|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1034881..1040932+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00502.0 ID=Blg00502.0|Name=Blg00502.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6052bp|location=Sequence derived from alignment at Sc0000042:1034881..1040932+ (Branchiostoma lanceolatum)
ATGGCCGACTGTGACAGTGCATATCGAGTTGTTTGTGTGTCTGTAGTCTT
GATCTTTGTTCTAACAGGCGGCGGATCGGGTAAGGTAGTTTATCTACGCA
CAATGACACTTGTTAGTCTTTGCAAGCGAGGCAAACTGATCAGACTCAGA
CCAGCCATATTTCATTTAACTTTGTGATCATGACGTGTTCCCGAGAACAA
GGTTTATCAACATTAGACGTCCACTTACATGAATGGAAACACTCTTCCAG
CACGATTAACAACGTTAACTGTATGCGCAAAGGTGAGAGGTTGCGTAATG
TAGGGTGTCACTTCGAAGTAACCTTTGACACAGTTTTCAGCTGGCAAGGT
TGAGAAACCGTAGCTACAGGAACGTTTTATTATATGATATGTTTGTTTTG
GAAGTGAACAAAACGAAAACAATTGGCATCACTGTTTAACTCTTCTGACA
GGTACAATGGAAACATGATTTGTTGATGAATGGCTGGAAATACGATTACT
TTGAGCGTCCTTTTCGACGAGAAAAGTTGACGTTATCAACACTTGTCCCA
GATGCCGCTGTTGTCTCCACCACCCATGGTGACGTGAGAGGTTCAGAGTT
CATGACCTCCTCTGTTGTCGGAAATGCCGTCTTTGACCGCGTCTTCACCT
TCAAGGGGATTCCTTACGCCGCTCCGCCCGTGGGGGACCTCAGGTAGATG
TTAGGTTGAGAAAGGAAAGAACAAATGGGCTATTTACTTATTATCATTTC
AGTTACATAGTCGCGTTGAGTAATACTATAAGAATCAAATGAATATGTGA
TAGGTTGAATGAACTGTCAATACATAAGTGTAGCATCGCCGAATGGTTAC
GAGTTTGATCCAAAAGCGGGAGGTCCTGGGATCATAGCCCTGACAGACCC
CAATATGGCGCCCTTGGGAAAGGCACTTGCCGCGAACCGTCGTATTTCAC
CACTCCAGAGAAAACCTCAAAACAGGACGTTCCGCTGCAGTATCGTATCA
AGCTGCTAGGGTACCCAAAATGTAATCATTTCTAGGTCTCATCAAGACCT
ACCCACCTACCAAATATAAAGGCAATCCATCCAAACCTTCTCGAGTTACA
TTGGCGAAGGTAATGAGTAGCTAGCTTCAGTTAGAGACGTCCTTATGATG
GATGTATAATTGAGAACCCTTTTAGGGCATATCTCGCCGAGAAATACTGT
GTTCTGCGACCTTGAAATAGGCTGGAACCTTATGCGCCTGCGTGTTATAG
TGACCTTTGACCTGAATATCCTTCACACCGCTAGATGGCGCCCTCCCCAG
AACCCGGGCAGCTGGACAGGTGTCCGTGACGTCACAGAGTTCGGGTCCAG
ATGCCAACAGATCGAGTTCTCGCTGCCTCATCCGATCTACAGCGAGGTCC
TGGGGTCCCGCACTAACACCAGCAGCAGCGAGGACTGCCTGTTCCTGAAC
GTGTACACTCCGAACGTTTCCGCCACTGCCAACCTGCCGGTACGATATCC
TGCCTTTGTTATCCTGCCTTTGTTATACTGAGTAAAGTATGCCCTGGTAT
GTATTAAGGTAATGAGTTGTGCACTGAGGTCAACTACAGATTTCTACTGT
CACAACTTTGATGGCATTTTAATGTTTGCCTGCTTATATGCCAGTGAGAT
GTAATTCAGAAGTATACAGTAACTATAATATTGTTATTTCTGTAATGTTG
AATAAAGACTAAAGATAAAGGCAGCTGGATATGACGGTGTGAATTTATCA
GAGAGTCATTAACATCTATTCCGGCATTGCTTGCCAAGCTAAATAATGTT
TTCTCTCTTAGTTGATCACATGAGACAATGCCTCTCTTCGCTGCATCTTC
AATGGATATGCATGTGTACCATCTGCTTCAGGTGATGGTGTGGTTTCATG
GCGGAGGTTGGCTCTATGGCACTGGCGCAGGCTACCCGGCTGAGATCCCA
ACGTCACTCCATAACGTCGTCATGGTAACCGTAAACTACCGTCTGGGCAA
CCTGGGCTTCCTGCCGACCCGGGACGATGACGCACCGGGCAACTTTGGTC
TCCTGGACATGGTTAGACTGTCCCCTTCTAGCACAAGTTCTCTCAAGTTT
TATTCTTAATAACTTCACCTCAAGGGAGTGAGGTAATATGTTTGCTTGTC
TGTTTGTTTATGTGTGTGTGCGTGTGCGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAGCA
TTTCCTGATAGTCTTATCAATCATCCTCAATCTTGAATTTGACCAGGATA
GCTGTTTCATTTAGCTACCACTATTGACTGACGAACCCTGCACTATCCTG
TCACAGATAAAGTCCCTGAAATGGGTACGAGGCAACATCCGGAACTTCGG
AGGAGATCCCGACAGAGTCACCATATTTGGGGAGTCAGCTGGAGGCTGGG
CCGTCTCCCTGCTCGTCATGTCTCCCATGGCAACGGGACTGTTCCACCGG
GCCATCTCTCAGAGCGGCGTGGCGGGAGTTCCTGTCACCCAGAAAGGTGA
CCTCACACAAACGGAAATTCTCGCTCGCGAGTTGAACTGCAGCACGGCCT
CCTACGATGACATGATGAGCTGTCTGCGAGGGTATGTTCACGTTGGTTTG
GAGACGGTCAAAGAAAAAATTGCAGCTGCTGAGCGTCCAGACCACTGCAG
CAGTAGAGTAAAGTGGACTGCTTAGTCGATCTGTATACTTGACTTAGAAG
AAATTTTTTGTCATAACATACAAAAGTTCCCTTTAATGCTAAACCCACTA
CAGTATCGAACAAAACCAACACCATAGGTCCTGTGATCTTATTAGTAATT
GTTCAATCAACCTGACGTCAAGAATACGTTGTTGCTCCTGACAGGTTGCC
GCGTGAGGAAGTCTCAACGTTGATGGTTCAGTCCGTGGTCATCGATGGCA
GGTTCCTCTTGCAAAGTCCTTGGGTTAGAATAATGCTTTATTGTGCCAGC
TACATATCATTGTGTCGAACTATGTTCATTAGGTCTGATGGTGCAGATTA
CTAAGCACATGAACTGGTCCTATGGCAATGGTGATATTGTACCTGATTTA
GCCGTTGATTGCATTGCCGCGTTGTCATTGGTGACGGTGGCTGAAAGTTG
GTACCGGCTCCGTCCAGGTTCAATAAAGGTCGATGAGCTCCGATGTAGAT
AGCTCTTTCACGGAGTAATGTAAGTGGGATTGGATGTGCTGTAAACTTCA
GTCCACTCTAGTATATTAGACAAAAGTGGGTTGATTTCAAATTAGGTGAT
GTACTAAAAAATTATACGGTTCTTGGTTACGAATGTGCTAGATGTTGGCA
CATCGGCAACCAAATCCGTATTGTGGTTTTGGCACACCTTTAGGCGTCCC
TCCACCGCCAGGGAAAGTCGTGTAAAGTGCCTTTCCCAAAGGCACAACGT
CGGGGCATGGTGAGCATTGAACTTGGAACCTATTTGTTCTGAGTCGAACG
CTCTAACCGTTGCACCACACCGACGCTGATGTACTAAAACATCCATGCTA
ATTCATGATGCTTATATCGCAGGACCTGATGAACCACAAGTTCATCAACA
GAGTGGACTACCTCCTGGGCACAAACAACGACGAGTTCGGGTTCTACCTG
TCGTCAGAGTCCCCTTACATCGACGCAGACGGGATGACCAGGGCTGAGTT
TGAAACCTACCTGCCGTACGATCTACAACAGGTTGCCGACCAGTACTTGG
TAAAAAAAACACGCCTGAATCTGATTATATTTAATACTGTGTATGTTAGA
TGTCGTGTTTACTTCTTTCCAATACATTTTGTGAACAGCTGATAGGAACG
TTTCCTGCAGCAAGTTCATGTATGATTGGATAGTATCTACATCTATGTAG
CTGGTATAACCGCCTTCCGGTGTACCACATTAGCTTATGTGGTGAAAGTT
AGATACTACATTATAGCATGTGGTATAATCTGAAAACTGAATCTAAAGCT
GTAAATGATAGAACTTGTAACCATTATAGAATGAATGAAGACCTTTATTG
CACATTTCTGCCACACTTGGCTAAGTACAGGTCGCAACAAAACAAAATAC
AAGTACGGTGAACAAGATATAAAAGAGTATGACTATGACTATCATTATAA
CTTCTTGTGGTTTTTGTGAAGCCCATCATGTGAACATCATGGATCCCGTT
TTGCTCCTTACTCCTTCGTAGCTTCCTTAATTCGCAGACTTCCCGGAACG
GCGGCTAAATTCCGAGGGGGGGGGGAACTTTCGACGCCTATTTAGTTATG
TCACCGATGGAGTTATGTCGCCTGAGGGCCGATCGCCTCTCCCACCATAT
GTATCGACGACATAGCTCCCTCGGCGGCAAAAGTCCCTACGCCGGCATTA
GAGAACTTTGGCCCGTGTAAAAAATCGCGTAACCCCCCCTCCCAATATAC
GCCGCCGTTCCAGAAAGTCTGCGAAGGAGGCTAACTCCTCGCGTCTTTTA
TTCCATAGAGCGGAAGTGTTGACACGATCCTACAGCCTGTTATGGACGAG
TACCTGGACCCGGGCATGGCGGACGATCCGATCTACCTGCGCGACCAGTA
CCTCCAACTCCTGATGGACGCCTGGTTCACCGCACCGACAGTCATGATGG
CTAAGGCCGAGTCAGGCATGCCGGCAGTGGCGTGGGAGGGTAAGAAAGTC
TCATATTCGTGTGTTTATGAATGTTAAACATCCAGGTAAGCAAATAGAGC
AGTACAATTCAAACTTTACATCTGGATAAAATTGCGATAAAAATCGGACG
TTTCGGGCGTCCATCCGACTGCCCTTTTTCAACAAGAAGTTTACTTATGG
ATGCAAGTAATGGGTCATATTCGTGTGGTAAAAGAGAACGACATTCTGAC
ATCATTCGAATATTTGTTAGAAATCATAAGAGTCAACGCTGTCGTAGCAT
GGGGAGGTAAGAAAGTCATATATTCACTACACGTCTTCTCGGATGGGACA
TAAAACCGGAGGTCCCGTGCGTTGTCGAGGAGATCCACGTCTCGAGCTTG
GTAAACAGCCCACACACTTATCGGAAAGAGTAGGGCTCCGCTCCAGTGTC
GTACTGTTTGTTGCACTAAAAAGTACTTTTACATGTTGGAAACAGGCGGA
AATTTTAATACGGACTTGTTTCTCTACCCAGCCCCCCGCAGTCGAGTTTA
CCAGTACGAGCTGCAGCACAGCGCCTCGGTTTTCTCCTTCCGCCCGCCGT
ATGTAGGAGTTGACCACACCGACGACCTTTTCCTCGTGTTCGGCATCCCT
CTCCTGCGTGATGAGAAGGGTTCGTACTGGAAGTACAGCTTCACCCAGGA
GGAGAGAGACCTGAGTCTGGACATGATGGCGTACTGGGTCAACTTCGCCA
CTAACGGGTGCGTGCTTACATCGTTTGGTGAAGTGAAGATTAATTTGAAC
AATTCAAACGAAATACATATGGAACTCTTTGATATGACGTTAACTGAGTA
TAAAAACACCATCGTAAGTCGACGATAGCTATATATGGAATATCCAATCA
CGACAATCATTGATGACTGGAGGAGTCACAATGTTATATAAATGTAGTTT
TGCTGGAAGATTTAAAAGGTTGTAGTCAAGCAAAAGCTAAGCAAAGCAAT
GGACTATATATTGTACTATTCTACTACGCCTTTGTCAACATAATGATGGC
AACTGTTTTCCTTTATGCAAGAGGTGCTAATTTGATGGATTTTCTCCGTC
TGTTTTTTTTTTACAGGGACCCCAATGACTCCACAGGAGCGGCGCGCATG
CGTAACATGGTCCACTGGCCGCGTTACACTTCTTCATCCCAATCCTACCT
CCAGCTGAACGTGACGTCATCTGCTGACTTCAGGCTGCGGGAGTCCCGGA
TGAAGTTTTGGAACGAGGAGGTGCCGAGGCTGCTAGGAATGCACGTCCAC
AACCACCGCGCCAGGGCTGGCTTCAACGCTGGGACTCACGGGGCTTCACG
TAGCCTTTCTGTTCTGGCGTTTATGTTGGTTATGTCCTATCTGCTGGCCT
GA Coding sequence (CDS) from alignment at Sc0000042:1034881..1040932+ >Blg00502.0 ID=Blg00502.0|Name=Blg00502.0|organism=Branchiostoma lanceolatum|type=CDS|length=1764bp|location=Sequence derived from alignment at Sc0000042:1034881..1040932+ (Branchiostoma lanceolatum)
ATGGCCGACTGTGACAGTGCATATCGAGTTGTTTGTGTGTCTGTAGTCTT
GATCTTTGTTCTAACAGGCGGCGGATCGGATGCCGCTGTTGTCTCCACCA
CCCATGGTGACGTGAGAGGTTCAGAGTTCATGACCTCCTCTGTTGTCGGA
AATGCCGTCTTTGACCGCGTCTTCACCTTCAAGGGGATTCCTTACGCCGC
TCCGCCCGTGGGGGACCTCAGATGGCGCCCTCCCCAGAACCCGGGCAGCT
GGACAGGTGTCCGTGACGTCACAGAGTTCGGGTCCAGATGCCAACAGATC
GAGTTCTCGCTGCCTCATCCGATCTACAGCGAGGTCCTGGGGTCCCGCAC
TAACACCAGCAGCAGCGAGGACTGCCTGTTCCTGAACGTGTACACTCCGA
ACGTTTCCGCCACTGCCAACCTGCCGGTGATGGTGTGGTTTCATGGCGGA
GGTTGGCTCTATGGCACTGGCGCAGGCTACCCGGCTGAGATCCCAACGTC
ACTCCATAACGTCGTCATGGTAACCGTAAACTACCGTCTGGGCAACCTGG
GCTTCCTGCCGACCCGGGACGATGACGCACCGGGCAACTTTGGTCTCCTG
GACATGATAAAGTCCCTGAAATGGGTACGAGGCAACATCCGGAACTTCGG
AGGAGATCCCGACAGAGTCACCATATTTGGGGAGTCAGCTGGAGGCTGGG
CCGTCTCCCTGCTCGTCATGTCTCCCATGGCAACGGGACTGTTCCACCGG
GCCATCTCTCAGAGCGGCGTGGCGGGAGTTCCTGTCACCCAGAAAGGTGA
CCTCACACAAACGGAAATTCTCGCTCGCGAGTTGAACTGCAGCACGGCCT
CCTACGATGACATGATGAGCTGTCTGCGAGGGTTGCCGCGTGAGGAAGTC
TCAACGTTGATGGTTCAGTCCGTGGTCATCGATGGCAGGTTCCTCTTGCA
AAGTCCTTGGGACCTGATGAACCACAAGTTCATCAACAGAGTGGACTACC
TCCTGGGCACAAACAACGACGAGTTCGGGTTCTACCTGTCGTCAGAGTCC
CCTTACATCGACGCAGACGGGATGACCAGGGCTGAGTTTGAAACCTACCT
GCCGTACGATCTACAACAGGTTGCCGACCAGTACTTGTACCTGGACCCGG
GCATGGCGGACGATCCGATCTACCTGCGCGACCAGTACCTCCAACTCCTG
ATGGACGCCTGGTTCACCGCACCGACAGTCATGATGGCTAAGGCCGAGTC
AGCCCCCCGCAGTCGAGTTTACCAGTACGAGCTGCAGCACAGCGCCTCGG
TTTTCTCCTTCCGCCCGCCGTATGTAGGAGTTGACCACACCGACGACCTT
TTCCTCGTGTTCGGCATCCCTCTCCTGCGTGATGAGAAGGGTTCGTACTG
GAAGTACAGCTTCACCCAGGAGGAGAGAGACCTGAGTCTGGACATGATGG
CGTACTGGGTCAACTTCGCCACTAACGGGGACCCCAATGACTCCACAGGA
GCGGCGCGCATGCGTAACATGGTCCACTGGCCGCGTTACACTTCTTCATC
CCAATCCTACCTCCAGCTGAACGTGACGTCATCTGCTGACTTCAGGCTGC
GGGAGTCCCGGATGAAGTTTTGGAACGAGGAGGTGCCGAGGCTGCTAGGA
ATGCACGTCCACAACCACCGCGCCAGGGCTGGCTTCAACGCTGGGACTCA
CGGGGCTTCACGTAGCCTTTCTGTTCTGGCGTTTATGTTGGTTATGTCCT
ATCTGCTGGCCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00502.0-exon-Sc0000042-1570713199:1034881..1034959 | Blg00502.0-exon-Sc0000042-1570713199:1034881..1034959 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1035432..1035573 | Blg00502.0-exon-Sc0000042-1570713199:1035432..1035573 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1036165..1036369 | Blg00502.0-exon-Sc0000042-1570713199:1036165..1036369 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1036762..1036941 | Blg00502.0-exon-Sc0000042-1570713199:1036762..1036941 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1037237..1037511 | Blg00502.0-exon-Sc0000042-1570713199:1037237..1037511 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1037775..1037853 | Blg00502.0-exon-Sc0000042-1570713199:1037775..1037853 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1038453..1038629 | Blg00502.0-exon-Sc0000042-1570713199:1038453..1038629 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1039431..1039545 | Blg00502.0-exon-Sc0000042-1570713199:1039431..1039545 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1040062..1040287 | Blg00502.0-exon-Sc0000042-1570713199:1040062..1040287 | Branchiostoma lanceolatum | exon |
| Blg00502.0-exon-Sc0000042-1570713199:1040647..1040932 | Blg00502.0-exon-Sc0000042-1570713199:1040647..1040932 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1034881..1040932 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00502 |
|
