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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:1818194..1821954- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00498.3 ID=Blg00498.3|Name=Blg00498.3|organism=Branchiostoma lanceolatum|type=mRNA|length=3761bp|location=Sequence derived from alignment at Sc0000042:1818194..1821954- (Branchiostoma lanceolatum)
CGTCACCAGGCATGATAAAAAGAATTTTTGACACTTCCTGTATTTCTTTT
TTTGGGCTAGAAGACAAAAATTATGGAAACTAAAGTACAAGTACAAAAGT
TGTTATCTAACCGTTGCTTGTTATTCAACCTCTGAAAATGGCTTAGAGAC
AGAGGTTTACGGTTTCATTTCATTTTTTCATTTTATTTATTTTACCAGGG
AAAATCACAACTCAGGCCTGTGGCCTGTTTTTCAGGTGTCCCTGGACACA
TAAATATACAATACACGTAAGCAAGAACATAGTATTACACATATTACATT
ATAAAGCTAAAAACATCAATTTCGTTCAAGTAAGAGCAGAAATATCTAAC
TACAGTCCATTTTTGAAGGCCGTCAACCCGGTTAATCGTCTTTGATCATC
AGAGAGTCTATTCCATAGTGTTGGCCCCTCGTACTGTAAACTGCCCAACT
GCCCGTAGTTTGAACTACGCTTACTATCTAAGAGGCAGATTGGCATGCAA
GAAACGTATATCATATAATTGACATGTTATGCTACACTGTAAACGTGTCT
CGTTACTAGTGTGAAGTTACAACCGCCATTACATGAAAATGTCAACCTCT
TGGGCCAGGGAAATGTTGTTACTTCCCCCGATTTATCATCACCATCCGAT
ATTTCTGATAGAAAAGACAGGACGGAAGCCCTGCTGGACATTCTGAAGGG
GAAAGAAGTAGAGGAGTTAGCGGCCTTCATGCTACAATTGGAGAGACTTT
CTCCCCACCTGGCAGAACAGATTCGAACTGCAGAAAAGGAGAAAGTGGAA
AAAGGTAACAACCTTCATCACATTGCACTTTGAACTCTCAACTACCTATA
TGTAACAGCCATTGGATAGTTTGGGCCACCATGGTTTTCTGCTGCATGCT
ACCTTTCTAACGTAGTGGTTATCCTATTCCTACGTTTGTCTGAAATTTTG
CAGTTATATATATGTTATTTTCAGTAATTCCGACACCAAGAAACTGCCGT
GTACAGTCGTCCACCCGGGATTCCCTGACGGTTGCCTGGGACCAGCTAGA
GGCCGTCCCAGGAGGGTCGGTGGAAGTCGCCATCTTCGCACACGACGACG
ACCGGGAGCCTGTGCAGCGGCGGGAGGTCGGTTGCGATCAGACTGACGTC
AGGATGGAAGGGCTGAGGGCTGGGACAAAGTACAACGCCCAGGTTCGAGT
CGTCAGTGGGGAGCTACACGGACCACAGGTGGTAGTCCAGGCAACGACTG
GTGAGAGTTTGTAATTCTACTGATATTTTTACATAGAAATGTGTATGTGT
GTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGGAACA
GGTTTCTTCCATCAACTGCCATGCCAAGAGAGGCATGGCTCTGCTTACTG
GAAACCTTTGTCCATTAAATCTGAATGCAAAACCATCTGCTGTTTAATAC
TCTAAAACATTTCTTTCTCTTCCAGCAACCATCTGGTCATCAGTTCCCCT
GAAGCATGTCATGGCTGCCGTGGTTGTTGCTGTTGTTGCTGTCCTCGCTA
TGCTGCTGATGGTGTGGACGACATCAACAGGTGAGAGTGACAACATCTGT
GTTTCATGTACTTATTTATCTGGTCTGAACACGTGTCAGAGCAGAAAACG
ACCTTCCACCAAAGTATATGAGAGGGATCACAGACGTCAATAACGTGTAT
GACAGAAGGTGGTGTCACCATGGTGGTCATGACTTTACCTGTCTTTATCT
AAATATACAATGAGAAAAATTGCGTCTTTTTTCAGGTGAAAGATGCCTCT
ACCCCAAATACATCTTGGACACCACAACAAAGAGCAGACCCCATCTATTT
GGTAGGGGGGAAGATATCGTTAACCTAACTGCAATCATAGAAAACGAGAG
CATATGTTTGGTAAGTGGTCTCAGTGGTATAGGGAAAACAGCAATGGTGA
AAGAATATCTGTATAGAAAGAGCATCGAATACACAGCTGGCATTGTGTGG
ATAACTTCCTACGAACAAATCAACTTTCTATTTGTTGATGTGTTGCGGGA
AGTAACAGGTCGAGATCCTATTGAGTATGACTACCGGGATAAAAGTTTCG
ACTGGACCACCGAGTACTTGAGCAAAAAGCTACTTGTGAGGTTCAAGGGA
AAGTTTCTCTTCGTTTTCGACAATGTAGAGACTTCGCAGCATGCCTCTGA
CATGTTGAAGATTGTGCCAGACAAGTCGGTGCATGGCGTAACCTCTCACG
TAGTCTTACTGTCCAGGAGAGAGCTTTCTCTTCCTCACTTAAAAGAGCTC
CCAATCTTGGCGTTACACCATCTCTCACCTGAAGCTGCCGTACAGCTTTA
TCGTTCACTGAACAAGTCTGATGTGGGTTCGGCACAGGTAAATGGTGTGC
GTCAGGGTGTTTGTGACTACAATTGCAGTGTTCACATAATTGTAGATGGT
CTCGGCTACATTCCGCATGCAATAATCCACTACTACAAGGAATCAGAAGT
CATGCATATAAAACATGGTAAACCTTATACAGCCCATATGAGTGCTGACC
TGCTACAAGTCAGTCTTCTGCCTGTTCGACTAGATTTGACCGGCTACGGA
CAGAGTGAAAATCCAATTGTTGACGAAGTCAAAATGGTACAGAAAGAATG
TTCAAAAGCTTATGAACTCCTGGTGGTTCTTTCGTTTTTTGATCACAGTT
TAAAGGTGCCTTATTATGTCCTGAAAGGTTCTAGAGCAGACTGGGAGCAC
CCCATGTTCAAAGGAGAATCTTATTACGAGATGTTCGAATGCTTAAAGAA
GCATTCGTTGATCAGATTTAACAAAATACCATGTGAGGTTGCCATGAATT
GGATTGTGATTTATTCTGCCGTGTATACGCTAGACAATGTGGAGTCAGAA
GGTCGCTACTTGTGGACAGCCTTAGAGATGGCTGTGCGTGCAGCGGAGAG
GGTGCGACAACTATCTTTAACATGCCAAACAAGAGTCTTAGGACCCAAAA
TCTCCATGAAACGTTGTTTTTCTATTAAACCAGTTCCCCCCATTCTATAT
CGCTCAATGGTATGACCCACACTGCAAGGGGAGAAGTCTGACCTACTTTT
CTATAAATAGCTACTGACAGATGGCGTGCCACATGACAACACTGCAGATA
TAGATTTTCCTTATTACTTATGCAAATTAAGTCCAATTTGCATAATTTGC
AGTTCATTGTATACATCTCTGCTTAGGCTACCTGCATAGTAAATAACACG
AAAATCTGTCGCTCCTTTCTTCAGTTATTCTCCTTTGAAGATTTTGACAA
ATACGCCATTAGAGTTCCAGTGACACATACCAGGGGGCCCAAAATCGACC
TTGACCTTTCTCCTCCCGACACCTACCCACATACCAAATATCATTACAAT
TCATCCACACGTTCTATAGTTATGCTGATTTTAAGCATCCGGTGACACAT
ACATACACACACGGTGACACAAACATACACACACGTGCACACACACGCAA
ACACACTAACTTTGCATGATTTGCACTTCAGTGTGTACATCTCTGTCCAA
CCTACCTGCGTACCAAATAACATGGAAATCTGTTGTTCCTTTCTTCAGTT
ATACCCCTTTAGAACATTTTTACAAATAGGCCATTGTAGTTCCAGGGACA
CAAACCAGGGGGCCCAAAATCGACCTTGACCATTCTCCTCCCAGCGCATA
CCCACATACCAAATATCATTACAATCCATCTACACGTTCTACAGTTATGC
TGACTTTAAGC Coding sequence (CDS) from alignment at Sc0000042:1818194..1821954- >Blg00498.3 ID=Blg00498.3|Name=Blg00498.3|organism=Branchiostoma lanceolatum|type=CDS|length=1482bp|location=Sequence derived from alignment at Sc0000042:1818194..1821954- (Branchiostoma lanceolatum)
ATGGAAGGGCTGAGGGCTGGGACAAAGTACAACGCCCAGGTTCGAGTCGT
CAGTGGGGAGCTACACGGACCACAGGTGGTAGTCCAGGCAACGACTGCAA
CCATCTGGTCATCAGTTCCCCTGAAGCATGTCATGGCTGCCGTGGTTGTT
GCTGTTGTTGCTGTCCTCGCTATGCTGCTGATGGTGTGGACGACATCAAC
AGGTGAAAGATGCCTCTACCCCAAATACATCTTGGACACCACAACAAAGA
GCAGACCCCATCTATTTGGTAGGGGGGAAGATATCGTTAACCTAACTGCA
ATCATAGAAAACGAGAGCATATGTTTGGTAAGTGGTCTCAGTGGTATAGG
GAAAACAGCAATGGTGAAAGAATATCTGTATAGAAAGAGCATCGAATACA
CAGCTGGCATTGTGTGGATAACTTCCTACGAACAAATCAACTTTCTATTT
GTTGATGTGTTGCGGGAAGTAACAGGTCGAGATCCTATTGAGTATGACTA
CCGGGATAAAAGTTTCGACTGGACCACCGAGTACTTGAGCAAAAAGCTAC
TTGTGAGGTTCAAGGGAAAGTTTCTCTTCGTTTTCGACAATGTAGAGACT
TCGCAGCATGCCTCTGACATGTTGAAGATTGTGCCAGACAAGTCGGTGCA
TGGCGTAACCTCTCACGTAGTCTTACTGTCCAGGAGAGAGCTTTCTCTTC
CTCACTTAAAAGAGCTCCCAATCTTGGCGTTACACCATCTCTCACCTGAA
GCTGCCGTACAGCTTTATCGTTCACTGAACAAGTCTGATGTGGGTTCGGC
ACAGGTAAATGGTGTGCGTCAGGGTGTTTGTGACTACAATTGCAGTGTTC
ACATAATTGTAGATGGTCTCGGCTACATTCCGCATGCAATAATCCACTAC
TACAAGGAATCAGAAGTCATGCATATAAAACATGGTAAACCTTATACAGC
CCATATGAGTGCTGACCTGCTACAAGTCAGTCTTCTGCCTGTTCGACTAG
ATTTGACCGGCTACGGACAGAGTGAAAATCCAATTGTTGACGAAGTCAAA
ATGGTACAGAAAGAATGTTCAAAAGCTTATGAACTCCTGGTGGTTCTTTC
GTTTTTTGATCACAGTTTAAAGGTGCCTTATTATGTCCTGAAAGGTTCTA
GAGCAGACTGGGAGCACCCCATGTTCAAAGGAGAATCTTATTACGAGATG
TTCGAATGCTTAAAGAAGCATTCGTTGATCAGATTTAACAAAATACCATG
TGAGGTTGCCATGAATTGGATTGTGATTTATTCTGCCGTGTATACGCTAG
ACAATGTGGAGTCAGAAGGTCGCTACTTGTGGACAGCCTTAGAGATGGCT
GTGCGTGCAGCGGAGAGGGTGCGACAACTATCTTTAACATGCCAAACAAG
AGTCTTAGGACCCAAAATCTCCATGAAACGTTGTTTTTCTATTAAACCAG
TTCCCCCCATTCTATATCGCTCAATGGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00498.3-exon-Sc0000042-1570713199:1821946..1821954 | Blg00498.3-exon-Sc0000042-1570713199:1821946..1821954 | Branchiostoma lanceolatum | exon |
| Blg00498.3-exon-Sc0000042-1570713199:1821151..1821293 | Blg00498.3-exon-Sc0000042-1570713199:1821151..1821293 | Branchiostoma lanceolatum | exon |
| Blg00498.3-exon-Sc0000042-1570713199:1820705..1820948 | Blg00498.3-exon-Sc0000042-1570713199:1820705..1820948 | Branchiostoma lanceolatum | exon |
| Blg00498.3-exon-Sc0000042-1570713199:1820375..1820479 | Blg00498.3-exon-Sc0000042-1570713199:1820375..1820479 | Branchiostoma lanceolatum | exon |
| Blg00498.3-exon-Sc0000042-1570713199:1818194..1820169 | Blg00498.3-exon-Sc0000042-1570713199:1818194..1820169 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:1818194..1821954 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00498 |
|
