Blg00518.0 (mRNA) - B. lanceolatum

Overview
NameBlg00518.0
Unique NameBlg00518.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:902154..904418+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00518.0 ID=Blg00518.0|Name=Blg00518.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2265bp|location=Sequence derived from alignment at Sc0000042:902154..904418+ (Branchiostoma lanceolatum)
ATGATAGAGCAGATAACACATGAGGAACCACTAGGCGCAAGCGATCATGT CAGAATTGAGTTCAACTTTGTATTCAGCACTCCAGTTAAGGACAACAAGA AGACAATATGGAGATTTGATAGAGGCAACTATGAAATGATGGGTGAGGAC TTGAATCTCAACTGGGATAACCTGCTAGAGTGTAAGCCGACCCAGGAAGC TTACGCATTATTCCAGCAGAGAATTACGAAAGCAGTTCAGAAACACGTCC CTACTAAGACAATTGACCTCTCCAAGAAGAAACTCAAACCACTCTGGATG GACGAGGAAGCTTTTCGAAAACTAAAGAAAAAGCACCACGCCTGGATTAG ATATTTGAATACTAAAGACCAAAAGGACTGGTTAGCATTCAAAACGGCTA GAAATGCGGCCACACATGCGTCCAGAAAGGCAAGAAAATCATTTGAGAGG AAACTTGCCACAGAAGCCAAGCACAACAATAAAGCCTTCTGGAACTACGT TAACAGTCGCCGAAAGACAAGAACACAGGTGGGAGATCTGAAGGACACAC AGGGGAACTTTACTGCCATCGATAGCGAGAAAGCAGAGATACTGAACAAT CAATACTTCAGGACATTCACACATGAGGACTACGAGAATATCCCGACATT CCCTAGGATCCAGTCAACCACAGCTCTCAACACAATTAACATCACAGAAG AGATGGTGCTTGAGCAGCTACAGTCACTTAGAGTTGACAAATCCCCAGGC ATCGATGGCGTACACCCCAGAGTGCTCAAGGAAACTGCAGACGTGATTGT TGGCCCCTTAACCAGGATCTTCCAAACAAGCATCAACGAGGGCAAACTCC CAGACATGTGGAGAGAGGCTTGTATAACTCCCATCTACAAGAAGGGGGAC AAGTCTGACCCCGCAAATTACAGGCCTGTGTCTTTAACCTCTGTACCATG CAAGATGCTGGAGAGGATTATAGTAAACGAATTGATCACTCACATACGGA ACAATGATCTCACATGCGAGCAGCAGCACGGGTTCACACATGGGAAATCC ACTATAACCAACCTACTGGAAGCAATGGACGTTTGGACAGAGGCCCTAAG TCATAGCCTGCCAGTAGACGTAATCTTTTTAGATTATGCTAAAGCCTTTG ATACAGTGCCACACGAGAGACTTCTGAGACGGGTTGAATCCTTCGGAATT GGCGGAAACCTTCTGCAATGGATTCGTAACTTTCTGACACAACGAAGGCA GCAGGTTGTGGTGAACGGAAGTGCCTCCTCATGGAAACCGGTTACAAGTG GAGTGCCCCAGGGTTCGGTCCTCGGACCGCTTCTCTTTACGATTTTCGTA TCAGACATTCCGGAAACGATCCAGAACTTTGTCTCCCTGTTTGCAGATGA TACGAAAATATATGCTGCAGCCCAAAACTGTGAACTGAACGCACACACAA CCTGCTTGCAGGCGGACTTGAACAGCTTATATGAGTGGTCGACAAAGATG CAAATGCAATTCCATCCCGACAAATGCAAGGTCATGCACCTCGGGAAGGC TAACCCCAGACACAAGTATACAATGAATAAAGTAGACGGAACAACGCACA CGCTGGAGAGTATAGAAGAGGAAAAAGACCTAGGGGTCACCATTGACAAG AACCTGACTTTCAGCAAACACACGCAAGTGCAGGTGAATAAAGCAAATAA AACACTAGGGCTGATCAAGCACACCTTCTCACATGTGGACAGTGTATCCT TCTCACTGCTGTATAAAAGCCTGGTTCGACCGCACTTAGAATATGCTACG GCAATATGGCACCCCAAAACCAAGAGAGACCGGGACATGGTGGAAAGAGT GCAACGGCGAGCAACAAAACTGGTGAAGAGTTTAGCCAACCTACCATATT CTGAAAGGCTGAGAGAACTGGACCTTCCCACGCTACACTACAGAAGACAG AGAGCCGACATAATACAGCTGTTCAAGATCACACATGGGTTTGACAAAGT CAGAGTGAACAACCACTGCAACTTATGTGGGAGAGCCATGTTTAAGCCAA GCTTGGCAACCAACACACGGGGACACCAGTTCAAGTATCAAATTCAGAAA GCTACAGGCCCGAGGGCACACTTCTTTCCCACACGAGTTACCCCCGCTTG GAACAAACTCTCACAGACCACGGTCAACAGCAAGACAGTGAAAGAGTTCA AGACAAGACTGGGGCAGGAATGGGGACGGCATCCAGACCTATATGAGTAC CAATTCACATACTGA

Coding sequence (CDS) from alignment at Sc0000042:902154..904418+

>Blg00518.0 ID=Blg00518.0|Name=Blg00518.0|organism=Branchiostoma lanceolatum|type=CDS|length=2265bp|location=Sequence derived from alignment at Sc0000042:902154..904418+ (Branchiostoma lanceolatum)
ATGATAGAGCAGATAACACATGAGGAACCACTAGGCGCAAGCGATCATGT
CAGAATTGAGTTCAACTTTGTATTCAGCACTCCAGTTAAGGACAACAAGA
AGACAATATGGAGATTTGATAGAGGCAACTATGAAATGATGGGTGAGGAC
TTGAATCTCAACTGGGATAACCTGCTAGAGTGTAAGCCGACCCAGGAAGC
TTACGCATTATTCCAGCAGAGAATTACGAAAGCAGTTCAGAAACACGTCC
CTACTAAGACAATTGACCTCTCCAAGAAGAAACTCAAACCACTCTGGATG
GACGAGGAAGCTTTTCGAAAACTAAAGAAAAAGCACCACGCCTGGATTAG
ATATTTGAATACTAAAGACCAAAAGGACTGGTTAGCATTCAAAACGGCTA
GAAATGCGGCCACACATGCGTCCAGAAAGGCAAGAAAATCATTTGAGAGG
AAACTTGCCACAGAAGCCAAGCACAACAATAAAGCCTTCTGGAACTACGT
TAACAGTCGCCGAAAGACAAGAACACAGGTGGGAGATCTGAAGGACACAC
AGGGGAACTTTACTGCCATCGATAGCGAGAAAGCAGAGATACTGAACAAT
CAATACTTCAGGACATTCACACATGAGGACTACGAGAATATCCCGACATT
CCCTAGGATCCAGTCAACCACAGCTCTCAACACAATTAACATCACAGAAG
AGATGGTGCTTGAGCAGCTACAGTCACTTAGAGTTGACAAATCCCCAGGC
ATCGATGGCGTACACCCCAGAGTGCTCAAGGAAACTGCAGACGTGATTGT
TGGCCCCTTAACCAGGATCTTCCAAACAAGCATCAACGAGGGCAAACTCC
CAGACATGTGGAGAGAGGCTTGTATAACTCCCATCTACAAGAAGGGGGAC
AAGTCTGACCCCGCAAATTACAGGCCTGTGTCTTTAACCTCTGTACCATG
CAAGATGCTGGAGAGGATTATAGTAAACGAATTGATCACTCACATACGGA
ACAATGATCTCACATGCGAGCAGCAGCACGGGTTCACACATGGGAAATCC
ACTATAACCAACCTACTGGAAGCAATGGACGTTTGGACAGAGGCCCTAAG
TCATAGCCTGCCAGTAGACGTAATCTTTTTAGATTATGCTAAAGCCTTTG
ATACAGTGCCACACGAGAGACTTCTGAGACGGGTTGAATCCTTCGGAATT
GGCGGAAACCTTCTGCAATGGATTCGTAACTTTCTGACACAACGAAGGCA
GCAGGTTGTGGTGAACGGAAGTGCCTCCTCATGGAAACCGGTTACAAGTG
GAGTGCCCCAGGGTTCGGTCCTCGGACCGCTTCTCTTTACGATTTTCGTA
TCAGACATTCCGGAAACGATCCAGAACTTTGTCTCCCTGTTTGCAGATGA
TACGAAAATATATGCTGCAGCCCAAAACTGTGAACTGAACGCACACACAA
CCTGCTTGCAGGCGGACTTGAACAGCTTATATGAGTGGTCGACAAAGATG
CAAATGCAATTCCATCCCGACAAATGCAAGGTCATGCACCTCGGGAAGGC
TAACCCCAGACACAAGTATACAATGAATAAAGTAGACGGAACAACGCACA
CGCTGGAGAGTATAGAAGAGGAAAAAGACCTAGGGGTCACCATTGACAAG
AACCTGACTTTCAGCAAACACACGCAAGTGCAGGTGAATAAAGCAAATAA
AACACTAGGGCTGATCAAGCACACCTTCTCACATGTGGACAGTGTATCCT
TCTCACTGCTGTATAAAAGCCTGGTTCGACCGCACTTAGAATATGCTACG
GCAATATGGCACCCCAAAACCAAGAGAGACCGGGACATGGTGGAAAGAGT
GCAACGGCGAGCAACAAAACTGGTGAAGAGTTTAGCCAACCTACCATATT
CTGAAAGGCTGAGAGAACTGGACCTTCCCACGCTACACTACAGAAGACAG
AGAGCCGACATAATACAGCTGTTCAAGATCACACATGGGTTTGACAAAGT
CAGAGTGAACAACCACTGCAACTTATGTGGGAGAGCCATGTTTAAGCCAA
GCTTGGCAACCAACACACGGGGACACCAGTTCAAGTATCAAATTCAGAAA
GCTACAGGCCCGAGGGCACACTTCTTTCCCACACGAGTTACCCCCGCTTG
GAACAAACTCTCACAGACCACGGTCAACAGCAAGACAGTGAAAGAGTTCA
AGACAAGACTGGGGCAGGAATGGGGACGGCATCCAGACCTATATGAGTAC
CAATTCACATACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00518.0-exon-Sc0000042-1570713199:902154..904418Blg00518.0-exon-Sc0000042-1570713199:902154..904418Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00518.0Blg00518.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:902154..904418 +
Properties
Property NameValue
GeneIDBlg00518