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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1737082..1744794- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00500.3 ID=Blg00500.3|Name=Blg00500.3|organism=Branchiostoma lanceolatum|type=mRNA|length=7713bp|location=Sequence derived from alignment at Sc0000042:1737082..1744794- (Branchiostoma lanceolatum)
CTCCGACCCGTGACGTCACCAGCATGCTGTAAATATTCTCAGCCGACCAG
TCTTTATCGAATATCCCCAAATATCTGTCGAATTGTACTGTAAGTATTGC
GTTTTGTAAGGTAGAAATGTTATAGAGGATTTGTTGATGGTATGTAGATG
CCAGAAAGAGGGAAAATATCTGAAAATGAGCGTTATTCCTCCTACACTAT
CCGTAGAATATTTTCTTGCTGAGTACAAAAATTGCTCTGCCATGATTGTG
ACTCAACATCTTTTTAAATCATCATCATCTACAGTACTGCTTAGTCCGCA
CGGCGGATAACTGGCAGCTGCGCGCTGACCAATGCATATTATGGAACCTT
AAAATTAACGTAACTGTTGTAAGATTAGGTATTGCCTTTGTAAATTATCA
TACCAATCTGAGAAAGGCCTCTACTTCTCTGAACTTGCACTCACCTGTTT
GTGTTTGTAATTGTATTTGTTTGGTTATCTTACATACTAGTAAATCAATG
GTCCAACATTACAGGTGTAGATGTCTACTTCAGTCCTTATTATTGTGCTG
GTATTGATATAAGTTCTACGCCCAGTGTCAGCACAGTGGCCTTTGTTATA
TTATTTGATGTCTAATTAATGTCTAAACAATATAGAAAAGGCCTCATCAC
GTAATGATATCTGGAAAGTATGCTTTGGCTGTGTGTTTTTTTCTCAAGTT
TTCATAATGTTGCTCACCTAAAGTGTGTGACAGGGACCTCATACGATACA
CCCAAATAAAGAAGGCTCATTTGTATTTTATTGTACTTATTAAGCAGTAT
GAGTGATCCATATACCGACAGAGTATACCAATGGAGGCCATATTGTAACA
GTGAGGTTCAAGCGCCACCAACTGACCAGTCTAACTGGTCCGGACCGTTT
AGCCTAGTGATTAGTGCATTGGTTTCATGGGCTGGTGGCCCGGGTTCTGC
GTGGGTTCGAATCCCGGGAGCCAGGAGATTATTCTACTCGCCTATAGTGT
TTCAATATGATACAATACATATCTTTGTTTCCACTACAGATCAGATACAG
GATGGCTGACAGTGCTACTGATAGTGGTTCCACAGGAGCAGGGGATGCTG
GGAGTGCTCCCTCTGAGCCGCAACCTGGGGTGGTGGTATGTACACCTTTT
TGTCTTTGTGAAAACGGAGGTATTGTTTTCGGTCTGTGTATTTGTCTGTC
TTGGTGTGTCTCTGGAGTTATTTAAATATTGTACGGTGAAGGGTGGAAGA
TGGGCTGGCAGGATAGGAAGGTTGGCTTGGCCTGGGTCCAAAGTTGGTCC
TGAAAGCTTTTGATGTCTACTGTTATAGTACTGATTTCGTTACTAGTACT
GATAACGATAGCGTGTCACTAGGATAACGTAAGGATAACGGTATCGTATT
GCCACGATAACGGTAATGCAACGCGATAACGCAACTTGAGTAACGTATAA
CAGACCTGTACGTTGTATTCCCCTGTGCTATGTTTGCTTTCTCTTCCTCA
GTCCTTGAGATGATTGTGTGTGGAAACATCTTGCAAAGTGTCATAACCCT
GTGTGTTAAGCAGATACGGTCTGTGGAAATCTTATAACGTTAGTCGACAA
GAAACTTTGGAAGAAACCTAGAGTCCTAGACCATGAAATCCTCAAGTTTG
ATTCTTAGAAATGCCTACAGTGCTCACAATAATGAATAAACCAAAAAAAT
TAACAAAACTCTAAACATTTCATGGAGGTATAAAATCTTCAAGTTCTAAT
TATGTCTGCCTTTGTCCCTGTGATCGTCATAGCATGTTTTAGACGATGAA
CTCTGATGAAGCCCATCCGAGTCAGTAGGCACAATGATCAATTAGAGTAA
TGATACAGTCTTTAGATAATGATAGACACCAGATCAGGGTTTTACCAATC
ATCACATATCTTTTACCTTCACTTCAACCAACTGAGGTAGTTGTTTGGCA
CCAGATTTGTATTGGTTATGGGTTAGGCAGCCGGTCCAAGATTAGATGCA
GTAATACTACTAAATAGAAGTGCAGAATATAGATCTCTATACTGTACATG
TATACTGTATATGTATAAAAACATCTAAGGTAGACTAACATCTGTACTTG
TTTGCCACAGAGTAGAAGTTCATGATAGACACCCGATCAGTATTTTTTAC
CTACAGTATCTTTAGATTATGTGTGTTGAACCAAAAGGCAATTACAATGT
ATATAGACCAATACAGATATTAATTCCTTTATTGCAGAACTACATGATGG
CCCATAAGGTGGACGCTGCCCTGTGGCTGAGTCGAGTCTTCACTGTGGGC
TGCTCCCTCCTGTATGCTATACCGTTGTTAGGGTGAGTATCTGTTTTTGA
ATCAGTGTTTAAAAAGTTGTACCAAGGTGGTTAAAGTCTCTTGGTTGTAC
ATGCTCTTTTACTTTTTAGCAAATGGATTTTGTTTATAGCAAACTGCTCA
TGAATATTGATAACTAAAGTGGTGTTTTTTCATGGCTTGCTTACAGTACT
CAACTAGTACGGGGCGACTCACTCAATGAAAATGATATTCCAGGGTTGAG
GATCTGTAAAATGTTGCCTCCGTCTCTCTTCTGCAGTATACACTCTTGGC
CTCCTTGGTCAAACCTGATAAGACCTTACCTATGTGGACAGCTGGTCACC
ATAGACAGACTTGATGTTAATGGGTAAAATTATCTACTAGTACATGTACA
GGTATAGGACCACCAAAAGTGTTCCCTTGTTCAGGTTTGGCTGTACTTGT
TGCCTATAGCTGTCATCACAGTGTTTAGCAGCTGCACCAGAGACTGTTGT
TACATCATTCGTTAAACTCTTGTTTTCCTTCCTACAGTATCCATGTTGCT
TACGGCTGCTACCAGCGTGCCCTGATCAGTAGCGCCATCACGAGCGTCCT
GCGCCTGCACCAGAGACTGCCCCGCCCCCAGCTGACCCGGGAGTTCTTCG
CCCAACTGGTCCTGGAGGACAGTGCCCACTACCTCTTCTTTGCTCTCATC
TTCGTCAACTCATTCCCCTTCACAAGTATCCTTTACCAAAGGTCCTGGGT
TTGAATCCCCTGACAAATGCCACCAATGTGGCATCATGTGGCGCTAACCA
CTGATATGTCACTGACTTTACATGACTTTCCTCACCCCACCCAGGTGTAA
AATTGGGAACCTGACTTTGGTTGGAGAGGTAAAAGGCTCCGCCTTCCTAG
TCACAGTGGATAACATCCCACTGCCCCTACAGCCTCAAAAAGGCTATGGG
ACTTCCTTTACCTTTAACTATATTCTATTCAAATATGTCCAAAATATATC
TTTTTAAGAGATATACTTAAATTTTTCATAAAATCATTCATGTTGATAAC
TCTACATTTAATCTGAACTGATTAGTGAAGCACTAATGACAGAATTATGG
TTGAAGAACAGAAATATATCATATTCATAATCATCTAGCACTTATGCCAA
AATGTACATACATATATTTCTCCTTAACCATATGTCCAGTGATTCTCATG
CCTGTGTTCATGTTCGCCCTGCTCCATGCCACAGCCTTCACCAAGACGTT
ACTTAATGTGAGTCGTGTTCCTCTGTGTGACACAAATTCTCTCTGTAAAG
GGATCTACAATCATGTACATGTATATGTGGCCCCTCCGCACATCAGTGAA
AGGGCTGTTAGCTAGAAATATTATTTAGTCAGGCTACTGTTTCTCTGAAC
AGTTGCAATGGCCAAGTGAATCGAGTGTTTGCCTTGCATTTGGTATGTCA
TGGGTTTGATCCTCAGTGTTACACCAAAGACTTCAAAAATGTTACATACT
GCTTTCTCTGCTTATTCTAGTACTTAGCATTTGGGACAGAGTATGGTATA
ATCATATGGTAGTTAAACACACACTACCGGCAGTGGACTAGCCCCCTGCT
GTAGTGATTGCACAAAGTTGTGTGGCCCAAGGGCTACTGAAAAGGAGTTG
GGTACCGCCCTATGCACCACTGGTATTAGAAGGACTTTAACTGTATCTCT
GAGTCCAAAGCTGCAATAACATCCAATTTTGAAACCTTAGAACCTAAGAT
AATTATAATTATGGGCTGAAAATGTTCTGCTGTAAACCTCTGATCCAAAA
TTTTCTATTCTTATTTTCCATGTTTTATAAGCATGTGCTACAAGTACACT
GTAGTTAATATATAAAGTGTTTTGTTCTTCCATGAACAGATCTATGGTCC
AAATGCTGGACAGTTTCTACGCTCCTTACTCGACAAGCTGGTTGCTAGGC
AGCAGGACATCCTGCGCCTGATCGCCTGCACCGAGATATTCCTGATGCCA
GCAGTGGTGTTCATGGTGTTCGGGTGAGTTACTGTCCTCTTGGTCAGGAC
ACTTGTTTGTTTGTTTTATGTAACTGATAAACACACCATTGTACAAGCTG
TATAATACTGGGCTGTAAGGTCTGATCCACAAATACCAGGATGGACTCTT
TTCAATAAGGGTGGTGGGATTTTGAACCTACTTGAGGCCAAACATAGGTA
CTCAACCTAGGAGTCAAACAGCCTGCAGAATCTCTGTAGAAGCACAGATT
AGAAAACTGTCAAGTCACATAGTTAAGCCACCTACATGTAGGGCACTCTG
AACCTGGTCTATAAAAGCTAGGACACATTGTACTTGTGCTCATTTGAGCC
CTTACCATTGGGAACACACAAGGCGAAACTAGTCTGGGTGTTGGCTTGAA
TAAAGTTCTAAACGGGAACTGTGCAGCTACAGCCTCTTTTCTGAAGATGT
TGTTTGAGCGTGTACGGTTGACTGGAGGTTATCCATTACTATTGCCATTC
ATTCCCGGATTCGTATCCTTCATAAACGCGGAAGTCTCACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACTT
ACTCACTCTCTGGTTTATCATCTGTTGTTCCCCGTGGTGCGGGGGTTAGA
CTTGCTTGCACAAGTATGCGGGGGCTGGATGGCAGCTTGCCTTGTCTGCT
GGGTTGGCTCGTAGTAAGACTGTGGTTACTAAATGTTTCCCATTCCCCAC
CCAGAGGCCGCATGAGTCTGCTGGTGCCGTTTATCTACTACCGATTCCTG
ACCCTGCGGTACGCCTCCAGGAGAAACCCCTACTCAAGGTAAACAGACTC
TTACATCAAACTTTATCTTAAGGCCACAATTTATCTACTGATTATGAAGT
GGCGTCCAATGACTGAATGACAAGGCAAACAGACACAAGATTGAGATGTC
CCTGGGTTCCATTCCTGGCTAGACGTTGTGTCCTTGGGAAAGACACTTTA
CTCAACATTCCCCATTCCACCTTCGTGTAAAAAATTTTACCTGACTTTGG
TTGGGGAGGGAAAAGGCGGTTTGAAGGGGGGTGGGTTCTGCCCCAGACAC
CATGGATAACCCACTGCCCCTACATCCTTAAAAAGGCTATGATACTACCT
TTACCTTACCTTAAAGTTTGTCTTTACTATGTCTTTACTATGTCTTAGTT
TTGGCTTTTCCTCTTTGTCCCCCTGCAGACAGCTGTTCTATGAGCTGCGT
GTGATGATGGAGCAGCTGTGCTCCCGCCCCAGCTGCCCCGTCTTCATCCG
CAACATGTGCACCAAGGCCATCGGCATCATCTCACGCCTGGCTCCACCCG
TAACACAGTGACACAGCTTCACATGTCTTTTCTCTAGCATGGAAGATCAT
ATATGTTGGTTTCTATCATTGTTTCAAAACAAATTCAACCTACATGTGAA
TTTCCAACAGAACACAACACAACACAACACAATAAATGATGAATTCACCC
TATTCTGTTCATCCGCAACATGTGCAACAAGGCCATCGGCATCATCTCAC
GCCTTGTCGTGAGTGACAAGTTGCACAGTTACACAACTTCACATTGTCTA
CATATTTGTCCTTACTATTGCATGAAAGATGATGTCTATGTTAAAAACAA
ATTCAAGCTACGTGTTTTCAACACAAAACATGAAAACCATGTGTTGGTTT
TATCATCAAAACAAATTCAACATACGTCGATGATTCCACCACATTCTGTT
AATCTTCAACATGTGCCACAAGGCACTGCCTGTCCCAGCGTCACAAGAAT
GTACTCATCATCATCAACTGGTCTCTGCATCTGTACCACCTGCATCCTAA
TACAAGATTTTAGATTACCATGTCTGTTGGTGTATACCATTGAAACAAAT
CCAAAAGATAGATCCACCAAAGTCTGCTCATCTGCTGTGCTGCAAGGCCC
ATGCATGGTCTTCTGCTTGACTCTGCTTGTAGCACAGTGACTAGTACTGT
CTGCATCCTAACACTTGTATGAAAGCTCACATATAATGATGTTTATCATT
GAAACAAATGTGTGCCTACATTCATGTAACTTGTTACAAGTCCTTACATA
TGCTGCAAGTTTGTGAAAAATGAAAAGGAGAAATTAGATATTGATAAGAG
CACATTCACCAGTCGAAAGTGACCACTTGTCAGCATTTAATCTTACTTTG
ACCAATGAGGTCTGAACCTCCTTGCTTTTACATACATGTGCAGTACATAC
ATGTGGATGGGACATATATCATAATACATTTTATGTCCGAAGGTAAATAT
TTTTGTTGGTACAACTAAACAGTCCTCATACATACTGTACGAAAATGTAA
CACAAACATATCATTTAGTAATCAAAATATGTCATGCACTGTCACTAAAA
ATACCTTCATCAATTGTGTACAGGAGTCTTATGATGAGCTGTTATAGGAC
TGAAATATACTCTGTACAAAGTATGTTAGAAGAATTTATGAGAAGCTCTG
TCCAACATACATGGTAAAAATCACAGATTGACAATATAAGATTGGTATGT
ATGAACAGCAGTGTTGTAGAGGAAGAAAATTTAAAGTAAGTACTGTTCGA
ATATGCATATTAAGCAACTCTTTTGTGGTTTTCAGTCCTTCCAATAATGT
TGATGTAATGGTTCAAGAACTGAGTATTGTTAGTGTCATAGTCTGGACAA
CATATTTATTTATACTCAATTGCATGTTGTAATCACATGTATAGTACCCG
ACTTACTCTGGTACCTGTACCTACTCTACTGTATTGTGATATGTACTAGT
GTTGTGTAGATCATAGAATTTGGAAGGGGGCATACAGAAAATGTGTATCA
AATTACTGATTGAAAAGTGTAGTTGTCAAAAGTTAAGCCCTGAATGAAAA
CACTGCCCACCTTAGACTTTGGAGGACACCTTGAAAAGCGCTTTCTAAAT
TGAAAAATCAGACTGTGTTAAAGTCGAATATATTTCTCACCGAAATCTAT
TACAGACAAGAATCATAATACAGGAGGTAGCAGTATGCTGTTTCAGTTAA
CATATAAAACTTCATTTTTCATTGAGCAACAGTTGAACTACATTTGGCTT
TAAGTAAATCTGATTTTCGAAATTTTCAGTCTTAGTGTTTTCCAATCTAA
AGTGGCCCATCCTTTGCAATTATTTTCTCAATTGGCACCTTTTTTATACC
TGTATTGTGGAGTTTGTGTAATGCAATTAAGTTGTAGTAACAGATTTGCG
TGGTACTTTGTACTGATGGTTTTGAATGTGAAGCGAAGCCTTGCCTTGTG
AACTATATTTATTCATGGTGTCAAAGTACATGTAAGTAGATTTAGTACTG
TAACTGCTTACAAAATATTGTTGAATTTCATGTTGAAAAATGTTTCAGAA
TTTCAAATAAATT Coding sequence (CDS) from alignment at Sc0000042:1737082..1744794- >Blg00500.3 ID=Blg00500.3|Name=Blg00500.3|organism=Branchiostoma lanceolatum|type=CDS|length=1200bp|location=Sequence derived from alignment at Sc0000042:1737082..1744794- (Branchiostoma lanceolatum)
ATGGCTGACAGTGCTACTGATAGTGGTTCCACAGGAGCAGGGGATGCTGG
GAGTGCTCCCTCTGAGCCGCAACCTGGGGTGGTGAACTACATGATGGCCC
ATAAGGTGGACGCTGCCCTGTGGCTGAGTCGAGTCTTCACTGTGGGCTGC
TCCCTCCTGTATGCTATACCGTTGTTAGGTATCCATGTTGCTTACGGCTG
CTACCAGCGTGCCCTGATCAGTAGCGCCATCACGAGCGTCCTGCGCCTGC
ACCAGAGACTGCCCCGCCCCCAGCTGACCCGGGAGTTCTTCGCCCAACTG
GTCCTGGAGGACAGTGCCCACTACCTCTTCTTTGCTCTCATCTTCGTCAA
CTCATTCCCCTTCACAATGATTCTCATGCCTGTGTTCATGTTCGCCCTGC
TCCATGCCACAGCCTTCACCAAGACGTTACTTAATATCTATGGTCCAAAT
GCTGGACAGTTTCTACGCTCCTTACTCGACAAGCTGGTTGCTAGGCAGCA
GGACATCCTGCGCCTGATCGCCTGCACCGAGATATTCCTGATGCCAGCAG
TGGTGTTCATGGTGTTCGGAGGCCGCATGAGTCTGCTGGTGCCGTTTATC
TACTACCGATTCCTGACCCTGCGGTACGCCTCCAGGAGAAACCCCTACTC
AAGACAGCTGTTCTATGAGCTGCGTGTGATGATGGAGCAGCTGTGCTCCC
GCCCCAGCTGCCCCGTCTTCATCCGCAACATGTGCAACAAGGCCATCGGC
ATCATCTCACGCCTTGTCGTGAGTGACAAGTTGCACAGTTACACAACTTC
ACATTGTCTACATATTTGTCCTTACTATTGCATGAAAGATGATGTCTATG
TTAAAAACAAATTCAAGCTACGTGTTTTCAACACAAAACATGAAAACCAT
GTGTTGGTTTTATCATCAAAACAAATTCAACATACGTCGATGATTCCACC
ACATTCTGTTAATCTTCAACATGTGCCACAAGGCACTGCCTGTCCCAGCG
TCACAAGAATGTACTCATCATCATCAACTGGTCTCTGCATCTGTACCACC
TGCATCCTAATACAAGATTTTAGATTACCATGTCTGTTGGTGTATACCAT
TGAAACAAATCCAAAAGATAGATCCACCAAAGTCTGCTCATCTGCTGTGC
TGCAAGGCCCATGCATGGTCTTCTGCTTGACTCTGCTTGTAGCACAGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00500.3-exon-Sc0000042-1570713199:1744706..1744794 | Blg00500.3-exon-Sc0000042-1570713199:1744706..1744794 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1743660..1743755 | Blg00500.3-exon-Sc0000042-1570713199:1743660..1743755 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1742463..1742557 | Blg00500.3-exon-Sc0000042-1570713199:1742463..1742557 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1741770..1741957 | Blg00500.3-exon-Sc0000042-1570713199:1741770..1741957 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1741238..1741305 | Blg00500.3-exon-Sc0000042-1570713199:1741238..1741305 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1740472..1740605 | Blg00500.3-exon-Sc0000042-1570713199:1740472..1740605 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1739657..1739740 | Blg00500.3-exon-Sc0000042-1570713199:1739657..1739740 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1739191..1739266 | Blg00500.3-exon-Sc0000042-1570713199:1739191..1739266 | Branchiostoma lanceolatum | exon |
| Blg00500.3-exon-Sc0000042-1570713199:1737082..1738975 | Blg00500.3-exon-Sc0000042-1570713199:1737082..1738975 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1737082..1744794 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00500 |
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