Blg00540.0 (mRNA) - B. lanceolatum

Overview
NameBlg00540.0
Unique NameBlg00540.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:223773..236653+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00540.0 ID=Blg00540.0|Name=Blg00540.0|organism=Branchiostoma lanceolatum|type=mRNA|length=12881bp|location=Sequence derived from alignment at Sc0000042:223773..236653+ (Branchiostoma lanceolatum)
ATGACGACGCAGTGGGACTGTGAGCGGAAGGGACACAGATGTAAGGTTTC
ATCGTTTACTCCTAATCAATGTGTCGTATTGGGAACAGTAGAAATGTCCT
GAAGTTGCAATGAGTCTTTCTTCAATTTGCTCCACTGCTTCTTGCATCCT
GCTACTAGTGCCTCTCGTAGCTCTTTGAGTATTTTAAGAGGACATAGTCC
TCTGTCTTTGAGGCCTGTCTTCAGTCTGAATGCTTATTACTTTCATTCTA
CGTGTTTCATTGTTCAAGATTGCAACATCTTTTAAATATTGTAAGATTTG
TCGAAATCTAGAGCAATGATAAAGGTTGTTACAACAACAACATCATTGGT
GTGTATGGAGAGCATGTCCGTCCGCTAACAACATCTTTATCCACGGTTCT
AGGGGCCAATGACGGCTTCAGACTGTACAGCGAGACTCACGGGGCGGAGG
AGTTTAAGCAGAAAATGGCCGATCTGTTTTCGGTGAGCACGTATACTGGT
GTCGATGTATTTATCTACTAGTAGCTCCACTTTATTTTTTAGTTGTGTCA
CTTTCGTCTGTATTCTAATCTACCAAATGTAATCTTTGTAAGCAGCTCCA
GTACGCTTCAACAAAACAAGTCTCATCTAGATTCGGCTCTCCGTACCACA
GCTTTTACCAGCTTCGAATGGCCACACAGATCACGTGACCTGACGGACAC
ATGACCTCAGCAATAGGTCAAAAGTACCTGGAAGTTGATACCGTCCGCCG
TCTATGTTGAGTGGCGATTTGCGCGCTCCTCCTTTACAACGTTTGATCCA
GTAACATGGTCATGAACGAACTTCCGTGCTATTAAACATGGTACCGTTAT
CATTGTTATGTGCCACATAACCACCACACTGTTGACTGGCGATTTGCGTG
CTCCAAAATAAATTTAGATGGCCTGCATTATCCCGCTCACCAAGGAGGTC
TCTCTGTAACCTTCTTCGTCTCACAAAGTATTTCTGTTCAGTTTACGATT
AACAACCCTTGTCCTGCTGGATTTCCAGAGCAAAAATATACTCCCACTGC
TGAAGTGCCCAGACACCTTTAGTTAAAGGGTACTAGTTTGATAATGCTCA
TTTTTAGTTACTCCGCTTTACAACAACCGCGCGGATGCAACGTACGAATT
CTAGAAATACCCTCAACCCGACAGTTGTCAGGACTAGCATATAGAACAAG
CATATGGAAATAGACAATTGTCGGGCTCAGCAGGACTAGGGTTGTTAAAA
CTACATGTACCAACAACACAGACGAAATTTCATGGTACTAAACGTTATGG
TAACGTTATGCTTGTTATTTCCCGCAGAACGACCACACCGTCGGGTTCGG
GTCTCGGGTGAAGCTGAGCTGGGACAAGTCGCTGGCGAAGATGTCGGTAA
TTGGCGCGAGCGTGACGCAGGGGAAGCGGCTTCACCCGTGCGCAGTGGGG
GCGGTGAGTTTTTTTGTTTGTTTGTTTGCTGTTTGTTTGTCAGTGAGTAA
GCAGGGCAAGCGGCTCCGCTCACTCACTTCATCCAAGAGGAAGCCCAAAA
ACCACAGCTATGTTCTCATTGTTTTTTTACCAGAGTGGAGTGAGGAAATA
GGCTGGGCGCCAGCCTGTAGCTTTCCTGCGGCCTATAGCCACGGAAGCGA
CCGAGAGAGCTCAATAAAGGCTAGCAACCAGGCTAGGCATAAATTGTCTA
AAACTACTAAGTTCAGAACATTGGGGTCTGCTAGGGAGTCGAACCCAGAA
CCCTTAGATTCTAAGTCAACGACCCTAAAGCCCCCCTCTCACTGGACCCG
CGGAACGCTGACGGCGTCGCTGCGTCCTAAAGCCCCCCTCTCACTGGACC
CGCGGCTGCGTTCTAAACTGGATTTGTGTTACGCTTGACTTTATATTGGG
AATATTATTCAAAACGTACAAGCATGACTAAAAAGACAACAAAACACACA
AAGCTTAAAAAGATTCGTTTTTTGTCGATGGAATTCGTTGAATACTTTGT
CAATTCGATCGGTCGTAGCGACGCAGCCAGCGTGCAGCGGGTCCAGTGAG
ATAGGGGCTTTAACAAACCTCCGACATCTTATAGGCCACACCAATCGATG
ACCCAAACCCCATGGCCATTAGTTACATCACTGCCCCGTCAGTCACAGTG
ATTGACAGCGCTTCCGGGTACAGTCTGTGACCGTCGGGCTGTGTCACGTT
CTGTGCCTGGAAAAAGCACAGAACGTGACGGGCACGGTTTGTGACACTGC
AACCATCTTGCCTCCTCAGGTGGGCACGGTCAGCGTGGTGGGCAACCCGC
AGTTCCCGCCGCACGACTTCTTCCGGGCGGGCCGGGTCTTCCCGCTGCGC
CTGCGGCACTCCAACTACACTCAGACCGACGACGCCGCGTCCGACATCCG
CTCCGTCGCACTCAAGTTCCTGGACGGAGACGAAGGAGGTACGTTCCTGA
CAATGGCATGTGTGCTGTCCCATAGAGCCCTTTTGTTGTTTTCCCTAAAA
GTCCACATCAATCAACCGGAAGATCAACATGAACAGAAGGAAGAACGTCT
GTACACTCAAGTTCAGGGAGCGAATATAGTCAGCTAGATCCTCCTTTCCC
AGCCTGCCCTGTTCATCTTGTAGCTTACTTTTTGAATGTCAAAGAACCAA
AAAAAATGCGCCAGATATAATTACTCAAGCAACTGGATAAAATTTTGAAA
CAGTCAGACGTTTCCAAAACGTACAGGGCGCCGCCATGCGGTCCGCCGCG
AAACTGCAGTGTACTTGACTCTAACACATTATCTGTACCCTGACTACAGG
TCCGCTAGACCTTGTGATGAACACGGGCGCGATCGCGCCGTACTGGGACG
CCGCCATGCGGTCCGCCGCGGAACTGCAGTGCACTTGACTCTAACACATT
ATCTGTACCCTGACTACAGGTCCGCTAGACCTGGTGATGAACACGGGTGC
CATCGCGCCGTACTGGGACGCCGCCATGCGGTCTGCCGCGGAACTGCAGC
GTACTTGACTAAACACATTATCTGTACCCTGACTTCAGGTCCGCTAGACC
TGGTGATGAACACGGGTGCCATCTCGCCGTACTGGGGCGCCGCCATGCGG
TCCACCGCGGGACTGCAGTGTACTTGACTCTAACACATTATCTGTACCCT
GACTACAGGCCCGCTGGACCTTGTGATGAACACGGGCGCCATCTCGCCGT
ACTGGGACGTCCAGGGCGCCGCGGACTTCCTCGCCGCCATGCGGTCCGCC
GCGGGACTGAAGAACTTCTGCGCCGAGCATCCAGTCAGGTACGGGCGCCT
CTTGGTAACCATCATCTATATCTGGGAATACTAGTAGTGCAGTAGAGAGA
TCTAGAAGTTATAAACAACAACAACAAAAAACACGCTCGGTAGTCCGATT
TCTCCCCTTTTGCAAATATCAACAATTAATCTTTTCATAATTCCATCACT
CCGAATTATGAGTGAACGAACCGAATGGACATTCACAGAATCTGGACTGA
AACTGAACTGAAAGAGGAAAAATATTTTTCCATTACAGTTATCTCTTCCT
TAGTCTTAGAAGACCTATAGACATAATAAGACAGGTATTGTGTCCTGAAG
CTCACTGATCTATTACGCACTTCATGCAATCAAAGAAAAAACACTTATAT
AATTTTGTTAATTGAAAATCAACCTTTTCCTCCCTCGGCAGACACTACGC
GCTGATCGACTCCCTGAGACGCGCGCCAAACTCCTTCACTGACCTGACGT
ACTACTCGCAGCACGTCTTCCGCTTCATGGCGAAGGACGGCGAGCGTCGC
TACGTCAAGTACCGCCTCATACCTGACGTTGACGTCCACGAGACGGGGCT
GCTGGACAGGAACGAACAGCCCAAGCCATGGTAAGAAACTGTCGAAAGCC
AAACTGTGAAGAAAATAAAACTGTTGAGAAAAAATGAATTATTGGCCATC
TCTGCTACGTATGCGGCTATCTTCAGGCTCGAATGACCAGTCACTTGGAG
CACGTGACCTTTAGAACGCATGACGTCAGTAATCAGCCAAAAGTGCCGAC
ATTTTGTGGTGTAATAGCTGTTCGACATCACTGTGATTCATATTCTCAAA
AAGGAACAATTATAACCTTGTTTTTGTTAAGCACATGCATCTTTTTTACC
GCTTAAGTGATTGGTAATCCGAACCTGAAGAATACCTGAGTATAGACCGT
CAACACTTGTTGGAAATATAAGCTGCTTGATAGAGTGCACCACATCTATG
TCCTTATCTTTTCGATTAATAGTAATAAAATAAATCAAAATTAAAATATA
GATAAACCGTCTGTGTTCCAGGTACACGGAGCGGGACATGACGGAGCGGC
GGCCGCGCGGCTTCCTGCGGGCGGAGTTCGCGCAGGAGCTGCAGCGCTCC
CTGCTGGAGTACCGGCTGCAGGTGCAGCTGCACGAGTGGGTGGAGGGCGA
CCCTTACGAGATCTTCAACCCCGCCTGCATCTGGGACCCCAAGACGCACC
CCTGGATGGACCTGGCCAGGGTCTGCGTCACCAACCTCCTCCCACAGGTT
GCTATCATTTGTATCTACCACACACAATCGCACATACATAGGATATTGGA
GTGTATTTCACACAACTTGGCAGTAATGCCTATGCATCTTCCTCAGGGCA
TCGAAACGTAAGCAGGTGAGAGACCTCTCTGGTTGTGTCATTGAAGAAAA
CTCCAATGTCCTATGTTATACCAACCTCATGAAATTATCTTCAGTACTGT
ATAACGTTATACTGATTAAATTTTACATATCATGCTACTATACCGTACCC
GGTTTCGTAGTACATACTCGATTGTTATCACAGTTTTTTCGCTTGATGAC
AGAGTTATGTTAAATGTTAGAGGTGCTGCTAATATAAGTTACTTGAGTGT
AGTGCCACTTTGTCCTTGTCCTTCTCTCAATAAGCTAGTTCGGAGTTGCT
ACTACGCATGTGCAGTGTCAAAGGTGAAGGCCCGCCAGCTTGAAAACAGT
GCTCGTCTCGACATTGTCTTGATTTGCATAACAACGTCCAGACGGGTCTT
GTTTACGTCGCCGGGGCCTTCACCTTTGACACTGCACATGCGTAGTAGCA
ACTCCGAATTAGCTTATTGTGTGTCCGTCCTTTTCATTTCATATTACATG
TGCATGCAACTAGCCTCCTGGCAAGAACTTGCAATAGTTAGAAAACTTCT
TTACTCGATTAAAAAGAAAAAAAACAACTCCTTCCTTTATTAGAGCGTCT
TGGAGAGGACGATATTCGACCCATCCACCCAGCCGCCATCTTTGGGTCTC
CTCGAACCGAAGTCCAGCCAAGACCATAATAGTCTCCCGCACCTGACCTC
TGACCTGCACGCCCGACCAATGAGACCGGGGGAGGGGAGGCTGCCGGTTG
ACCTGGCGGAGGGGTCGTACGCGCTGGAGTTCCACACGGGCGTGCAGCGG
GGCGCGGGCACCACGGCGGACGTCTGGATCACGCTCACTGGGACCTGGCT
AAGGACGGACAGGATCAAGATGGAAAAGTCATTCTTCGACGAGTTCGAGA
GGGGGGCGGTCAGCCGCTTCCACTTCAAGTCTGTCGATGTAGAAGAGGTA
AACAGTGTTCTGATTTCCTTAGGTCTCACGTTTTGGGTGCCGAGTGTGGC
GAAACAATTGCTGCATGATCGCTGCGCTTCAGCTCGCTAATTCTGAATGA
CTAGAGATCAGTTGCTATGGGCTATACGCTACAGCATGTGCGTCCTACTA
AGCACGAATCTAAGAAAAGGTAATGACCCAACTGACTTGCATTTACAGTA
CGGATCATAGATTTACGCACACGTGTCGACAAGTGTGCGGAAAGAAGTCT
TAAGGCATAAAATGACCATCTTCGCCCATCTTCTCTGCCCCAGGTTCTCC
TGGTGACGCTTGAGAGCAGCTCGAAGGGGTTCTGGCACGACTGGTACGTG
GAGAACGTGTTCGTGAACGACAGGAAGCGCGGCCGGCGGTACGAGTTCCC
GTGCCACAGGTGGATCCGAGACAGGGTCGTGCTGAGGAGCGGACACGGTA
AGGCGTGAACAAACAAACAAACAAACAAACAAACAAACAAACAAACAAGC
AAACAGACAAACACTGGTGGATCCGAGACAGGGTCGTGCTGAGGAGCGGA
CACGGTAAGGCGTGAACAAACAAACAAACAAACAAACAAACAAACAAACA
AACAAACAAGCAAACAGACAAACACTGGTGGATCCGCGACAGGGTCGTGC
TGAGGAGCGGACACGGTAAGGCGTGTCTAAACACACAAACAAACAGGAGA
AAAAGACTCTTTTTACACAACCAAGGGANTCCGTGAATAGTTTCATCAGG
TTGGTAAGTCACTGGAGAAAAAGACTCTTTTTACACAACCAAGGGATTTA
TTCAACCGACGTTTCGGTGACCCTCTGTCACCTTCTTCAAGGCAATTCTG
ACTGGTTCACATAGCAATGCAGCACAGGTGTTGCTGCTTATACATATTAA
TGAGATGCAAACGCAAAATATTTACATATGTACAAACACAGGGGATGACA
TCACTATGCGGTCCCAAACGTACAGAAGTGTAACACATACACAACTACAT
ATCGATCAACAAACGATGCAACGATTATTTCTTTAGGATGCGGTCCCAAA
TGTGACTGAGTCTATATCCCCCCTCATCACGGTTCATGACTGGAGCGGAT
TTCCTGATCCATACAGACTCCTTAATCCAACGTGTTACTCTATTGTCCTC
TCGGTCTATCACCTTGGCCCCATCCCAGTCTATAGCACAGTTGTTTCTCA
TGATGTGGTCTGTCACTGCTGATTTGTTCTCTTCCTTCTCAGCTACCTGT
TTCTGTGCTCTGGTGTACCTTCCCACCTTGGTGCTCTCAGCTTCTTTCCT
GTGTTCTTCCAGTCTGCATCCAAATGTTCTCCCTGTCTCCCCTATGTATA
CCTTGTTGCAACTCATGCAAAAGCATCCTAAAGAAATAATCGTTGCATTG
TTTGTTGATCGATATGTAGTTGTGTATGTGTTACACAACTACGCATCCTA
AAGAAATAATCGTTGCATTGTTTGTTGATCGATATGTAGTTGTGTATGTG
TTACACTTCTGTACGTTTGGGACCGCATAGTGATGTCATCCCCTGTGTTT
GTACATATGTAAATATTTTGCGTTTGCATCTCATTAATATGTATAAGCAG
CAACACCTGTGCTGCATTGCTATGTGAACCAGTCAGAATTGCCTTGAAGA
AGGTGAAAGAGGGTCACCGAAACGTCGGTTGAATAAATCCCTTGGTTGTG
TAAAAAGAGTCTTTTTCTCCAGTGACTTACCAACCTGATGAAACTATTCA
CGGACACAAACAAACAAAAAAAAAAAAAAAAACAGGGTTGTATTGTCACC
AGTGGAAGGAGACAATACGATTTCTCCTGCAGATGATTCCAAGTCTTATC
ATTTCTGCTGCAATGTCTCACTTCTAGTGGTGTCTTGGACGCCCTCTTTT
AAAGTGAACGGCATCTTTAAAGAAGCCACATAGAGTCAATTCCATGTCAC
CGAGAGGATTTTCAGATGATATTGCTAATAAGTTTGAACAATGTTAGAGA
AAAGACTATTTTAGTCAAAATAATTCCAGACCGTTCAAACAATTAGAAAT
GAAAGTCTGAACATGTTTGAACTCATCTATATATTTTGGAAATATTATGA
AAGTATTTGCACAAATATCTCTTTATTTAGAACAGTTTTCAAACATCTGT
GTGATTGTTCTACTGTTGGAACATGTTCCAACATTTTGCATCATTCTCAA
AATGGTAGATTTGGGTTATTGCCCCCATAAAAGTAGGTGCTAATCANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGA
GGGTTTTCAGATGATATTGCTAATAAGTTTGAACAATTTTAGAGAAAAGA
CTATTTCAGTCAAAATAATTCCAGACCGTTCAAACAATTAGAAATGAAAG
TTTGAACATGTTTGAACTCATCTATATATTTTGGAAATATTATGAAAGTA
TTTGCACAAATATCTCTTTATTTAGAACAGTTTTCAAACATCTGTGTGAT
TGTTCTACTGTTGGAACATGTTCCAACATTTTGCATCATTCTCAAAATGG
TAGATTTGGGTTATTGCCCCCATAAAAGTAGGTGCTAATCACGCTCTATT
GTCTGCCTCTTTATATTTTTAGATTTCACGTCTGGACGCTGGCAACTCTT
TTGTCTTTAAGTGTCTATGCATGGCACCTAGGCCTAATCCCCTATACTTT
GAAGGGATGTGTGAATTGCCCTGTTCCCAGCCCACTGACCCAGTTATATC
ATATTTGTAGAATGTTGGAACATGTTCAAACAAATGATCAATCTATGTTG
CAACAGTTTAGAAACTAATACAAATAATGTGTTCAATGTTGGAAATTTGT
TTAACCTGTTGGAACACAGCATAAAATATTTAGAACATCAAATAGATGTT
GGAAATTGTTCTTAACAGTTACTTATCTCACATAGATTGTTACAAAGGTT
TTGTAAATGTTAGAACAAAAGGCAACAAACACCCTCTCGGTAATGTGGAA
TTGACTCTAGCTTCAACTATAACATTCCTGTTATCATCAGACGATTGGTG
ACACGGTCAACAGCAGTGCCAGTTCTTTTGGTATTGCTGAAAAGTACATC
TGATTTTTTTGTCACCTCAAACTTTTCTTATTCCCGACCCTTCAGCCTGC
CTGAACTCGTACGAGTTCCACGACCTGCTTGCGGCGGAGCGGCAGTTGGA
GGTCCAGGACCGGCAGCGGCGGTACAAGTGGTCCTACAGCATCCCGGGCT
GCCCCGGCCACCTCTACGGCGTCACCAACCAGGACCTACCGCGAGACGTC
CGCCTCATGAACGAGAAAGCGCGAGACTTCGCCACCGCACCCAAACGCGG
AGGCGTCAAGACTTTCTTTAAGCGGGTCTTCGGAATTCTCCGCAGTTTGG
ACGATTTTAAGGACCTTGCCAGGTCCGTAACGAGCGAGATCTCCCCGCAT
ATCATGGAGGACTGGCACAACGACGTAGAGTTCGGGCGGCAGTTCCTGAA
CGGGATCACGCCCAGCGCCATCCGTCGCGTTCGAGGCGGTCTTCCCGCCA
ACTTCATGGTGCGAGACGAGATGGTGCAGGGCTGCCTGGACGAGAAGACG
ACGCTGAGTGAAGAAATCGAGGTGAGTTTGTTGGTAGGATGGAAACAAAG
AGGTGAGTAGAACAGTCCCGGGCCCGCCAGTCCACAGGCCGCACGCCTTA
ACCACTAGACTAACAGGTCTAGACCGGTTAGACTAGTCAGTTGGAGGCGC
TTGAACCCCACTGTTTTCTACTTATACAATCATTTTTGGACATTGAAAAT
ATCATATGCAGAACTAGAACACTTTCCTCATGATCAGCCATTGAGTCCCT
CTTTAGACCTTCATTACCGTAAGTTATTTGGGAAAAACAACATTTGGTTT
GATGTCTCAGAGACCATTTCTTGTTTCTCCTCTCAGGCAGTCGTGTATCA
TTTTGACAACTTCAAACGAACTGGTTTGTCTTCGGACCTTAGCTAATCGA
CGACTGTCCTACAGTTGACTTCTGCGGTTTCAAAACTGTTGTCTACGTTT
CGCCTTCAGCTGCTTCTTCGCTGCCTCTTTTCTTTCCGCTTCGAAGTGGT
GCTAAATTAATAGTTGAAAACCTCCCCCACAGGCGGGCCACATCTACATC
GTGGACTGCGGCATCCTAGATGGACTTCAGCAGAACACCACCATGGGGAG
CTTCTACCTGGCCGCTCCGCTAGCGCTCTTCCACGTCAACAGACTCGGGG
ACTTCCTCCCCATCGCCATTCAGGTATTTTATTTTCTCACGGAGAATTCA
AACCGTTCTCCTACTAAAAAAATGGACTCACCGGAATTTCGGACTGACTC
GGTCAGTCTTCGTCAGCTCTCCGACCCAATCGCTCTGGTCACGTGAATTT
ATACGCATGTGACGTCAGCAATGGGTCAAAGGTTGTTGTTGGAAGTCGAT
ATCGCCCCCCGTCTCGGCTAAGAGAAGGTTGAGATTGGGGACGGTTTAAT
ACATCCGTAATGTAATCTACCAACGTTTTTCTGGCATTGTTAACTTCATG
CCAATTTCATAAGATTACTTGTTGTTGACGCTCTCTTGTCCTTACAACCA
ATAAATGCTGTACTTTTCTTATGTTTATTTCATCATTTATCATGATAAAG
TTTGTTTAAATATCTTCATTCATTCATTTTCATTCATTTTCATTCATTTT
CATTCATTTTCATTCATTTTCATTCATTTTCATTCATTTTCATTTTTTTT
CATTCATTCATGTCCAGATCAACCAGAGACCAGGCAACGACAACCCTGTC
TTCACCAGCGAGGACTCGGACATCGACTGGCTCATGGCCAAGATCTTCCT
GCGCAACGCGGACGCGCAGCTGCAGCTCATCGTCAGCCACCTGCTGGACA
CGCACCTCGTCATGGAGCCGTTCGCGGTCGCCACCTACCGACAGTTGCCG
GGAGTGCACCCGCTGTACAAGCTGCTGGTGCCGCACTTCCGCGGCATGCT
GGGTATCAACGTGTTCGTGCGGGAGGCGCTGATCAGGGAGGGGTCGGTGC
TGGACGGTGTCATGTCGCTCGGGCCGCAGGGCAGGCACGACCTGCTCAGA
AAGTAAGAACTACCTAACTTGCACTTCCACTTGCAAAAACCCTTCACAAC
CCAACAGTGAGACATCTTGATAATTTTACTAGGGACACGTTGATTTAAAA
GTCTGTATTTATTCCTCAGTAAAAGACGCTATCTTTTTTCGATCTTATAC
AAAACCTGTGCTATATATGTGACGCATTTTCTTTTTTATACCAAGCGTTT
CAATTTCGCACATCGTTTTTACAGTGGCTAAGGTTTGAGACACTCACATG
TCATCTTTAATTTTGTACGGTACAGATGTTACAAGGCCTTCAACATCCGG
GCACTGGACCTGCCCACATCCCTGAAGGACCGAGGGTTGGACGACTTCCG
GCTGTTGCCTGGTTACCGTTACCGGGACGACGGCATGATCATCTGGGGAT
GTATCGAGAAGTTCGTCACAGGTGAGAAAATCGCTTTTTTTGCTGTATGA
ACTTTTGGTGACCAATTACTGACGTCACGTGTACGTAAGGTCACACCTGA
TGTGGGCTGCAGTACGGACAGTCGGAAATTCGGCGTCTTTGGGACGCAGT
TGACCTGCTTACAGTTTATACAAACGTTGGTCCACAGCTTTAAAGTTGAC
CTCTGACCGTTCACAGACATGCTGAGCCTTCACTACGATCGCGACGCCGC
CTTGCTGGACGACCTGGAACTGCAGCGGTGGATCAGTGACGTGTACGAGC
ACGGCTTCAACTGGGAGGACAGCCAAGACCGCGGCATCCCGCACAGGATC
AAGTCCTTCCGACAACTGGTGAGAGTCGCCATGGCAACCGTATTACCATG
GCAACCTTGTAACCATAGCAACCGTGTTACCACGGTAATCGTGTTACTAT
GTCAACCGTGTTATCATTGCAACCGTGTAACCGTGTCGCCGTAGCAACCA
TTCTAACCATGTAACCATGCCTTGGAGCGTGGAGTTTTTTTACTTTTTAT
ATTGTATTTCAGAAGCCGAGTTCGGCAAATCGATCCAAGGAATCTTGCGC
AAATCTTCGATCCTTTGGAGTCAAGTTGGATCACTAATTTTGACATTGTA
TTCTCGGCAAAGATAAGATAGCATTGTGACATTTTCAGACACAATGAACG
ATGGTCTATGTGGGTGTGACTGTCAACATCTTCATCTGTGTGCCAAGCAT
CATCCTCCTCCTCCTCCTGTTCCCCNATCTCGTGACGATCATCATCTGGA
CGTGCTCGGTGCAGCACGCGGCGGTGAACAACGGCTGCCGGGACATCCTC
GGCTTCGTGCCGAACGCGCCACTCTGCCTGCGCCGCCCGCCCCCGCCCTG
GAAGGGCATCATCAACATGACGGACATCGTGCGGACTCTACCGNGTGTGC
GTGTGTGTGTATGTTTGTGTGTGTGTGGATGAGTGTGCGGACTCTGCCCG
ACATGGACACGGCCGTGCTGCAGACCAACATCGCCGACATGATGTGCGAG
GAGCCCAGAGACGAGGTGAGATGTCTCCGTGTCTGTGTGTGTGTGTGTGT
GTGTTTGTGTGCGCGCGCGCGCGCGCGCGCGTGTGTGTGTATGTGTGTGT
GTGCGCGCGCGCGTGTGTGTATGTGTATGTGTGTGTGTATGTGAGTGCGC
GTGTTTGTGTGTCTGCGTGTGTGCGCGCGCGCGCGTGTGTGTATGTGTAT
GTGTGTGTGTTTGTGAGTGCGCGTGTGTGTGTGTCTGTGTCTGTACGCTT
TTGGTAACGCATCTTGATCTATAAGCAGCGACACCTGTGCTGCAGTGCAA
TCTGAACCAGTCATAATTGCCCTGAGGAAGGTGAAAGACGGTCACCGAAA
CGTCGGTTGAATAAATCACTTGGTTGTGTAAAAGAGTCTTTTATTCAGTT
CCAAAAAGTTTGATTTATATTCTTTCAAACTCTCTCCCGGCCCGTCCGCA
GGTGTACCTGAGTCACTACCCGGAGCGTCACTTCGTGGAAGAGAACGCGC
GCGCCGTCATCGACGAGTTCCAGTACAACATCAAGGCCATCAACGACGCC
ATCGCCAAGCGCAACAACCTGGGAGACGTCTCCAACAGTTACCTGCTCCC
CAGCAAGATTCCCAACAGCATTTCGCGGTAG

Coding sequence (CDS) from alignment at Sc0000042:223773..236653+

>Blg00540.0 ID=Blg00540.0|Name=Blg00540.0|organism=Branchiostoma lanceolatum|type=CDS|length=3216bp|location=Sequence derived from alignment at Sc0000042:223773..236653+ (Branchiostoma lanceolatum)
ATGACGACGCAGTGGGACTGTGAGCGGAAGGGACACAGATGGGCCAATGA
CGGCTTCAGACTGTACAGCGAGACTCACGGGGCGGAGGAGTTTAAGCAGA
AAATGGCCGATCTGTTTTCGAACGACCACACCGTCGGGTTCGGGTCTCGG
GTGAAGCTGAGCTGGGACAAGTCGCTGGCGAAGATGTCGGTAATTGGCGC
GAGCGTGACGCAGGGGAAGCGGCTTCACCCGTGCGCAGTGGGGGCGGTGG
GCACGGTCAGCGTGGTGGGCAACCCGCAGTTCCCGCCGCACGACTTCTTC
CGGGCGGGCCGGGTCTTCCCGCTGCGCCTGCGGCACTCCAACTACACTCA
GACCGACGACGCCGCGTCCGACATCCGCTCCGTCGCACTCAAGTTCCTGG
ACGGAGACGAAGGAGGCCCGCTGGACCTTGTGATGAACACGGGCGCCATC
TCGCCGTACTGGGACGTCCAGGGCGCCGCGGACTTCCTCGCCGCCATGCG
GTCCGCCGCGGGACTGAAGAACTTCTGCGCCGAGCATCCAGTCAGACACT
ACGCGCTGATCGACTCCCTGAGACGCGCGCCAAACTCCTTCACTGACCTG
ACGTACTACTCGCAGCACGTCTTCCGCTTCATGGCGAAGGACGGCGAGCG
TCGCTACGTCAAGTACCGCCTCATACCTGACGTTGACGTCCACGAGACGG
GGCTGCTGGACAGGAACGAACAGCCCAAGCCATGGTACACGGAGCGGGAC
ATGACGGAGCGGCGGCCGCGCGGCTTCCTGCGGGCGGAGTTCGCGCAGGA
GCTGCAGCGCTCCCTGCTGGAGTACCGGCTGCAGGTGCAGCTGCACGAGT
GGGTGGAGGGCGACCCTTACGAGATCTTCAACCCCGCCTGCATCTGGGAC
CCCAAGACGCACCCCTGGATGGACCTGGCCAGGGTCTGCGTCACCAACCT
CCTCCCACAGAGCGTCTTGGAGAGGACGATATTCGACCCATCCACCCAGC
CGCCATCTTTGGGTCTCCTCGAACCGAAGTCCAGCCAAGACCATAATAGT
CTCCCGCACCTGACCTCTGACCTGCACGCCCGACCAATGAGACCGGGGGA
GGGGAGGCTGCCGGTTGACCTGGCGGAGGGGTCGTACGCGCTGGAGTTCC
ACACGGGCGTGCAGCGGGGCGCGGGCACCACGGCGGACGTCTGGATCACG
CTCACTGGGACCTGGCTAAGGACGGACAGGATCAAGATGGAAAAGTCATT
CTTCGACGAGTTCGAGAGGGGGGCGGTCAGCCGCTTCCACTTCAAGTCTG
TCGATGTAGAAGAGGTTCTCCTGGTGACGCTTGAGAGCAGCTCGAAGGGG
TTCTGGCACGACTGGTACGTGGAGAACGTGTTCGTGAACGACAGGAAGCG
CGGCCGGCGGTACGAGTTCCCGTGCCACAGGTGGATCCGAGACAGGGTCG
TGCTGAGGAGCGGACACGCCTGCCTGAACTCGTACGAGTTCCACGACCTG
CTTGCGGCGGAGCGGCAGTTGGAGGTCCAGGACCGGCAGCGGCGGTACAA
GTGGTCCTACAGCATCCCGGGCTGCCCCGGCCACCTCTACGGCGTCACCA
ACCAGGACCTACCGCGAGACGTCCGCCTCATGAACGAGAAAGCGCGAGAC
TTCGCCACCGCACCCAAACGCGGAGGCGTCAAGACTTTCTTTAAGCGGGT
CTTCGGAATTCTCCGCAGTTTGGACGATTTTAAGGACCTTGCCAGGTCCG
TAACGAGCGAGATCTCCCCGCATATCATGGAGGACTGGCACAACGACGTA
GAGTTCGGGCGGCAGTTCCTGAACGGGATCACGCCCAGCGCCATCCGTCG
CGTTCGAGGCGGTCTTCCCGCCAACTTCATGGTGCGAGACGAGATGGTGC
AGGGCTGCCTGGACGAGAAGACGACGCTGAGTGAAGAAATCGAGGCGGGC
CACATCTACATCGTGGACTGCGGCATCCTAGATGGACTTCAGCAGAACAC
CACCATGGGGAGCTTCTACCTGGCCGCTCCGCTAGCGCTCTTCCACGTCA
ACAGACTCGGGGACTTCCTCCCCATCGCCATTCAGATCAACCAGAGACCA
GGCAACGACAACCCTGTCTTCACCAGCGAGGACTCGGACATCGACTGGCT
CATGGCCAAGATCTTCCTGCGCAACGCGGACGCGCAGCTGCAGCTCATCG
TCAGCCACCTGCTGGACACGCACCTCGTCATGGAGCCGTTCGCGGTCGCC
ACCTACCGACAGTTGCCGGGAGTGCACCCGCTGTACAAGCTGCTGGTGCC
GCACTTCCGCGGCATGCTGGGTATCAACGTGTTCGTGCGGGAGGCGCTGA
TCAGGGAGGGGTCGGTGCTGGACGGTGTCATGTCGCTCGGGCCGCAGGGC
AGGCACGACCTGCTCAGAAAATGTTACAAGGCCTTCAACATCCGGGCACT
GGACCTGCCCACATCCCTGAAGGACCGAGGGTTGGACGACTTCCGGCTGT
TGCCTGGTTACCGTTACCGGGACGACGGCATGATCATCTGGGGATGTATC
GAGAAGTTCGTCACAGACATGCTGAGCCTTCACTACGATCGCGACGCCGC
CTTGCTGGACGACCTGGAACTGCAGCGGTGGATCAGTGACGTGTACGAGC
ACGGCTTCAACTGGGAGGACAGCCAAGACCGCGGCATCCCGCACAGGATC
AAGTCCTTCCGACAACTGCATCATCCTCCTCCTCCTCCTGTTCCCCNATC
TCGTGACGATCATCATCTGGACGTGCTCGGTGCAGCACGCGGCGGTGAAC
AACGGCTGCCGGGACATCCTCGGCTTCGTGCCGAACGCGCCACTCTGCCT
GCGCCGCCCGCCCCCGCCCTGGAAGGGCATCATCAACATGACGGACATCG
TGCGGACTCTACCGNGTGTGCGTGTGTGTGTATGTTTGTGTGTGTGTGGA
TGAGTGTGCGGACTCTGCCCGACATGGACACGGCCGTGCTGCAGACCAAC
ATCGCCGACATGATGTGCGAGGAGCCCAGAGACGAGGTGTACCTGAGTCA
CTACCCGGAGCGTCACTTCGTGGAAGAGAACGCGCGCGCCGTCATCGACG
AGTTCCAGTACAACATCAAGGCCATCAACGACGCCATCGCCAAGCGCAAC
AACCTGGGAGACGTCTCCAACAGTTACCTGCTCCCCAGCAAGATTCCCAA
CAGCATTTCGCGGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00540.0Blg00540.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00540.0-exon-Sc0000042-1570713199:223773..223812Blg00540.0-exon-Sc0000042-1570713199:223773..223812Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:224175..224254Blg00540.0-exon-Sc0000042-1570713199:224175..224254Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:225100..225225Blg00540.0-exon-Sc0000042-1570713199:225100..225225Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:226042..226210Blg00540.0-exon-Sc0000042-1570713199:226042..226210Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:226931..227060Blg00540.0-exon-Sc0000042-1570713199:226931..227060Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:227464..227652Blg00540.0-exon-Sc0000042-1570713199:227464..227652Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:228094..228319Blg00540.0-exon-Sc0000042-1570713199:228094..228319Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:229016..229369Blg00540.0-exon-Sc0000042-1570713199:229016..229369Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:229666..229819Blg00540.0-exon-Sc0000042-1570713199:229666..229819Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:232618..233093Blg00540.0-exon-Sc0000042-1570713199:232618..233093Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:233605..233745Blg00540.0-exon-Sc0000042-1570713199:233605..233745Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:234240..234574Blg00540.0-exon-Sc0000042-1570713199:234240..234574Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:234848..234993Blg00540.0-exon-Sc0000042-1570713199:234848..234993Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:235189..235340Blg00540.0-exon-Sc0000042-1570713199:235189..235340Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:235720..236037Blg00540.0-exon-Sc0000042-1570713199:235720..236037Branchiostoma lanceolatumexon
Blg00540.0-exon-Sc0000042-1570713199:236474..236653Blg00540.0-exon-Sc0000042-1570713199:236474..236653Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:223773..236653 +
Properties
Property NameValue
GeneIDBlg00540