTGACGTCAAGATCCGCGAGTCCA
ACATGAAGTTTTGGAACGAGGAGGTGCCGAGGCTGATGGGAAAGGAAATC
ACCACTGGCGGCGGTGAGAAATCTACGTGGAGCCTTTCGCTTGTAGCGTT
TTCAGCTGTGCTGTATTTGCTACAATAGGGCTGACCCTTTGTGATTGGCT
GAAAGCGCGAGCCACAGAGAAGCATTCTCCTACGCAGAGCCGACCCCACA
TCCTTTTTATAACCTCTACCAGGCTCCACGGATGGCCGGAGTAGAAGTTG
GCCAAATAGAGTGACTAAGGGAGGGTCCAATATGCCATCCTAGATCGGTA
AAAACTGTACCCCTATAGCAGACTAACTTCTCTTTTATGTTTTTCTGTGT
AATTCGCCAATTTCTACTCTTTCCAGCCGCCGCTAGAGCCTGGTAGAGGC
TAATCCTTTTACTCCTTAGGTGAGACTGAGGTTTTCCAGGCGGTGGTCTT
CACTTTAGGGGGCGTGGAAGATGAGCACCATTTTGTATTAGAATGTAAAA
TATACGATAAAGAGAGAGATAAGCTTTATAGACTGATACGACCTATGTTT
CCCTACTTCTTACAGCTAAGCAATATCGACAAATTTATATATTCAATGAG
TTTAGACAAACCACTGATTATGAACCGTATCTGCTCTTACATTTTTACCA
TTGCGAAGAAGCGAGGGGAAGTCGAATCCATGTATTTGACTGTTCCTGAA
GTAATTGGACAGAGTATAAATGCATCTGCTGGCCCACACTACAAAGGTGA
CCAGCAACTGCTCGAGAGAGTACAGCACAAGGCGACGCGACTTGTTCCTG
GTTTTGCCGATATCAGCTATGAGGACAGACTACGCCGCCTCAAACTTCCA
ACCCTTGAACACCGCCGTAAGAGAGGTGACATGATACAGGTGTTCAAGTT
CGTGAAAGGATTCGACCGTGTCAACCCAAGCCGCCTGTTCAACTTCAATG
TTGACAGACGCACCAGAGGCCACCCATACAAGATGGTCAAACCTCAAGCT
AAGAAGCCGGCCAGGTCGAACTGCTTCAGTGTCAGGTCTGTCAACTCATG
GAACAGCCTCCCCGCGGATGTTGTAGCTGCCGAAACTGTGAACACCTTCA
AGTCAAAACTGGACAACCACTGGAGGGGACTGGAGAATTCGCTCAGCCCA
ACATAA Coding sequence (CDS) from alignment at Sc0000042:994890..1001245- >Blg00541.0 ID=Blg00541.0|Name=Blg00541.0|organism=Branchiostoma lanceolatum|type=CDS|length=2067bp|location=Sequence derived from alignment at Sc0000042:994890..1001245- (Branchiostoma lanceolatum)
ATGGTATTTTTCACCCCTCAAGGCGGCGTTGAGGTCACCACCACGTATGG
AGACGTCAATGGGGTGGAGTTCCCAACCTCCTCCATAGGGGGCGCTGTGT
TTGACCGGATCCACATCTTCAAGGGGATTCCTTACGCCGCTCCACCTGTG
GGGGACCTCAGATGGCGTCCTCCTCAGGACCCGGCCGGCTGGACGGGCGT
CCGGGACGCCACCCAGTTCGGGAACCGGTGTCCGCAGGTCGTCGACATGC
CGTTTCCGCCAGGGTCACCTCTGTACGACCTCACCGCCTATCGCAGCAAC
AGCAGCAGCGAGGACTGCCTGTTCCTGAACGTCTATACGCCAAACGTGTC
GTCCGCCGCGGATCTGCCGGTCATGCTGTGGCTACACGGGGGAGGCCTGG
CGTTAGGCACTGCCGACTCATACCCGGCCGAGATCCCTACGTCATTCCAT
AACGTCGTCATGGTAACCATAAACTACCGGCTGGGCAACCTGGGCTTCCT
GCCGACCGGAGACGCCGAGACAGACGGCAACGTCGGGCTTCTGGACATGG
CAAAAGCTCTCCAGTGGGTTCAGGACAACATCCGGAACTTCGGAGGGGAT
CCCGACCGAGTCACCATCTTCGGCCAGTCCGGCGGAGGCTGGGGCGTCTC
CCTGCTCGTCATGTCCCCGGAGACACGCGGGCTGTACCGCCGGGCCATCT
CTCAGAGCGGCGTGGCCGGGCTCGGGACCAGCCGGAGAGGAGACCTCACA
AGAACAGAAACTCTCGCTGCCTCGGTAAACTGCACCACGGCCTCCTTCGA
TGAGATGATGAGCTGTCTGCGAGGCAAACCAGCCAAAGACCTGCTGTACC
TTGATATTCCAGTGCCGATATCTGGAGGACGTGAATTACCAGCAAACGAT
CTATGGGACCTGATGTACAAGAAGCAGGTTAACGAGGTAGACTACCTTCT
GGGAACCACCGACGACGAGTTTGGATACGCGCAGTTAGCCATAGTCCCGG
AGGTGACTGCGGAAGGGCTGAACAGGACTCTTCTGCCGACTATTCTGCCG
GTCCAACTGAAGATTTTTGCCGACCAATTCCCTGACGGCGATGTGAGCGC
CATTGTCCAGCCGGTGATAGACCAGTACCTGGACCCGGACAACGACGACC
CGAGCTACACACGTGACCAGTTCATCCAGCTGATGACTGACAACCGGTTC
ACCGCAACGACTGTACTGATGGCGCAGGCCGCGGCGGCGCACGACTCCCG
GGTCTATCAGTACGAGTTCCAGCACCGCACGTCGGTCTTCCCGGAAAGAC
CTCCCTACGTAGGAGCAGACCACGGGGACGACCTGTTCTACATGTTCGGG
ATCCCGTTCCTGCGTGACGTCACTGGCAACTCCTGGAAGTACGACTTCAG
CGTGGAGGAACGGGAACTGAGTCTGGACATGATGGCGTACTGGGTCAACT
TCGCCACCAACGGAGACCCCAGTGACTCCACCGGAGCAGCGCGCATGCGT
GACCTGGTGACCTGGCCACGCTACATGACGTCATCCCAATCCTACCTGAA
GCTGGATGTGACGTCATCTGCTGACGTCAAGATCCGCGAGTCCAACATGA
AGTTTTGGAACGAGGAGGTGCCGAGGCTGATGGGAAAGGAAATCACCACT
GGCGGCGGTGACCAGCAACTGCTCGAGAGAGTACAGCACAAGGCGACGCG
ACTTGTTCCTGGTTTTGCCGATATCAGCTATGAGGACAGACTACGCCGCC
TCAAACTTCCAACCCTTGAACACCGCCGTAAGAGAGGTGACATGATACAG
GTGTTCAAGTTCGTGAAAGGATTCGACCGTGTCAACCCAAGCCGCCTGTT
CAACTTCAATGTTGACAGACGCACCAGAGGCCACCCATACAAGATGGTCA
AACCTCAAGCTAAGAAGCCGGCCAGGTCGAACTGCTTCAGTGTCAGGTCT
GTCAACTCATGGAACAGCCTCCCCGCGGATGTTGTAGCTGCCGAAACTGT
GAACACCTTCAAGTCAAAACTGGACAACCACTGGAGGGGACTGGAGAATT
CGCTCAGCCCAACATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00541.0-exon-Sc0000042-1570713199:1001085..1001245 | Blg00541.0-exon-Sc0000042-1570713199:1001085..1001245 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:1000445..1000652 | Blg00541.0-exon-Sc0000042-1570713199:1000445..1000652 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:999830..1000009 | Blg00541.0-exon-Sc0000042-1570713199:999830..1000009 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:999418..999692 | Blg00541.0-exon-Sc0000042-1570713199:999418..999692 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:999043..999124 | Blg00541.0-exon-Sc0000042-1570713199:999043..999124 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:998428..998604 | Blg00541.0-exon-Sc0000042-1570713199:998428..998604 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:997904..998057 | Blg00541.0-exon-Sc0000042-1570713199:997904..998057 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:996747..996972 | Blg00541.0-exon-Sc0000042-1570713199:996747..996972 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:995983..996176 | Blg00541.0-exon-Sc0000042-1570713199:995983..996176 | Branchiostoma lanceolatum | exon |
| Blg00541.0-exon-Sc0000042-1570713199:994890..995299 | Blg00541.0-exon-Sc0000042-1570713199:994890..995299 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:994890..1001245 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00541 |
|
