|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:396603..399278+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00539.0 ID=Blg00539.0|Name=Blg00539.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2676bp|location=Sequence derived from alignment at Sc0000042:396603..399278+ (Branchiostoma lanceolatum)
TTCTCAGTCCTATCGTTAGTCACTGACGAAAGACAGTGGATACTGTCTGA
AACGTCTGACTGTTTCAAAATCTTATCCAGTTGCTTGAGTAATTATTTTT
GGCGTATCTTATTACCTGGATGTCTAACCTTCATCAACGTATCAAAGATC
AATACGGTAAGTTTTGCCTAAGCTCAGTGAGGGATCTGGAGAACACCAGC
AGGAAGATTGCGGACTACCGGAACCATCTACGCTTCAGTTTGCGGTGCCT
CAAGGTAAGTGTCACTCCTGTCAGTTTACGCCTAAAGACCTCCGTCAGAG
GCTTCAACGCCAACAAAATCATTCTCAACGCCGAAAGAAAGCTACTAAAC
GAGAGGGTAAGACAGATCAACTATAAACTGGACGGGCTGAACACGAAAAA
AGCTAACCTGGTACAAGTACTGAGGGAACAACTGTCAGAAGAGACCTTTG
CAGAAACTGAGAAATTCATAACACACGGACAGCTCTCTCAACACGAGAAA
GGAAAAGTCAGACAGAAGAACAAATTTGAACGTTTGGAACAGAAGGAAAT
GTTTAGTTCAGCAGACAAGGACCCCAACTGGAGATCTAGCAGTTCCAAAC
CCAAAATCATAGCACCAAGTAGAACAGACGAGAGGTGGGTTAAGAACCTG
AGCAGTCACACTCTTACAGAACCGGAGGAATCCCTACTTTCCAAAGGGCT
AAATTTCGCAGTAGCGCCTAACAAGATCCCCAATATTGACATTATCACAG
AAACTGAATCAGCAATTCGTCGGGCCCATATACCATATAAACAGGCTGAA
GCCTTACGCACCAAAGTAGCCACCACTCTGAAAGTCTCTAAACCCCCTTC
TAGCAACATCACCCGGGAAGAACAAACTGCGCTCAAGGATTTGGCCACTA
ATCAAGACATAGTGATCCTTCCCGCGGACAAGGGCAGATGCACAGTAGTC
TTAGACAGAGAACAGTATGACGGAAAAGTTCAAGACCTATTAGGGGACAA
AGACACATACAGGCCCTTGAAAAAGAACCCCACAAACAAGTTCAAAAAGG
AAATCCATAAAGCTCTCGAGAAATTGAAAGATGACAAGTTTCTGGACCAG
GCCACCTATTTCAAGCTCAATCCCAATACAGAACAACCCCCAGCATTCTA
CGGCCTTCCCAAAATCCACAAACCCGGTGTCCCTCTACGACCCATAGTAT
CCGGTATAGGATCTGTCACTTATAACCTAGCAGGTCATCTGGCTAAGATC
TTGGGACCGTTGGTGGGAAAGTCTCAACACCATGTACAGAATAGTGCAGA
CTTCGTCCAAAAAATCAAAGACATCACTGTAGCAGAAGATGAAATCATCA
CTTCATATGATGTGTGCTCGCTTTTCACTTGCATACCCCCTAAGGAGGCA
GTATCAGTAGTTAGGGAAGCCTTGGAGGCCGACGACACACTTGCAGATAG
AACCAAACTCTCCGTGGACCACATATGTGAACTGCTAGACCTCTGCCTAG
GGTGCACTTATTTCACTTACAAACAACAGTTTTTCCAGCAAGTGCACGGC
TGTGCTATGGGATCACCGGTATCGCCCATTGTTGTGAACCTGTATATGGA
GAAGTTTGAGAACAAAGCCCTCAGTACTTTCAATGGCCCTCCCCCAGCAA
ACTGGTTTCGCTATGTAGACGACACTTGGTGTAGGCTAAAGAAGAGAGTA
GCTGATGACTTCTTTGACCATATTAACCAGGTAGATGACAACATCAAGTT
CACACAGGAGTCGTGTCAAAACAACATGCTCCCCTTCTTAGACACCAAAA
CCATCATAGAGAAGGATGGCAACCTTCAGTTCGAAGTGTACAGGAAACCG
ACCCACACTGATCAATATCTGGCCTTTGATTCCCATCACCCTTTGGAACA
CAAACTAGCAGTGATTAAAACTCTCTTCCATCGAGCAGACAATGTCATTA
CCTCAGACGAAGCAAAAACAGAAGAACACAGACATCTCCGTGTGGCTTTA
GCCAAGTGTGGCTACCAAAATTGGACCTTCAACAAGGCCCTCAAACCTTC
TGACCAGTCTAAGAAAACACTCAAGTGCAGACCATTGACCAACAGAAACA
AGGCCAACATTACCATTCCCTACGTCCAAGGAGTATCGGAAAAACTCAGA
CGTATCTTCCAAAACTTCAACATTGCCACTAACTTCAAACCTCACTCAAC
TCTCAGGCAGAAACTAGTCCATCCAAAAGACAGGCCTGAAAAAGGCATCA
AAGCCAATGTCATCTACAAACTGAAATGTGAGGAACCGAACTGCAATAAC
ATGTACATTGGGGAGACAAGTCGACCACTAAAAGAAAGGTACAAGGAACA
TTGCAGAAAGAGCGCTAACCGCTACTCCTCTGCCATTTACCACCATCTAA
AACACAACCAGGGACACTCATTCAATTTCGAATCCACGGACATCCTAGAT
CGTGAAGAACGCTGGTTCGAACGGGGAATTAGAGAAGCAATATATGAGAG
GATGTACAACCCCGCCCTCAACAGGAAAGGGGGTCTACGCGTTCAACTTT
CAGGCACCTGGGATAATGCACTGCCCACCACCCCCCACCCCCGGACAAGC
AACATTTAGTTACTGTACTAGAACAACAGTAGCTAATTGAACTATTGGCA
TAAACTTTGTCTTGAATTAATCTTCT Coding sequence (CDS) from alignment at Sc0000042:396603..399278+ >Blg00539.0 ID=Blg00539.0|Name=Blg00539.0|organism=Branchiostoma lanceolatum|type=CDS|length=2490bp|location=Sequence derived from alignment at Sc0000042:396603..399278+ (Branchiostoma lanceolatum)
ATGTCTAACCTTCATCAACGTATCAAAGATCAATACGGTAAGTTTTGCCT
AAGCTCAGTGAGGGATCTGGAGAACACCAGCAGGAAGATTGCGGACTACC
GGAACCATCTACGCTTCAGTTTGCGGTGCCTCAAGGTAAGTGTCACTCCT
GTCAGTTTACGCCTAAAGACCTCCGTCAGAGGCTTCAACGCCAACAAAAT
CATTCTCAACGCCGAAAGAAAGCTACTAAACGAGAGGGTAAGACAGATCA
ACTATAAACTGGACGGGCTGAACACGAAAAAAGCTAACCTGGTACAAGTA
CTGAGGGAACAACTGTCAGAAGAGACCTTTGCAGAAACTGAGAAATTCAT
AACACACGGACAGCTCTCTCAACACGAGAAAGGAAAAGTCAGACAGAAGA
ACAAATTTGAACGTTTGGAACAGAAGGAAATGTTTAGTTCAGCAGACAAG
GACCCCAACTGGAGATCTAGCAGTTCCAAACCCAAAATCATAGCACCAAG
TAGAACAGACGAGAGGTGGGTTAAGAACCTGAGCAGTCACACTCTTACAG
AACCGGAGGAATCCCTACTTTCCAAAGGGCTAAATTTCGCAGTAGCGCCT
AACAAGATCCCCAATATTGACATTATCACAGAAACTGAATCAGCAATTCG
TCGGGCCCATATACCATATAAACAGGCTGAAGCCTTACGCACCAAAGTAG
CCACCACTCTGAAAGTCTCTAAACCCCCTTCTAGCAACATCACCCGGGAA
GAACAAACTGCGCTCAAGGATTTGGCCACTAATCAAGACATAGTGATCCT
TCCCGCGGACAAGGGCAGATGCACAGTAGTCTTAGACAGAGAACAGTATG
ACGGAAAAGTTCAAGACCTATTAGGGGACAAAGACACATACAGGCCCTTG
AAAAAGAACCCCACAAACAAGTTCAAAAAGGAAATCCATAAAGCTCTCGA
GAAATTGAAAGATGACAAGTTTCTGGACCAGGCCACCTATTTCAAGCTCA
ATCCCAATACAGAACAACCCCCAGCATTCTACGGCCTTCCCAAAATCCAC
AAACCCGGTGTCCCTCTACGACCCATAGTATCCGGTATAGGATCTGTCAC
TTATAACCTAGCAGGTCATCTGGCTAAGATCTTGGGACCGTTGGTGGGAA
AGTCTCAACACCATGTACAGAATAGTGCAGACTTCGTCCAAAAAATCAAA
GACATCACTGTAGCAGAAGATGAAATCATCACTTCATATGATGTGTGCTC
GCTTTTCACTTGCATACCCCCTAAGGAGGCAGTATCAGTAGTTAGGGAAG
CCTTGGAGGCCGACGACACACTTGCAGATAGAACCAAACTCTCCGTGGAC
CACATATGTGAACTGCTAGACCTCTGCCTAGGGTGCACTTATTTCACTTA
CAAACAACAGTTTTTCCAGCAAGTGCACGGCTGTGCTATGGGATCACCGG
TATCGCCCATTGTTGTGAACCTGTATATGGAGAAGTTTGAGAACAAAGCC
CTCAGTACTTTCAATGGCCCTCCCCCAGCAAACTGGTTTCGCTATGTAGA
CGACACTTGGTGTAGGCTAAAGAAGAGAGTAGCTGATGACTTCTTTGACC
ATATTAACCAGGTAGATGACAACATCAAGTTCACACAGGAGTCGTGTCAA
AACAACATGCTCCCCTTCTTAGACACCAAAACCATCATAGAGAAGGATGG
CAACCTTCAGTTCGAAGTGTACAGGAAACCGACCCACACTGATCAATATC
TGGCCTTTGATTCCCATCACCCTTTGGAACACAAACTAGCAGTGATTAAA
ACTCTCTTCCATCGAGCAGACAATGTCATTACCTCAGACGAAGCAAAAAC
AGAAGAACACAGACATCTCCGTGTGGCTTTAGCCAAGTGTGGCTACCAAA
ATTGGACCTTCAACAAGGCCCTCAAACCTTCTGACCAGTCTAAGAAAACA
CTCAAGTGCAGACCATTGACCAACAGAAACAAGGCCAACATTACCATTCC
CTACGTCCAAGGAGTATCGGAAAAACTCAGACGTATCTTCCAAAACTTCA
ACATTGCCACTAACTTCAAACCTCACTCAACTCTCAGGCAGAAACTAGTC
CATCCAAAAGACAGGCCTGAAAAAGGCATCAAAGCCAATGTCATCTACAA
ACTGAAATGTGAGGAACCGAACTGCAATAACATGTACATTGGGGAGACAA
GTCGACCACTAAAAGAAAGGTACAAGGAACATTGCAGAAAGAGCGCTAAC
CGCTACTCCTCTGCCATTTACCACCATCTAAAACACAACCAGGGACACTC
ATTCAATTTCGAATCCACGGACATCCTAGATCGTGAAGAACGCTGGTTCG
AACGGGGAATTAGAGAAGCAATATATGAGAGGATGTACAACCCCGCCCTC
AACAGGAAAGGGGGTCTACGCGTTCAACTTTCAGGCACCTGGGATAATGC
ACTGCCCACCACCCCCCACCCCCGGACAAGCAACATTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00539.0-exon-Sc0000042-1570713199:396603..399278 | Blg00539.0-exon-Sc0000042-1570713199:396603..399278 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:396603..399278 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00539 |
|
