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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:396602..405315- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00538.2 ID=Blg00538.2|Name=Blg00538.2|organism=Branchiostoma lanceolatum|type=mRNA|length=8714bp|location=Sequence derived from alignment at Sc0000042:396602..405315- (Branchiostoma lanceolatum)
TCAATATGACCCACATATGACAGTCAATTTGGTATGCCATGCACGCTGCC
TTTCCAATTTTGACCCAATCTTAGTCGGTGAGCTTCTCTGCCTGACTGGA
GCTTCTCTGGCTGGCTGATACGATCTTGCCACCGTAGAGATCTGCTTGGA
GATTTGTCCGGAAGCACTGGTCGGTCAGTCAGTACCTCATTTTAAAAATG
GCGTCCAACACAATCACCAACGTTCACGACGGAACCGACTCGGCGATCAG
GCAGGTGCGGTCGAACGCGGTGATCGGGCACGGCGGCGCGAGTCTAGAAC
TCCTCAAAAAGGTTGGGGGGCGGGGTGTTGAAGATTTGGAGTTTAACATT
GCGAGCTCGATCGCTGTCACCGCAGAGGGAGAAATCGTAGTGGCTGATCG
TTTCAACTTACGCCTGCAGTATCTGGACAAAGATGGCGCCTTCATGAAGA
TGGTCGATCTGCGTGATCTGGAGTTGATGAAGCTGTGGAAGCCGGAAGAT
GTGGCGGCACTGACAAACGGCGAGCTGTTGGTGACAGGAGACGGACACAG
GATTCACGTACTGGACAATGAGGGCATAGAGTCACGTGTCATCCAGGTGA
CAGGGGCTGCAGAGACAAGTACAACTACACAGGGGATCGCTGTTGACGGT
TTGGGGCGCATCATCGTCACTATTGGGTACCAGGTTTTCGTACTCAGCCC
CAGTGGTGACGTCATGCTGAAGTTCGGGGACGAAGGTCAAGATCAGCAGC
AGCTGGGTCCCGACCTCCTTGTGGCCGTCAACAGCACCAACCAGATCATC
GTCAGTGACCATGACAACCACAACTTGAAGGTATTTAACCCCGACGGTGG
TCATCTCTTCACGTGCGGGTCACAAGGCCCCGAACCTGGTCAGCTGGAGA
ACCCCCGGTCTGTCATCACGGACAGCGAGGACAACATCATCGTGGCTGAC
TTCTACAACCATCGCGTTTCTCTGTTCAGCCCGGACGGCAAGTTTATCCG
GCACGTGGTGGAGGAAGATATCACGTTCAGTGACTTCAACCCAACGGCAC
TGGCACTCACTCCAGACGGGCACTTGGTCGTTTCTGAATTTCGTTGTATG
ATTAGTTTCTTTAAGTTAGAAGGATAAAGATGTCAAGAAAACGTATCTTT
ATACTAGTAATAAATGTGAAAAGGTTGATACCCGTGCACGACATTGCATA
CCTCGGTATCTTCACTTATGTTTGCAGTTCTAAGTCTGTAATTTGACTAA
GTATACGCGTTGGTAAGGTTGAGAAATGTTTTTAGAATGTTGGTCATTAA
AGGATTGCTTTTTTTTAATGCACTCTTGGCGTGTTATTTCGTTCATTGGT
GCTTCATGTATTTGTTGTTCGACGCGACAGAAGAAATCAGAATTCCTACT
GTCCCAGCGGTTCTTTCAAACTTCAAATCACCGGGGCAGACTGATTATCC
AGGTGGCTGGGGTGCTCATAGAGGCCCGAGGAATGTCCTCCCGAAGCCCT
GGGAAACTGGTTATGCCGGTGTCACAATGTTTGGGCGATTTGTTGATCGG
TGAAAGCCACCGAATTTCAATATCGAGCGTATGTCATTTTCGCCTAAAAA
TCGTGTCTGTCTATTTGGACGGGGCTCAACCTACGAACATCGAGGCCGCC
TTCAGCATTTCATAACAAACAGGCCTGCACCCCTCCGAGCACCGCACATG
GAACGTTCCGCTGTGACGTCAATATGACCCACATATGACAGTCAATTTGG
TATGCCATGCACGCCGCCTTTCCAATTTTGACCCAATTTTAGTCGGTGAG
CTTCTCTGATCTTCTCTGCCTGACTGGAGCTTCTCTGGCTGGCTGATATG
ATTTTGCCACCCTTGAAGGTTGCTACCATTGTACGTCATTCTAAATATCT
CTCTATCATCAACTGTTTTAAGAATGTTCGATGAAACTTTGTACTATGGG
AGACGTTGGTAAGGTTGGAAAATGTTTGTTAACGTGTTGGTCAATAAAGG
ATTGTTTGAAGCACTCTGGGAGTGTTCTTTCTCGTCAAACTACTGTTTCA
AGTCCATTTCATTTCATAACAAACAGGCCTGCACCCCTCCGAGCACCACA
CATGGAACGTTCCGCTGTGACGTCAATATGACCCACATATGACAGTCAAT
TTGGTATGCCATGCACGCTGCCTTTCCAATTTTAGTCGGTGAGCTTCTCT
GCCTGACTTCTCTGGCTGGCTGATACGATTTTGCCACCGTAGAGATCTGC
TTGGAGATTTGATAGTCAGGAAGCACTGGTCGGTCAGTTTAACACAGTCA
GCGATATCACCAACGTTCACGAGGGAACCGACTCAGCGATGTCGTCTCAA
ATCACGCAGGTGCGGCCGGACGCGGTGATCGGGCACGGCGGCGCGAGTCT
AGAACTCGTCAAAACGTTTGGGGAGGGGGGCAGTGAAGATGACCAGTTTA
ACGCCCCGACCTCGCTCGCTGTCACCGCAGATGGAGACATCGTCGTGGCA
GATGGCGGCAACTTACGCCTGCAGTATCTGGACAAAGATGGCTCCTTCAA
GAAGAAGGTCGATCTGGAGTTCAAGCCGGAAGATGTGGCGGCACTGACAA
ACGGTCAGCTGTTGGTGACAGGAGACGGACACGGGAGGATTCACGTACTG
GACAATGAGGGCGTGGAGTCACGTGTCATCCAGGTGGCAGGGGCTGCAGA
GACATGGGCATCTACACAGGGGATCGCTGTTGACGGTTTGGGGCGCATCA
TCGTCACTATTGGGTACCAGGTTTTCGTACTCAGCCCCAGTGGTGACGTC
ATGCTGAAGTTCGGGGACGAAGGTCAAGATCAGCAGCAGCTCGGTCCCGA
CCTCCTTGTGGCCGCCAACAGCACCAACCAGATCATCGTCAGCGACTTAA
ACAACCACAACCTGAAGATATTCGACACCGACGGTCGTCATCTCTTCACG
TGCGGGTCACAAGGCCCCGGACCTGGTCAGCTGGAGAACCCCCGGTCTGT
CATCACGGACAGCGAGGACAACATCATCGTGGCTGACTTCTACAACCATC
GCGTTTCTCTGTTCAGTCCGGACGGCACGTTTATCAGGCACGTGGTGATA
AAGGAGGAAGAGATCATGTTCAGTATGTTCAATCCTACGGGACTGGCAAT
GACTCCAGATGGGCACTTGGTCGTTTCTGAATTCCTTTGCATGATTAGTT
TCTTTTTGTTAAGTTAGATGGATAAAGACGGTTCCTTCTTAGGAAGGTCG
ATCGTGTGTGGCGGCCCTGACAAACGGCGAGCTGTTGGTGACAGGAGACG
GACTCCCCATGCATGCCCTACTTGTTCACTGTCCCTTAAACTGTGTTAAT
GTGACTTTATTTTCCGCCATTGCCTGCTGACAACGCCCCATTTCTGTCAA
TCAAAAAGGTTATTCCCTGTCAATAGTGCAAAAAAAGGCTTATTGAAAAA
ATACTTATTCTCGCACCATAATTAAGCGTGATCATGCTTAGCGTTAGGGT
TATATAAAGGTTACGGTTGGATTATGTTTTATTCACAGGAACTGTGTCTG
CATCTATATAACCACCGTAACACACCAGCTGCCTGTCAATATAGTAAATT
CAAGCTAAGCATGTCGTGTGAATAGCGGGGGGAAATCCTCATTGGATCGA
TAGCGGGGAATAATTAATATTGACAGGCTAGCCCCTCCAGCGTCAAATTA
GAAATTGGTCATTTATCTACATTAAACTAGATCATGCAGACAGTAGAGTG
GGTTTCTATATGCAGTAGGAAAAAAGGCAAAATGCTGTAAAAGATTCTAT
ATGCTGTAGGATAACAGATAACGGCATGCTCTCCCATATATCTATCTTAC
ACTCTACATTCGATGTTTACAAGACCAAAATATGAGTTTTCTGTCATACC
AATTTTTGTCCACATTACCGTATTCAACAAAGACAAATAAACGTAGGTTT
ATATCAATAGAGGCGAAAAGGTCGCTACCGTTGTACGCCATTCTAAATAT
CTCTCTATCATCAACTGTTTTAAGAATGTTAGATGAAACTTTGTACTATG
GGAGACGTTGGTAAGGTTGGAAAATGTTTGTTAACATGTTGGTCAATAAA
GGATTGTTTGAAGCACTCTGGGAGTGTTCTTTCTCGTCAAACTACTGTTC
AAGTCCATTTCATTTCATAACAAACAGGCCTGCACCCCTCCGAGCACCAC
ACATGGAACGTTCCGATGTGACGTCAATATCTGACCCACATATGACAGTC
AATTTGGTATGCCATGCACGCTGCCTTTCCAATTTTGACCCAATTTTAGT
CGGTGAGCTTCTCTGCCTGACTTCTATGGTTGGCTGATACGATTTTGCCA
CCGTGGAGATCTGCTTGGAGATTAGTCAGGAAGCACTGGTCGGTCAGTCA
GTATCTCATTTTAAAAATGGCGTTCAACACAATCAGCGATATCCCCAACG
TTCACGACGGAACCGACTCGGCGACGTCGTCTCAAATTACGCAGGTGCGG
CCGAACGCGGTGATCGGGCACGGCGGTGCGAGTTTAGAACTCGTCAAAAC
GTTTGGGGAGGGGGGCAGTGAAGATGACCAGTTTAACGCTCCGACCTCGC
TCGCTGTCACCGCAGAGGGAGACATTGTAGTGGCAGATGGCGGCAACTTA
CGCCTGCAGTATCTGGACAAAGACGGCTCCTTCAAGAAAAAGGTCGATTT
GGAGTTTAAGCCGGAAGATGTGGCGGCACTGACAAACGGTGATCTGTTGG
TGACAGGAGACGGACACGGGAGGATTCACGTACTGGACAAAGAGGGCGTG
GGGATACGTGTCATCCAGGTGACAGGGGCTGCAGAGACATGGGCATCTAC
ACAGGGGGTAGCTGTTGACGGTTTGGGGCGCATCATCGTCACTATTGGCA
ACCAGGTTTTCGTACTCAGTCTCAGCGGTGACGTCATACTGAAGTTCGGG
GACGAAGGTCAAGATCAGCAGCAGTTGGGTCCCGACCTCCTTGTGGCCGC
CAACAGCACCAACCAGATCATCGTCAGCGACTTAAACAACCACAACCTGA
AGATATTTGACACCGACGGTCGTCATCTCTTCACGTGCGGGTCACAAGGC
CCCGGACCTGGTCAGCTGGAGAACCCCCGGTCTGTCATCACGGACAGCGA
GGACAACATCATCGTGGCTGACTTCTACAACCATCGCGTTTCTCTGTTCA
GTCCGGACGGCACGTTTATCAGGCACGTGGTGATAAAGGAGGAAGAGATC
ATGTTCAGTATGTTCAATCCAACGGGACTGGCAATGACTCCAGACGGGCA
TTTGGTCGTTTCTGAATTTCGTTGCATGATTAGTTTCTTTAAGTTAGAAG
GATAAAGATGTTTCCTTCAAGGAGGTCGATCTGGGGTTTAGGCCGGGGGA
CGTGGCGGCCCTGACAAACGGCGAGCTGTTGGTGACAGGAGACGGACTCC
CCATGCATGCCCTACTTATTCACTGACCCTTAAACTGTGTTAATGTGACT
CCCTTTCCCCCATTGCCTGCTGACAACGCCCCATTTCTGTCCATCAAAAA
GGTTATTTCTTGCCATTAGTGCAAAAAAGTCTTTGAAAATAATGTTATTC
TTGCACTATTTTACGTGATCATGCTTAGCGTTATATAAAGGTTACGGTTA
GGATTATGTTTAAATTCTATTCACAGGATCTAGGAACTGTTTCTTTATCT
GTATAGCCGGTACAACCGCCATTCGGCGTAACACATCCGCTGCCTGTCAA
TGGTGAAAAACATTCAGGCTCAGCCTGTCAATAGCGGGGGGGAAATCATT
ATTGAATCGATAGCGGGGAAGAATTATCATTGACAGGCTGTCAAGTTAGA
AACGCCAAAAATAATTACTCAAGCAACTGGATAAGATTTTGAAACAGTCA
GACGTTTCAGACAGTATCCACTGTCTTTCGTCAGTGACTAACGATAGGAC
TGAGAACACCAGCTTTATACCAAAACTCTGAATAGATATGTTAATGAGGT
AAAGACAATTTAGGATGTCTTGAAGTAGTCTTCAAAAAGAAGATTAATTC
AAGACAAAGTTTATGCCAATAGTTCAATTAGCTACTGTTGTTCTAGTACA
GTAACTAAATGTTGCTTGTCCGGGGGTGGGGGGTGGTGGGCAGTGCATTA
TCCCAGGTGCCTGAAAGTTGAACGCGTAGACCCCCTTTCCTGTTGAGGGC
GGGGTTGTACATCCTCTCATATATTGCTTCTCTAATTCCCCGTTCGAACC
AGCGTTCTTCACGATCTAGGATGTCCGTGGATTCGAAATTGAATGAGTGT
CCCTGGTTGTGTTTTAGATGGTGGTAAATGGCAGAGGAGTAGCGGTTAGC
GCTCTTTCTGCAATGTTCCTTGTACCTTTCTTTTAGTGGTCGACTTGTCT
CCCCAATGTACATGTTATTGCAGTTCGGTTCCTCACATTTCAGTTTGTAG
ATGACATTGGCTTTGATGCCTTTTTCAGGCCTGTCTTTTGGATGGACTAG
TTTCTGCCTGAGAGTTGAGTGAGGTTTGAAGTTAGTGGCAATGTTGAAGT
TTTGGAAGATACGTCTGAGTTTTTCCGATACTCCTTGGACGTAGGGAATG
GTAATGTTGGCCTTGTTTCTGTTGGTCAATGGTCTGCACTTGAGTGTTTT
CTTAGACTGGTCAGAAGGTTTGAGGGCCTTGTTGAAGGTCCAATTTTGGT
AGCCACACTTGGCTAAAGCCACACGGAGATGTCTGTGTTCTTCTGTTTTT
GCTTCGTCTGAGGTAATGACATTGTCTGCTCGATGGAAGAGAGTTTTAAT
CACTGCTAGTTTGTGTTCCAAAGGGTGATGGGAATCAAAGGCCAGATATT
GATCAGTGTGGGTCGGTTTCCTGTACACTTCGAACTGAAGGTTGCCATCC
TTCTCTATGATGGTTTTGGTGTCTAAGAAGGGGAGCATGTTGTTTTGACA
CGACTCCTGTGTGAACTTGATGTTGTCATCTACCTGGTTAATATGGTCAA
AGAAGTCATCAGCTACTCTCTTCTTTAGCCTACACCAAGTGTCGTCTACA
TAGCGAAACCAGTTTGCTGGGGGAGGGCCATTGAAAGTACTGAGGGCTTT
GTTCTCAAACTTCTCCATATACAGGTTCACAACAATGGGCGATACCGGTG
ATCCCATAGCACAGCCGTGCACTTGCTGGAAAAACTGTTGTTTGTAAGTG
AAATAAGTGCACCCTAGGCAGAGGTCTAGCAGTTCACATATGTGGTCCAC
GGAGAGTTTGGTTCTATCTGCAAGTGTGTCGTCGGCCTCCAAGGCTTCCC
TAACTACTGATACTGCCTCCTTAGGGGGTATGCAAGTGAAAAGCGAGCAC
ACATCATATGAAGTGATGATTTCATCTTCTGCTACAGTGATGTCTTTGAT
TTTTTGGACGAAGTCTGCACTATTCTGTACATGGTGTTGAGACTTTCCCA
CCAACGGTCCCAAGATCTTAGCCAGATGACCTGCTAGGTTATAAGTGACA
GATCCTATACCGGATACTATGGGTCGTAGAGGGACACCGGGTTTGTGGAT
TTTGGGAAGGCCGTAGAATGCTGGGGGTTGTTCTGTATTGGGATTGAGCT
TGAAATAGGTGGCCTGGTCCAGAAACTTGTCATCTTTCAATTTCTCGAGA
GCTTTATGGATTTCCTTTTTGAACTTGTTTGTGGGGTTCTTTTTCAAGGG
CCTGTATGTGTCTTTGTCCCCTAATAGGTCTTGAACTTTTCCGTCATACT
GTTCTCTGTCTAAGACTACTGTGCATCTGCCCTTGTCCGCGGGAAGGATC
ACTATGTCTTGATTAGTGGCCAAATCCTTGAGCGCAGTTTGTTCTTCCCG
GGTGATGTTGCTAGAAGGGGGTTTAGAGACTTTCAGAGTGGTGGCTACTT
TGGTGCGTAAGGCTTCAGCCTGTTTATATGGTATATGGGCCCGACGAATT
GCTGATTCAGTTTCTGTGATAATGTCAATATTGGGGATCTTGTTAGGCGC
TACTGCGAAATTTAGCCCTTTGGAAAGTAGGGATTCCTCCGGTTCTGTAA
GAGTGTGACTGCTCAGGTTCTTAACCCACCTCTCGTCTGTTCTACTTGGT
GCTATGATTTTGGGTTTGGAACTGCTAGATCTCCAGTTGGGGTCCTTGTC
TGCTGAACTAAACATTTCCTTCTGTTCCAAACGTTCAAATTTGTTCTTCT
GTCTGACTTTTCCTTTCTCGTGTTGAGAGAGCTGTCCGTGTGTTATGAAT
TTCTCAGTTTCTGCAAAGGTCTCTTCTGACAGTTGTTCCCTCAGTACTTG
TACCAGGTTAGCTTTTTTCGTGTTCAGCCCGTCCAGTTTATAGTTGATCT
GTCTTACCCTCTCGTTTAGTAGCTTTCTTTCGGCGTTGAGAATGATTTTG
TTGGCGTTGAAGCCTCTGACGGAGGTCTTTAGGCGTAAACTGACAGGAGT
GACACTTACCTTGAGGCACCGCAAACTGAAGCGTAGATGGTTCCGGTAGT
CCGCAATCTTCCTGCTGGTGTTCTCCAGATCCCTCACTGAGCTTAGGCAA
AACTTACCGTATTGATCTTTGATACGTTGATGAAGGTTAGACATCCAGGT
AATAAGATACGCCAAAAATAATTACTCAAGCAACTGGATAAGATTTTGAA
ACAGTCAGACGTTTCAGACAGTATCCACTGTCTTTCGTCAGTGACTAACG
ATAGGACTGAGAAC Coding sequence (CDS) from alignment at Sc0000042:396602..405315- >Blg00538.2 ID=Blg00538.2|Name=Blg00538.2|organism=Branchiostoma lanceolatum|type=CDS|length=936bp|location=Sequence derived from alignment at Sc0000042:396602..405315- (Branchiostoma lanceolatum)
ATGGCGTCCAACACAATCACCAACGTTCACGACGGAACCGACTCGGCGAT
CAGGCAGGTGCGGTCGAACGCGGTGATCGGGCACGGCGGCGCGAGTCTAG
AACTCCTCAAAAAGGTTGGGGGGCGGGGTGTTGAAGATTTGGAGTTTAAC
ATTGCGAGCTCGATCGCTGTCACCGCAGAGGGAGAAATCGTAGTGGCTGA
TCGTTTCAACTTACGCCTGCAGTATCTGGACAAAGATGGCGCCTTCATGA
AGATGGTCGATCTGCGTGATCTGGAGTTGATGAAGCTGTGGAAGCCGGAA
GATGTGGCGGCACTGACAAACGGCGAGCTGTTGGTGACAGGAGACGGACA
CAGGATTCACGTACTGGACAATGAGGGCATAGAGTCACGTGTCATCCAGG
TGACAGGGGCTGCAGAGACAAGTACAACTACACAGGGGATCGCTGTTGAC
GGTTTGGGGCGCATCATCGTCACTATTGGGTACCAGGTTTTCGTACTCAG
CCCCAGTGGTGACGTCATGCTGAAGTTCGGGGACGAAGGTCAAGATCAGC
AGCAGCTGGGTCCCGACCTCCTTGTGGCCGTCAACAGCACCAACCAGATC
ATCGTCAGTGACCATGACAACCACAACTTGAAGGTATTTAACCCCGACGG
TGGTCATCTCTTCACGTGCGGGTCACAAGGCCCCGAACCTGGTCAGCTGG
AGAACCCCCGGTCTGTCATCACGGACAGCGAGGACAACATCATCGTGGCT
GACTTCTACAACCATCGCGTTTCTCTGTTCAGCCCGGACGGCAAGTTTAT
CCGGCACGTGGTGATAAAGGAGGAAGAGATCATGTTCAGTATGTTCAATC
CAACGGGACTGGCAATGACTCCAGACGGGCATTTGGTCGTTTCTGAATTT
CGTTGCATGATTAGTTTCTTTAAGTTAGAAGGATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00538.2-exon-Sc0000042-1570713199:404316..405315 | Blg00538.2-exon-Sc0000042-1570713199:404316..405315 | Branchiostoma lanceolatum | exon |
| Blg00538.2-exon-Sc0000042-1570713199:396602..400093 | Blg00538.2-exon-Sc0000042-1570713199:396602..400093 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:396602..405315 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00538 |
|
