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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:338337..343771+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00516.9 ID=Blg00516.9|Name=Blg00516.9|organism=Branchiostoma lanceolatum|type=mRNA|length=5435bp|location=Sequence derived from alignment at Sc0000042:338337..343771+ (Branchiostoma lanceolatum)
TTAAAATCATAAAATGCCAGCCTTTTCTTATCGCATATCTAGCTTCATAG
CTTCATACTATGTCGCATGCTGAGTATGTGTTTGCCTCTGCTACTGACTG
CCAGGGCAAAATGAGAATTTTTTTTCAAAGAAGGTGCAAATGATTGGAAA
GTATAAAATGATTTTTATCTTTCATCACATAGCTTCAGAAGTTAAGAACT
TAAGATAGTGGGAGATATATTTAAGAACTAATGGTGAATAAAATGTGCAA
AGTGTTATGATAATTTGAAATGATAAACTTAAAGTTAAACTTTAATTTTT
CATCACAGAACTGCAGAAGATGGCAGAAGGTGAGGGTGAGGCCGGGGTGA
GCGCCATGCCCCTCCCTCCCATGCAGTTCGTCAGCCAGTACACGACGGAG
AACGTTTCCCGCGGCCTGGCGCCCCCGCCGCCTCCACCAATCACAGACCA
GTACTCCATGTTCGGCAGCGACTACCAGGTGGACGACCAGATCATCCGAC
CGCTGGAGTCACAGGTCGGAAGGGAAAGACACGCTGTTTCCATAAAAATA
CTCTTTACTAGTACAAGGGCTGCCGAAACAGAGATGGGCACTGCCTTATG
CACCTTCGGTGCGGGGAGGACTTTAATCCTGAAAGTGAAAGGATGCATCC
GTGAATAAGTTTGTATATCACTAGTACTTGCCAATGCTTTTATGACTGTT
TGTCACCTTCCTCAGGGCAGTACTGACTGGTTCTACTTGCAAACCCAAAA
GTCACTGAGTTTGTATCCCCCTCATCATCATCAATGTACATGTAGAATTT
ACTCTAACACTGCCTTCCTCTGCAGGGAATCCGTCGTCTCCACCCCGACA
AGTTTGACCACAAGCTGGAGCTGAAGAAGCTGAACCACTCCATCCTGGTC
AACTTCCTGGACCTGCTGGACATCCTCATCAAGTCACCAAACACCCCGCG
CAGGTCACTCTTTGTTTTATGTATCTGTATCTGTAACTGTATCCATATTG
TAGGGCTTAGACTGAGGCTGGATATCCTCATCAAGTCACCAAACACCCCG
CGCAGGTCACTCTTTGTTTTATGTATCTGTTTCCATATTGCAGAGCTTAG
CTTGAAAGTTTACCGGTGTTGGTAGACATCACAATGCAGCAAAACTGAAC
TGTAACTTTCAATACAAAAAGGAGACTTACCCATATTTTTGACTGTCCGA
CTCCAGTCTTTGTCCAGAAATGTGCAACCCACAATGCCACATTATGTAGG
CAACAAATGAATTGGTCAGTAGTTGATCATAAACTACATGTACCATAATG
AAGATTTTGATTCTATCATCTTTTTTTTATTTATTGCTTTATATGGCCGT
GGAAGAGGAGTTAAAGTTTAAATAAGAAACCATAGATACGATTTGTTTTA
CGTGAATTTTTGCTTGTGTTTTCCTGTGTCTTCATCAAAAAGGGAGGAAA
AGATCGATGACCTGAACCTGCTGTTCATCCACATGCACCACCTCATCAAC
GAGTACCGGCCGCACCAGGCGCGGGAAACTCTCCGGGTCATGATGGAAGT
GCAGAAACGACAGAGGCTGGAGACGGCTGACAGGTCAGTACAGTCGGGCC
TAACCATAACCACAGCCCTAACCCTAGCCCTAACCACAGCCCTAACCCAA
CGAGTGCCGGCCGCACCAGGCGCGGGAAACTCTCAGGGACATGATGGAGG
TGCAGTAACGACAGAGGCTGGAGACGGCTGACAGGTCAGTAATAACCCTA
ACCTGTACCAGTGTTCTCGCCAGGCCTTTTCAGCATAGGGGCCCCCTATG
CTGTGATTTGGACCCCCTATGCTGTGATCTGGACCCCTATGCTGTGTTTC
AACCAGCATAGGGGTGCTTCTTTCTGGGACAAACCTTGTGACCCTTCATA
AATCTTATAAAAAGTTCATATTTGGCTTTAGAATGAGGCTGTGACAGAGG
AAAAACTCTACTTCACAAAATTTGTCCCTCAAAATGCATGAAATAATGTC
TCATTGGGTTATGAATTTACAAATTTTCCAGGAGAACATGCCGGACTCCC
TACTCTGGTCACTCCACGCATGACTTGCACCGCGTTAAGTTGGCCTTCTG
TACCTGACCCCTATGCTGTGAAAAAATCCTGGTGAGAACACTGTGTACCC
TAACTCTAACCTAACAAGTACCGGCCGCACCAGGCGCGGGAAACTCTCCG
GGTTATGATGGAGGTGCAGAAACGGCAGAGGCTGGAGACAGCCGACAGGT
TTGTACAGATGTGCCCAACTGTAGTGTTAAAAGGAAAACAACAATTCCTC
AACCACCACTTGCTAACCACTGGTCTGCATTCTGGCTATGCAGCAGTACC
ACCTAGCAGATTATGTAAGAACTGCAGCATGATACAATGATTCTGTTTTC
CCCACCCCAGGTTTCAGCAGCACCTGGACCGCGTCATCGACATGCTGAAG
CAGTGCGTGCAGTCCATGCCTGAGGACATAGGGGGCGCCTCTGACAGCGA
GGACATCAAGCCGGACCTGGAGGAGCTGAACAGACAGGCGGGGATCTCGC
AGAGCAAACGTGACGAGGACTATGGGAAAGACAGACTAATGTGCAGCATA
GTGGACAACATCAAGTCATGATGAACATTCTTAGCTTCCAACCAGGGTTG
AACAAGTTTTCAAAAATTCACTTGCCCTATCGGGCAAGTAGAAAAAAAAT
CTACTTGCCCGAACCAACTTTTGACTTGCCCGAAATCTAAATGACATTTT
TTCTTTGCATCTTTGCTTGCGGTAATGAATTCTGTTATTTTTCAGTAAAA
ACGTCTTGTTAAGCATGTAATTATAGCAAAAAAGTTTTAACTACAAGACC
AAGCTGTGTGGATGTCATGACCGTATTTACGGGAAATGACAAAAACTTGA
ACAAGAAGCATGATATTACAACGTATCTTCTTTCACTTAAACCACGCCAA
TTTCATTTGTTGCTTCTCAGATTTTTCAGAATAAAATCAGAGCGATACGG
AAAAAAAATTTGGCAAAAAGTCTAAGGTAAAGACACAGGCTTATTTAACA
TAAAGAACAACATTCAAGTTTTCAGCAAATGTTGTGTATCGATCATTCCT
TAGATCCAGTACTACAATATTCCTGTGTTCACTGAGGGCTATTATTATTC
TCCCATTTCTTTAGTAAACAGAAGAAAAAATCAGGTATTTGTCATATGAT
GGAAAAGTTACATTTAGAGTGTTGTGGATCTAATATAACTAAACATGGTT
CTTATGATATGGCCAGTTTTGAATCATTGTCGTAAAATTNAAAAGTTACA
TTTAGAGTGTTGTGGATCTAATATAACTAAACATGGTTCTTATGATATGG
CCAGTTTTGAATCATTGTCGTGAAATTTTTATTTTCTAGATAACATTAGT
CAATATCAATCCACACATGTACATCAAACAACACCTTCAAATGATTTTTT
GCAGTATTAACATTTAGAAGTTGAACAGAAATTTAGAATATCCTGAATAT
ACACTCAATCAGTTAAAATGTTGTGGGAACCCTCAGAGTGTGTCATATCC
ACAATGTTGCTGTTCAATGAAAGAAGGAAAATGCTACATTGAGAGAGTGC
TCACAGGGATATCATGTTTCAAAGGATTTGATGTTGCAAAGTTTCATGCC
AGCAGGTCTACGAACTGAGAGAGCCATGGGTGTTTGTTTACATGTACTAT
GTGAGCCAAATTGTCCTGTTTTGGGTTGAATTCATAATCTTTTGGAATAT
TTTGAAAGAAATGTAGTTTCTAATGATAAGATACATTGTGGTGTGGTGTT
TTTGTGATCCTTTCACTGGAATAAAGTTTGTTTTGAAACAGACTGCATGA
AAAAATCTTACTTGCCCGATCGGGCAAGTGGGGGAGGATATCCACTTGCC
CGAACAGCACTTTCACTTGCCCCGGGCAATCGGGCAACCATACTTGTTCA
ACCCTGCCAACACAAGGAGTCTGTCTGATTTTGTAGATTTGCACTGTACC
CTTTATAGGCCATATTGTATCCAGTCTGACTATGGAAAGACAGAGTCATG
TACAGCATAGTGGACAACATCAAGTCATGATGAACATTCTAAACTTCCAA
CCTCCAACACAACAAGAAGTCTGTCCGATTTTGTAGATTTGCACCGTAGC
CTTCATAGGCCATATTGCAGACAGTGGAATTATGAGTAGGCAAGAGACAC
ATGCTATGAAAACGCATATGGGGCCGTGCATACTGTGTCCGGTCTGACTA
CGGAAAGACAGATTCATGAAAAGCATTGTGGACAACATCAAGTCATGATG
AACAGCTGAATATGTTTGGCAACATAATTAAGTATATAAGAATAAATATT
GTCAGTATTGTTCCCAAATCTAGTTAGCTCACGAGCTGATCTTCCATTGG
TCGTAACAGGAAAAACGATATGTACAGATCATACAGTTTCATTGAACAGG
CAAATTCCCCTAGCCCTTTTTGACAAGTATACTGTATTAGCATACAGTTG
AGAGCCTAACAACTCTGACTTTTAATGTTAGGGATGAAATAGGTCTCAAG
CAAGGAGTGACTGGAAATCAGTAAGTGGACTACTGCTGTACTGATTCCTA
CACCATGTTTGTCATAGCCTGTGTTACCCAGTTTCTCACTGCCAGGGACT
AATCCCCCTCCCCAAGACCCACAGTCAAGCGAGCCACTAGGAGCATGAAC
AGTAAGGCCATGTGGTCCATATCTGTTTCTCATTGGCCCACACCTCTGTG
CAAGCACTACAGCAAGGGACTGGCTGAGTTCTCTACATGTCCCTACTGGG
CCATTGCAGCAGTCAGTGAACAATATGAAGGATGTGTTCACCTGTACATA
CCGATCACATACATGTAGATGTATCCAGTAATATCACCTATTTATTAGGT
GCCTTGAAGGCAAAGGAGATGCAAAACGGAATGGGCATTAGCATAACTGC
AAGATTTCATGCCAACTAGACCAATGACATTATCCAGATTTGTCATGTCC
TTGACTGGACCAAATGTAACAAGGCCACAGCTTACAAACCTGTTTTCTTA
ATTCCTAGACTTGAGCTGATTTGGTAATAAATGGTGTCGCAAAATAAGCT
TTTATTGGGATCATTTTATACAACTTTGTCTTGTTCTTAACTCATCGATC
TTATTAGGTTATCACTTAGCCTGAGTACCAGCCTGTTTATCTATTGTCCG
CTCCCCACAATCCGCTACCAGATCGTGAGGAGCGGACGAAAGCTAAAAAA
GGCTGGTACTCAGGCTAGTCATTACTAGAAGGATTTGACCTCAAAAGTTT
TCAATCAAACCTTACTGTAGCTTTTCTAAGGCTATAACAAACCTCGCTCA
TGCCTGTGTAAAACCCTGGGACCTATGTGCCCATGACACAAGACATATCT
ACAGCCCTTTTTCCAATGAAACATTATCCCACACT Coding sequence (CDS) from alignment at Sc0000042:338337..343771+ >Blg00516.9 ID=Blg00516.9|Name=Blg00516.9|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000042:338337..343771+ (Branchiostoma lanceolatum)
ATGGCAGAAGGTGAGGGTGAGGCCGGGGTGAGCGCCATGCCCCTCCCTCC
CATGCAGTTCGTCAGCCAGTACACGACGGAGAACGTTTCCCGCGGCCTGG
CGCCCCCGCCGCCTCCACCAATCACAGACCAGTACTCCATGTTCGGCAGC
GACTACCAGGTGGACGACCAGATCATCCGACCGCTGGAGTCACAGGGAAT
CCGTCGTCTCCACCCCGACAAGTTTGACCACAAGCTGGAGCTGAAGAAGC
TGAACCACTCCATCCTGGTCAACTTCCTGGACCTGCTGGACATCCTCATC
AAGTCACCAAACACCCCGCGCAGGGAGGAAAAGATCGATGACCTGAACCT
GCTGTTCATCCACATGCACCACCTCATCAACGAGTACCGGCCGCACCAGG
CGCGGGAAACTCTCCGGGTCATGATGGAAGTGCAGAAACGACAGAGGCTG
GAGACGGCTGACAGGTTTCAGCAGCACCTGGACCGCGTCATCGACATGCT
GAAGCAGTGCGTGCAGTCCATGCCTGAGGACATAGGGGGCGCCTCTGACA
GCGAGGACATCAAGCCGGACCTGGAGGAGCTGAACAGACAGGCGGGGATC
TCGCAGAGCAAACGTGACGAGGACTATGGGAAAGACAGACTAATGTGCAG
CATAGTGGACAACATCAAGTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00516.9-exon-Sc0000042-1570713199:338337..338850 | Blg00516.9-exon-Sc0000042-1570713199:338337..338850 | Branchiostoma lanceolatum | exon |
| Blg00516.9-exon-Sc0000042-1570713199:339162..339289 | Blg00516.9-exon-Sc0000042-1570713199:339162..339289 | Branchiostoma lanceolatum | exon |
| Blg00516.9-exon-Sc0000042-1570713199:339779..339919 | Blg00516.9-exon-Sc0000042-1570713199:339779..339919 | Branchiostoma lanceolatum | exon |
| Blg00516.9-exon-Sc0000042-1570713199:340747..340945 | Blg00516.9-exon-Sc0000042-1570713199:340747..340945 | Branchiostoma lanceolatum | exon |
| Blg00516.9-exon-Sc0000042-1570713199:342405..343771 | Blg00516.9-exon-Sc0000042-1570713199:342405..343771 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:338337..343771 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00516 |
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