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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1815725..1823203- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00498.5 ID=Blg00498.5|Name=Blg00498.5|organism=Branchiostoma lanceolatum|type=mRNA|length=7479bp|location=Sequence derived from alignment at Sc0000042:1815725..1823203- (Branchiostoma lanceolatum)
GCGTGCGTGGGTGACTTTGAACTTCCGGCATTGGGCAAGAGACTCGAAAA
CCCCCGACCCGTACCTACCGTAACAGCACTGTCATCTCTTCTGTAGGTTC
TACTGGGTACGTACAAGGGTTAAACATCTTTTACTGTTTCATCATGAAAC
TGTACGCAGTTAGATCCAGACATTATCAAGCTGAGTGACAGGTGTAGTAA
ATAGGCATTGACAGCGGTTGCCAACTATTCAAATTTCAACGGTGCGGTTG
GGTTCATATTCGCTGTCAAAACATCACCATAAATTAGAACACAGCTTGTA
CTTTTTTTATGATTGAGACCTAAGTATCAAATTATCAAAAGGCAATGATG
TTGTTGGCTTAGAGACGGAAACATGGACGCATTTTCAAAGTCTTGGGTTT
ACATAAGGCACATACATGACCCGACCGACAAAATGGTGGCAGTTTCGCCT
TATTTAAACAAGACTAAGAGAAAATAGGTGGTTCCTTTCTTGCCAGCATT
TCAAAATAGCGGTATGCTGGTTATCATGTTTACTTCGCGGAAGAGAAACA
TGATATTGTGTTGTCTACGTTTCTTCTTCTTCTCCGAACAAATAAGGTCA
AGGACATGGACCAGACGGCTGTCACCATGGTTACTGATAAAGTAGCAGAC
ACCCTGTGGTGTTTGATTACATTACTAGTATGTTACTAGTATGTAACAAT
CGGCATGACAGAGCTTGAGGGGCTTATAATTATATATAATGAATGCATTT
GAGTAAGAATAAACAGAGCAGTAGTTTGTTAGGCTAGACCATATGTATTT
GCTGGCAAAAGTCCATATTTACTTTACGTCTCGTTCGCGTAGATCCAATT
CCGACTACCGACACTCAACGACATGTCCGACCTGTGGGCGCGGATCCTGG
CCCAAAAGGCGCCCCTACTGCGCGACCTGGAGCCCAGACACATGCTGAAC
GACCTGCTGCAACATGGCGTTCTGGACGACGACGAACATGAGAGGGTGAA
AAGGGCAGGCGTCACAAGGTGAGATTTAAAGAGTTTTCCACACTCCCTTT
GGCTAAAAGACAAGTATTATGAAAACTATGAGTAAAACAAAAATGCATCC
GCTTCTTATGTCTTTGTTGTCTCACCTAAGAAAATTGTTTAAAGACATCT
GGATAAGGAGGGTCACGGTTTGAATCGCGCATGCTTTCTAAGTGACAGAA
TGGCATGCTTATAATTTATAAACGAACATGAGAGGGTGAAAAGGGCAAGC
GTCACCAGGCATGATAAAAAGAATTTTTGACACTTCCTGTATTTCTTTTT
TTGGGCTAGAAGACAAAAATTATGGAAACTAAAGTACAAGTACAAAAGTT
GTTATCTAACCGTTGCTTGTTATTCAACCTCTGAAAATGGCTTAGAGACA
GAGGTTTACGGTTTCATTTCATTTTTTCATTTTATTTATTTTACCAGGGA
AAATCACAACTCAGGCCTGTGGCCTGTTTTTCAGGTGTCCCTGGACACAT
AAATATACAATACACGTAAGCAAGAACATAGTATTACACATATTACATTA
TAAAGCTAAAAACATCAATTTCGTTCAAGTAAGAGCAGAAATATCTAACT
ACAGTCCATTTTTGAAGGCCGTCAACCCGGTTAATCGTCTTTGATCATCA
GAGAGTCTATTCCATAGTGTTGGCCCCTCGTACTGTAAACTGCCCAACTG
CCCGTAGTTTGAACTACGCTTACTATCTAAGAGGCAGATTGGCATGCAAG
AAACGTATATCATATAATTGACATGTTATGCTACACTGTAAACGTGTCTC
GTTACTAGTGTGAAGTTACAACCGCCATTACATGAAAATGTCAACCTCTT
GGGCCAGGGAAATGTTGTTACTTCCCCCGATTTATCATCACCATCCGATA
TTTCTGATAGAAAAGACAGGACGGAAGCCCTGCTGGACATTCTGAAGGGG
AAAGAAGTAGAGGAGTTAGCGGCCTTCATGCTACAATTGGAGAGACTTTC
TCCCCACCTGGCAGAACAGATTCGAACTGCAGAAAAGGAGAAAGTGGAAA
AAGGTAACAACCTTCATCACATTGCACTTTGAACTCTCAACTACCTATAT
GTAACAGCCATTGGATAGTTTGGGCCACCATGGTTTTCTGCTGCATGCTA
CCTTTCTAACGTAGTGGTTATCCTATTCCTACGTTTGTCTGAAATTTTGC
AGTTATATATATGTTATTTTCAGTAATTCCGACACCAAGAAACTGCCGTG
TACAGTCGTCCACCCGGGATTCCCTGACGGTTGCCTGGGACCAGCTAGAG
GCCGTCCCAGGAGGGTCGGTGGAAGTCGCCATCTTCGCACACGACGACGA
CCGGGAGCCTGTGCAGCGGCGGGAGGTCGGTTGCGATCAGACTGACGTCA
GGATGGAAGGGCTGAGGGCTGGGACAAAGTACAACGCCCAGGTTCGAGTC
GTCAGTGGGGAGCTACACGGACCACAGGTGGTAGTCCAGGCAACGACTGG
TGAGAGTTTGTAATTCTACTGATATTTTTACATAGAAATGTGTATGTGTG
TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGGAACAG
GTTTCTTCCATCAACTGCCATGCCAAGAGAGGCATGGCTCTGCTTACTGG
AAACCTTTGTCCATTAAATCTGAATGCAAAACCATCTGCTGTTTAATACT
CTAAAACATTTCTTTCTCTTCCAGCAACCATCTGGTCATCAGTTCCCCTG
AAGCATGTCATGGCTGCCGTGGTTGTTGCTGTTGTTGCTGTCCTCGCTAT
GCTGCTGATGGTGTGGACGACATCAACAGGTGAGAGTGACAACATCTGTG
TTTCATGTACTTATTTATCTGGTCTGAACACGTGTCAGAGCAGAAAACGA
CCTTCCACCAAAGTATATGAGAGGGATCACAGACGTCAATAACGTGTATG
ACAGAAGGTGGTGTCACCATGGTGGTCATGACTTTACCTGTCTTTATCTA
AATATACAATGAGAAAAATTGCGTCTTTTTTCAGGTGAAAGATGCCTCTA
CCCCAAATACATCTTGGACACCACAACAAAGAGCAGACCCCATCTATTTG
GTAGGGGGGAAGATATCGTTAACCTAACTGCAATCATAGAAAACGAGAGC
ATATGTTTGGTAAGTGGTCTCAGTGGTATAGGGAAAACAGCAATGGTGAA
AGAATATCTGTATAGAAAGAGCATCGAATACACAGCTGGCATTGTGTGGA
TAACTTCCTACGAACAAATCAACTTTCTATTTGTTGATGTGTTGCGGGAA
GTAACAGGTCGAGATCCTATTGAGTATGACTACCGGGATAAAAGTTTCGA
CTGGACCACCGAGTACTTGAGCAAAAAGCTACTTGTGAGGTTCAAGGGAA
AGTTTCTCTTCGTTTTCGACAATGTAGAGACTTCGCAGCATGCCTCTGAC
ATGTTGAAGATTGTGCCAGACAAGTCGGTGCATGGCGTAACCTCTCACGT
AGTCTTACTGTCCAGGAGAGAGCTTTCTCTTCCTCACTTAAAAGAGCTCC
CAATCTTGGCGTTACACCATCTCTCACCTGAAGCTGCCGTACAGCTTTAT
CGTTCACTGAACAAGTCTGATGTGGGTTCGGCACAGGTAAATGGTGTGCG
TCAGGGTGTTTGTGACTACAATTGCAGTGTTCACATAATTGTAGATGGTC
TCGGCTACATTCCGCATGCAATAATCCACTACTACAAGGAATCAGAAGTC
ATGCATATAAAACATGGTAAACCTTATACAGCCCATATGAGTGCTGACCT
GCTACAAGTCAGTCTTCTGCCTGTTCGACTAGATTTGACCGGCTACGGAC
AGAGTGAAAATCCAATTGTTGACGAAGTCAAAATGGTACAGAAAGAATGT
TCAAAAGCTTATGAACTCCTGGTGGTTCTTTCGTTTTTTGATCACAGTTT
AAAGGTGCCTTATTATGTCCTGAAAGGTTCTAGAGCAGACTGGGAGCACC
CCATGTTCAAAGGAGAATCTTATTACGAGATGTTCGAATGCTTAAAGAAG
CATTCGTTGATCAGATTTAACAAAATACCATGTGAGGTTGCCATGAATTG
GATTGTGATTTATTCTGCCGTGTATACGCTAGACAATGTGGAGTCAGAAG
GTCGCTACTTGTGGACAGCCTTAGAGATGGCTGTGCGTGCAGCGGAGAGG
GTGCGACAACTATCTTTAACATGCCAAACAAGAGTCTTAGGACCCAAAAT
CTCCATGAAACGTTGTTTTTCTATTAAACCAGTTCCCCCCATTCTATATC
GCTCAATGGTATGACCCACACTGCAAGGGGAGAAGTCTGACCTACTTTTC
TATAAATAGCTACTGACAGATGGCGTGCCACATGACAACACTGCAGATAT
AGATTTTCCTTATTACTTATGCAAATTAAGTCCAATTTGCATAATTTGCA
GTTCATTGTATACATCTCTGCTTAGGCTACCTGCATAGTAAATAACACGA
AAATCTGTCGCTCCTTTCTTCAGTTATTCTCCTTTGAAGATTTTGACAAA
TACGCCATTAGAGTTCCAGTGACACATACCAGGGGGCCCAAAATCGACCT
TGACCTTTCTCCTCCCGACACCTACCCACATACCAAATATCATTACAATT
CATCCACACGTTCTATAGTTATGCTGATTTTAAGCATCCGGTGACACATA
CATACACACACGGTGACACAAACATACACACACGTGCACACACACGCAAA
CACACTAACTTTGCATGATTTGCACTTCAGTGTGTACATCTCTGTCCAAC
CTACCTGCGTACCAAATAACATGGAAATCTGTTGTTCCTTTCTTCAGTTA
TACCCCTTTAGAACATTTTTACAAATAGGCCATTGTAGTTCCAGGGACAC
AAACCAGGGGGCCCAAAATCGACCTTGACCATTCTCCTCCCAGCGCATAC
CCACATACCAAATATCATTACAATCCATCTACACGTTCTACAGTTATGCT
GACTTTAAGCATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAACGAT
TTACCTCCTTACTTATGCAAATTTGGTCTCATTTGCATAGTTTGCACTTA
AGTGTGTACATCTTGGTCTAACCTACCTGTGTACCAAATAACATGACGAT
CTGTCGATCCTCTCTTCAGTTCTTCTACATTGAAGATTTTTAAAAATACG
CAATTGCAGTTCCAATCACAAATGCCAGGGGGCCCAAAATCGACCTTGAC
CTTCCTCCTCTTAACACCCACCCACATACCAAAAATCATTACGATCCATG
TACAGGTTCTACAGTTATGGTGACTTTAAGCATCCGGTGACACAAACATA
CACACAAATACCAAACGCAAGCAAAACAGTATATCCATGAAAAAGCCTTT
TTTCATGGAGATAACTAAGACAGACTCTCCAGACTGCAAAGGTTTGACTG
AAGACAAGTTGGCAGAGATGTTCTCCCAAGCATTAGAACATTCCGACCAA
ATTGCTACCCAAACTGTTAAGAAGAAGACAGGAAGGTTTGATAGCTGTCA
CGCGGAGGCTATATCAAGAGACTTCAATTCTGATTATGGACTGGTAAATG
TATCGCTGCATAATCCTGCCTTTGATTTGTCATCCTGGCCTGTAAACACA
AACATGTCTCACAACGGCGTTGTGTACACCTGGCCAACAGAACCGTTTAG
AAACGACGACGACGACTATCTCGATCTCAAAAACTGTGTAATGGCAGCTG
ATGGTTTGTTTCATTGCTTTCCTTAGAAATGTAAGGGGATAAAAGGTAGA
TATTTTTTCAATACAATATTTGGTTGTTACCTGTATTTTTATCCCACGTG
ACCATAGCCTTGTCCTATTTTATGCATTGATGTCTCTACCATGTCATTTT
AATATATAAGTGCAAAGATTTTAAACTACGTATTTAATGGATTGAATTTA
GTGTTTATCAATCAGTTGATATATATATATATATATATGGATTATTTGTA
CTTTAACTGTTGGTGCTCGTAATATCCATGACTGTGTATGCATAGTCTAT
AAATGTGACATGCCAAATCCAATAGCAATAAAACTGGATCTGAATCTACC
CATACCAACATTACTTTCATGGCAATCAAATTGATTGCCATGAAAGTAAT
GTTAATATGTGAATCAATGTTGATATTTTTACCAAGCCATTTAAATCTTA
CAAAAATCATGTGTGAACATCCATGGCAAGAGCCAAATCATTTAGTTTAA
ATGCAGAACCAACCGGAGTCAACAAGTGTACTTAATCTTTCATAGCCAGC
CTTTTGAATAACAACTGGTTTTATCCATATTGTATCAACTGGATTGCAAC
TGATTGTATCAATATTGTCATGATCATTAAAGTTACATCTTACCTTTGAA
TGTGGGAATCAGTTGATTTTTATAGTTATATCTAAGTTGATGTTTATCGT
TTTAAACTCTGTTCTAAAATCATATCTTTTTAGCTGACAATAGCTGATAA
AATCTAGTGGAAACTAATAAACGTAATTAATTTGAATCAAAGATCTAATA
GATCGTATAGGTAATTAAGCATGGGCATCGTAAAAGTAAGCTGTTTGTGC
AATACGTTTTGTCTTTCGTGTTGTGCTCTGAAGTTCTGGTGAATATGCAG
TAAAATTCCTGACCGAAATGACTTGTACTTTCTAACTTCTTCTATGTCAA
TTGATGAGTACCGTAATCGTTTTACTCATAAGAGTTTGGGCTGCAGACCG
TAGCAAATTCGCCCTTTTGGACAATTTAC Coding sequence (CDS) from alignment at Sc0000042:1815725..1823203- >Blg00498.5 ID=Blg00498.5|Name=Blg00498.5|organism=Branchiostoma lanceolatum|type=CDS|length=1758bp|location=Sequence derived from alignment at Sc0000042:1815725..1823203- (Branchiostoma lanceolatum)
ATGGAAGGGCTGAGGGCTGGGACAAAGTACAACGCCCAGGTTCGAGTCGT
CAGTGGGGAGCTACACGGACCACAGGTGGTAGTCCAGGCAACGACTGCAA
CCATCTGGTCATCAGTTCCCCTGAAGCATGTCATGGCTGCCGTGGTTGTT
GCTGTTGTTGCTGTCCTCGCTATGCTGCTGATGGTGTGGACGACATCAAC
AGGTGAAAGATGCCTCTACCCCAAATACATCTTGGACACCACAACAAAGA
GCAGACCCCATCTATTTGGTAGGGGGGAAGATATCGTTAACCTAACTGCA
ATCATAGAAAACGAGAGCATATGTTTGGTAAGTGGTCTCAGTGGTATAGG
GAAAACAGCAATGGTGAAAGAATATCTGTATAGAAAGAGCATCGAATACA
CAGCTGGCATTGTGTGGATAACTTCCTACGAACAAATCAACTTTCTATTT
GTTGATGTGTTGCGGGAAGTAACAGGTCGAGATCCTATTGAGTATGACTA
CCGGGATAAAAGTTTCGACTGGACCACCGAGTACTTGAGCAAAAAGCTAC
TTGTGAGGTTCAAGGGAAAGTTTCTCTTCGTTTTCGACAATGTAGAGACT
TCGCAGCATGCCTCTGACATGTTGAAGATTGTGCCAGACAAGTCGGTGCA
TGGCGTAACCTCTCACGTAGTCTTACTGTCCAGGAGAGAGCTTTCTCTTC
CTCACTTAAAAGAGCTCCCAATCTTGGCGTTACACCATCTCTCACCTGAA
GCTGCCGTACAGCTTTATCGTTCACTGAACAAGTCTGATGTGGGTTCGGC
ACAGGTAAATGGTGTGCGTCAGGGTGTTTGTGACTACAATTGCAGTGTTC
ACATAATTGTAGATGGTCTCGGCTACATTCCGCATGCAATAATCCACTAC
TACAAGGAATCAGAAGTCATGCATATAAAACATGGTAAACCTTATACAGC
CCATATGAGTGCTGACCTGCTACAAGTCAGTCTTCTGCCTGTTCGACTAG
ATTTGACCGGCTACGGACAGAGTGAAAATCCAATTGTTGACGAAGTCAAA
ATGGTACAGAAAGAATGTTCAAAAGCTTATGAACTCCTGGTGGTTCTTTC
GTTTTTTGATCACAGTTTAAAGGTGCCTTATTATGTCCTGAAAGGTTCTA
GAGCAGACTGGGAGCACCCCATGTTCAAAGGAGAATCTTATTACGAGATG
TTCGAATGCTTAAAGAAGCATTCGTTGATCAGATTTAACAAAATACCATG
TGAGGTTGCCATGAATTGGATTGTGATTTATTCTGCCGTGTATACGCTAG
ACAATGTGGAGTCAGAAGGTCGCTACTTGTGGACAGCCTTAGAGATGGCT
GTGCGTGCAGCGGAGAGGGTGCGACAACTATCTTTAACATGCCAAACAAG
AACAGACTCTCCAGACTGCAAAGGTTTGACTGAAGACAAGTTGGCAGAGA
TGTTCTCCCAAGCATTAGAACATTCCGACCAAATTGCTACCCAAACTGTT
AAGAAGAAGACAGGAAGGTTTGATAGCTGTCACGCGGAGGCTATATCAAG
AGACTTCAATTCTGATTATGGACTGGTAAATGTATCGCTGCATAATCCTG
CCTTTGATTTGTCATCCTGGCCTGTAAACACAAACATGTCTCACAACGGC
GTTGTGTACACCTGGCCAACAGAACCGTTTAGAAACGACGACGACGACTA
TCTCGATCTCAAAAACTGTGTAATGGCAGCTGATGGTTTGTTTCATTGCT
TTCCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00498.5-exon-Sc0000042-1570713199:1823098..1823203 | Blg00498.5-exon-Sc0000042-1570713199:1823098..1823203 | Branchiostoma lanceolatum | exon |
| Blg00498.5-exon-Sc0000042-1570713199:1821151..1822361 | Blg00498.5-exon-Sc0000042-1570713199:1821151..1822361 | Branchiostoma lanceolatum | exon |
| Blg00498.5-exon-Sc0000042-1570713199:1820705..1820948 | Blg00498.5-exon-Sc0000042-1570713199:1820705..1820948 | Branchiostoma lanceolatum | exon |
| Blg00498.5-exon-Sc0000042-1570713199:1820375..1820479 | Blg00498.5-exon-Sc0000042-1570713199:1820375..1820479 | Branchiostoma lanceolatum | exon |
| Blg00498.5-exon-Sc0000042-1570713199:1818971..1820169 | Blg00498.5-exon-Sc0000042-1570713199:1818971..1820169 | Branchiostoma lanceolatum | exon |
| Blg00498.5-exon-Sc0000042-1570713199:1815725..1817084 | Blg00498.5-exon-Sc0000042-1570713199:1815725..1817084 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1815725..1823203 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00498 |
|
