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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:337469..343771+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00516.3 ID=Blg00516.3|Name=Blg00516.3|organism=Branchiostoma lanceolatum|type=mRNA|length=6303bp|location=Sequence derived from alignment at Sc0000042:337469..343771+ (Branchiostoma lanceolatum)
CCGATACTGTCATGGCGGCCGCTTAAAAAAAATCACGAGAACGCTGAAAA
CACATCTCATNAATAAACAGTCATAAATCAAATGATATATCCGATCTTTG
AGCTTTCACAACTCCTGCAGACCTTTACTTCCGGGTAATTTGGCGGGAAG
ACCTACTTGGAAGGGTCGTTTCTTTAGCTTCTTGGACAGGTAAAGAAGTA
AGAATGAAGTCTTACCTGTTATCTGGATTAAAATAGGATCAGTGGAAGCC
CAGGCGGCGACAGGAGAGAGATTAAGAAACACGAGCTACAAGTTACAAGT
TACCGTGTCTGAATGTGCTGCTTAGGAAATGAACACCCCTTTCTCAGGCT
CCCGTCCGATTGGTCAATTTGTGGAAAGGAGTATTTTTGGAATGGGGAAC
TTTTCCGTCACTTCTTGTATGTTAATATTTTGAACAGTCTTAAAGGGATA
CGCTAGTAATGTAAAAAATGAATGATTCATGATAATAATGAATTATATTT
GCTCATGAATAAAATCCATTTTGTGCATGGAAACATGGTTTTGCAAAAAT
AATAAGAAACACCCCTTTATCTAAAATAGATTCAGCCGATACTGTCATGG
CGGCCGCTTAAAAAAAATCACGAGAACGCTGAAAACACATCTCATCAGGG
GCGATTTCCTCGAATTTGTAGCAGAATTATCAACTTTCTTGTATCTTCTA
GAAGTTAAGGTACGTTATTTAAGTCCTACTTTCCTTACCTTAAGTACGTA
GATTGAAATAATGACGTATAATATGTGACGGCAATCGGACCTGCATGAGA
AATATTATATGGGGTGGGGGGTTTGTTTTGTTCCACCCTTTGTCATATTT
ATTTATTTCTTTGTCATATTAAAATCATAAAATGCCAGCCTTTTCTTATC
GCATATCTAGCTTCATAGCTTCATACTATGTCGCATGCTGAGTATGTGTT
TGCCTCTGCTACTGACTGCCAGGGCAAAATGAGAATTTTTTTTCAAAGAA
GGTGCAAATGATTGGAAAGTATAAAATGATTTTTATCTTTCATCACATAG
CTTCAGAAGTTAAGAACTTAAGATAGTGGGAGATATATTTAAGAACTAAT
GGTGAATAAAATGTGCAAAGTGTTATGATAATTTGAAATGATAAACTTAA
AGTTAAACTTTAATTTTTCATCACAGAACTGCAGAAGATGGCAGAAGGTG
AGGGTGAGGCCGGGGTGAGCGCCATGCCCCTCCCTCCCATGCAGTTCGTC
AGCCAGTACACGACGGAGAACGTTTCCCGCGGCCTGGCGCCCCCGCCGCC
TCCACCAATCACAGACCAGTACTCCATGTTCGGCAGCGACTACCAGGTGG
ACGACCAGATCATCCGACCGCTGGAGTCACAGGTCGGAAGGGAAAGACAC
GCTGTTTCCATAAAAATACTCTTTACTAGTACAAGGGCTGCCGAAACAGA
GATGGGCACTGCCTTATGCACCTTCGGTGCGGGGAGGACTTTAATCCTGA
AAGTGAAAGGATGCATCCGTGAATAAGTTTGTATATCACTAGTACTTGCC
AATGCTTTTATGACTGTTTGTCACCTTCCTCAGGGCAGTACTGACTGGTT
CTACTTGCAAACCCAAAAGTCACTGAGTTTGTATCCCCCTCATCATCATC
AATGTACATGTAGAATTTACTCTAACACTGCCTTCCTCTGCAGGGAATCC
GTCGTCTCCACCCCGACAAGTTTGACCACAAGCTGGAGCTGAAGAAGCTG
AACCACTCCATCCTGGTCAACTTCCTGGACCTGCTGGACATCCTCATCAA
GTCACCAAACACCCCGCGCAGGTCACTCTTTGTTTTATGTATCTGTATCT
GTAACTGTATCCATATTGTAGGGCTTAGACTGAGGCTGGATATCCTCATC
AAGTCACCAAACACCCCGCGCAGGTCACTCTTTGTTTTATGTATCTGTTT
CCATATTGCAGAGCTTAGCTTGAAAGTTTACCGGTGTTGGTAGACATCAC
AATGCAGCAAAACTGAACTGTAACTTTCAATACAAAAAGGAGACTTACCC
ATATTTTTGACTGTCCGACTCCAGTCTTTGTCCAGAAATGTGCAACCCAC
AATGCCACATTATGTAGGCAACAAATGAATTGGTCAGTAGTTGATCATAA
ACTACATGTACCATAATGAAGATTTTGATTCTATCATCTTTTTTTTATTT
ATTGCTTTATATGGCCGTGGAAGAGGAGTTAAAGTTTAAATAAGAAACCA
TAGATACGATTTGTTTTACGTGAATTTTTGCTTGTGTTTTCCTGTGTCTT
CATCAAAAAGGGAGGAAAAGATCGATGACCTGAACCTGCTGTTCATCCAC
ATGCACCACCTCATCAACGAGTACCGGCCGCACCAGGCGCGGGAAACTCT
CCGGGTCATGATGGAAGTGCAGAAACGACAGAGGCTGGAGACGGCTGACA
GGTCAGTACAGTCGGGCCTAACCATAACCACAGCCCTAACCCTAGCCCTA
ACCACAGCCCTAACCCAACGAGTGCCGGCCGCACCAGGCGCGGGAAACTC
TCAGGGACATGATGGAGGTGCAGTAACGACAGAGGCTGGAGACGGCTGAC
AGGTCAGTAATAACCCTAACCTGTACCAGTGTTCTCGCCAGGCCTTTTCA
GCATAGGGGCCCCCTATGCTGTGATTTGGACCCCCTATGCTGTGATCTGG
ACCCCTATGCTGTGTTTCAACCAGCATAGGGGTGCTTCTTTCTGGGACAA
ACCTTGTGACCCTTCATAAATCTTATAAAAAGTTCATATTTGGCTTTAGA
ATGAGGCTGTGACAGAGGAAAAACTCTACTTCACAAAATTTGTCCCTCAA
AATGCATGAAATAATGTCTCATTGGGTTATGAATTTACAAATTTTCCAGG
AGAACATGCCGGACTCCCTACTCTGGTCACTCCACGCATGACTTGCACCG
CGTTAAGTTGGCCTTCTGTACCTGACCCCTATGCTGTGAAAAAATCCTGG
TGAGAACACTGTGTACCCTAACTCTAACCTAACAAGTACCGGCCGCACCA
GGCGCGGGAAACTCTCCGGGTTATGATGGAGGTGCAGAAACGGCAGAGGC
TGGAGACAGCCGACAGGTTTGTACAGATGTGCCCAACTGTAGTGTTAAAA
GGAAAACAACAATTCCTCAACCACCACTTGCTAACCACTGGTCTGCATTC
TGGCTATGCAGCAGTACCACCTAGCAGATTATGTAAGAACTGCAGCATGA
TACAATGATTCTGTTTTCCCCACCCCAGGTTTCAGCAGCACCTGGACCGC
GTCATCGACATGCTGAAGCAGTGCGTGCAGTCCATGCCTGAGGACATAGG
GGGCGCCTCTGACAGCGAGGACATCAAGCCGGACCTGGAGGAGCTGAACA
GACAGGCGGGGATCTCGCAGAGCAAACGTGACGAGGACTATGGGAAAGAC
AGACTAATGTGCAGCATAGTGGACAACATCAAGTCATGATGAACATTCTT
AGCTTCCAACCAGGGTTGAACAAGTTTTCAAAAATTCACTTGCCCTATCG
GGCAAGTAGAAAAAAAATCTACTTGCCCGAACCAACTTTTGACTTGCCCG
AAATCTAAATGACATTTTTTCTTTGCATCTTTGCTTGCGGTAATGAATTC
TGTTATTTTTCAGTAAAAACGTCTTGTTAAGCATGTAATTATAGCAAAAA
AGTTTTAACTACAAGACCAAGCTGTGTGGATGTCATGACCGTATTTACGG
GAAATGACAAAAACTTGAACAAGAAGCATGATATTACAACGTATCTTCTT
TCACTTAAACCACGCCAATTTCATTTGTTGCTTCTCAGATTTTTCAGAAT
AAAATCAGAGCGATACGGAAAAAAAATTTGGCAAAAAGTCTAAGGTAAAG
ACACAGGCTTATTTAACATAAAGAACAACATTCAAGTTTTCAGCAAATGT
TGTGTATCGATCATTCCTTAGATCCAGTACTACAATATTCCTGTGTTCAC
TGAGGGCTATTATTATTCTCCCATTTCTTTAGTAAACAGAAGAAAAAATC
AGGTATTTGTCATATGATGGAAAAGTTACATTTAGAGTGTTGTGGATCTA
ATATAACTAAACATGGTTCTTATGATATGGCCAGTTTTGAATCATTGTCG
TAAAATTNAAAAGTTACATTTAGAGTGTTGTGGATCTAATATAACTAAAC
ATGGTTCTTATGATATGGCCAGTTTTGAATCATTGTCGTGAAATTTTTAT
TTTCTAGATAACATTAGTCAATATCAATCCACACATGTACATCAAACAAC
ACCTTCAAATGATTTTTTGCAGTATTAACATTTAGAAGTTGAACAGAAAT
TTAGAATATCCTGAATATACACTCAATCAGTTAAAATGTTGTGGGAACCC
TCAGAGTGTGTCATATCCACAATGTTGCTGTTCAATGAAAGAAGGAAAAT
GCTACATTGAGAGAGTGCTCACAGGGATATCATGTTTCAAAGGATTTGAT
GTTGCAAAGTTTCATGCCAGCAGGTCTACGAACTGAGAGAGCCATGGGTG
TTTGTTTACATGTACTATGTGAGCCAAATTGTCCTGTTTTGGGTTGAATT
CATAATCTTTTGGAATATTTTGAAAGAAATGTAGTTTCTAATGATAAGAT
ACATTGTGGTGTGGTGTTTTTGTGATCCTTTCACTGGAATAAAGTTTGTT
TTGAAACAGACTGCATGAAAAAATCTTACTTGCCCGATCGGGCAAGTGGG
GGAGGATATCCACTTGCCCGAACAGCACTTTCACTTGCCCCGGGCAATCG
GGCAACCATACTTGTTCAACCCTGCCAACACAAGGAGTCTGTCTGATTTT
GTAGATTTGCACTGTACCCTTTATAGGCCATATTGTATCCAGTCTGACTA
TGGAAAGACAGAGTCATGTACAGCATAGTGGACAACATCAAGTCATGATG
AACATTCTAAACTTCCAACCTCCAACACAACAAGAAGTCTGTCCGATTTT
GTAGATTTGCACCGTAGCCTTCATAGGCCATATTGCAGACAGTGGAATTA
TGAGTAGGCAAGAGACACATGCTATGAAAACGCATATGGGGCCGTGCATA
CTGTGTCCGGTCTGACTACGGAAAGACAGATTCATGAAAAGCATTGTGGA
CAACATCAAGTCATGATGAACAGCTGAATATGTTTGGCAACATAATTAAG
TATATAAGAATAAATATTGTCAGTATTGTTCCCAAATCTAGTTAGCTCAC
GAGCTGATCTTCCATTGGTCGTAACAGGAAAAACGATATGTACAGATCAT
ACAGTTTCATTGAACAGGCAAATTCCCCTAGCCCTTTTTGACAAGTATAC
TGTATTAGCATACAGTTGAGAGCCTAACAACTCTGACTTTTAATGTTAGG
GATGAAATAGGTCTCAAGCAAGGAGTGACTGGAAATCAGTAAGTGGACTA
CTGCTGTACTGATTCCTACACCATGTTTGTCATAGCCTGTGTTACCCAGT
TTCTCACTGCCAGGGACTAATCCCCCTCCCCAAGACCCACAGTCAAGCGA
GCCACTAGGAGCATGAACAGTAAGGCCATGTGGTCCATATCTGTTTCTCA
TTGGCCCACACCTCTGTGCAAGCACTACAGCAAGGGACTGGCTGAGTTCT
CTACATGTCCCTACTGGGCCATTGCAGCAGTCAGTGAACAATATGAAGGA
TGTGTTCACCTGTACATACCGATCACATACATGTAGATGTATCCAGTAAT
ATCACCTATTTATTAGGTGCCTTGAAGGCAAAGGAGATGCAAAACGGAAT
GGGCATTAGCATAACTGCAAGATTTCATGCCAACTAGACCAATGACATTA
TCCAGATTTGTCATGTCCTTGACTGGACCAAATGTAACAAGGCCACAGCT
TACAAACCTGTTTTCTTAATTCCTAGACTTGAGCTGATTTGGTAATAAAT
GGTGTCGCAAAATAAGCTTTTATTGGGATCATTTTATACAACTTTGTCTT
GTTCTTAACTCATCGATCTTATTAGGTTATCACTTAGCCTGAGTACCAGC
CTGTTTATCTATTGTCCGCTCCCCACAATCCGCTACCAGATCGTGAGGAG
CGGACGAAAGCTAAAAAAGGCTGGTACTCAGGCTAGTCATTACTAGAAGG
ATTTGACCTCAAAAGTTTTCAATCAAACCTTACTGTAGCTTTTCTAAGGC
TATAACAAACCTCGCTCATGCCTGTGTAAAACCCTGGGACCTATGTGCCC
ATGACACAAGACATATCTACAGCCCTTTTTCCAATGAAACATTATCCCAC
ACT Coding sequence (CDS) from alignment at Sc0000042:337469..343771+ >Blg00516.3 ID=Blg00516.3|Name=Blg00516.3|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000042:337469..343771+ (Branchiostoma lanceolatum)
ATGGCAGAAGGTGAGGGTGAGGCCGGGGTGAGCGCCATGCCCCTCCCTCC
CATGCAGTTCGTCAGCCAGTACACGACGGAGAACGTTTCCCGCGGCCTGG
CGCCCCCGCCGCCTCCACCAATCACAGACCAGTACTCCATGTTCGGCAGC
GACTACCAGGTGGACGACCAGATCATCCGACCGCTGGAGTCACAGGGAAT
CCGTCGTCTCCACCCCGACAAGTTTGACCACAAGCTGGAGCTGAAGAAGC
TGAACCACTCCATCCTGGTCAACTTCCTGGACCTGCTGGATATCCTCATC
AAGTCACCAAACACCCCGCGCAGGGAGGAAAAGATCGATGACCTGAACCT
GCTGTTCATCCACATGCACCACCTCATCAACGAGTACCGGCCGCACCAGG
CGCGGGAAACTCTCCGGGTCATGATGGAAGTGCAGAAACGACAGAGGCTG
GAGACGGCTGACAGGTTTCAGCAGCACCTGGACCGCGTCATCGACATGCT
GAAGCAGTGCGTGCAGTCCATGCCTGAGGACATAGGGGGCGCCTCTGACA
GCGAGGACATCAAGCCGGACCTGGAGGAGCTGAACAGACAGGCGGGGATC
TCGCAGAGCAAACGTGACGAGGACTATGGGAAAGACAGACTAATGTGCAG
CATAGTGGACAACATCAAGTCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00516.3-exon-Sc0000042-1570713199:337469..337521 | Blg00516.3-exon-Sc0000042-1570713199:337469..337521 | Branchiostoma lanceolatum | exon |
| Blg00516.3-exon-Sc0000042-1570713199:338107..338177 | Blg00516.3-exon-Sc0000042-1570713199:338107..338177 | Branchiostoma lanceolatum | exon |
| Blg00516.3-exon-Sc0000042-1570713199:338645..338850 | Blg00516.3-exon-Sc0000042-1570713199:338645..338850 | Branchiostoma lanceolatum | exon |
| Blg00516.3-exon-Sc0000042-1570713199:339162..339250 | Blg00516.3-exon-Sc0000042-1570713199:339162..339250 | Branchiostoma lanceolatum | exon |
| Blg00516.3-exon-Sc0000042-1570713199:339353..339391 | Blg00516.3-exon-Sc0000042-1570713199:339353..339391 | Branchiostoma lanceolatum | exon |
| Blg00516.3-exon-Sc0000042-1570713199:339779..339919 | Blg00516.3-exon-Sc0000042-1570713199:339779..339919 | Branchiostoma lanceolatum | exon |
| Blg00516.3-exon-Sc0000042-1570713199:340747..343771 | Blg00516.3-exon-Sc0000042-1570713199:340747..343771 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:337469..343771 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00516 |
|
