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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:637724..646629+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00490.0 ID=Blg00490.0|Name=Blg00490.0|organism=Branchiostoma lanceolatum|type=mRNA|length=8906bp|location=Sequence derived from alignment at Sc0000042:637724..646629+ (Branchiostoma lanceolatum)
ATCACAGTAGCGTTTAGTGGTCGAATTTGGTCATACATTACTCCAGGTGA
GTAGCACATTACTACGGATATAAGACGGTAGGTAAGTAAGATTTCCGTCA
TCTCGTGATGCGGTTATATCATTAACATCCTTATATCATCACCGCTTAGA
GCTTTTAACCGCTTAGAACTTTTCATCTCGGAAAAGCCTCGTCACGATGT
CGATGACCATGCCTGGACTTTTAATGAAACTCTTGCTAGCTTTTGTCCGC
TTCCAACACGGTCGATAACCAGCTACCAGCCACGAAATGGTCACACCTCC
TGTCTGTAGTAACTAACGTCAATACAATCCTAAAAGGCAAGGTTTAGTAG
CAGCATTGTCTCCGTCTGATTCCACAGCACGATTCAACTGACCCTAACGC
TACACACCTTATTTGTTTAGTGGATGCTTGTGTCGGTGTGTTTATCCGTT
ACCTCCGTGGTACTCTACAATACAATTAGAGGTTCGGCTAGGCTCTGGCT
GTTTTTGAAGTAAATTTAGGCGTTTGGCTTGGCGACATGAAAAAAGGAAC
AAAATAGAGAACCAGACAAAAACGCCTAAAATCAGGTCAAAAACAGCCGG
AGCCGAACCTCTGCTTGGAGAGTATCTCCGTGGGAATACACAGGGCAGAG
TGGGTAGGTGGTAGTGTAAGCTTTAGATTTTATCCTGGGCTATCTGATTT
CTTTCCTACATCGTTTACAGAAAGGAAACTGAACGGTGCCTGCTGTTCTG
TGTTATTCCTACAGATTACCATGAGCCTCCGCAGGTTTTTGTGGACCCAC
CAGGGAGTTTCTCTCCTTCGTGACGTCACCAAGGAGACTCTGGATGTTCT
GCCGAGTTTCCAGATCCGAGATGACGACGTTGTTGTGGCGAGTTATCCAA
AAACAGGTACGGGGTGGATCCGGTTTGTGATCAACACTGTGCGCGGTGTT
TTCGCAGGGTTCCTTTGCACAACCAGACCCGTGACGTAACTTGAAACTCC
CTCAGTTTGTTTGAAATTAACAGTACTTCGATTCTTATGTACATGGAGTT
ATGCTTAAGCTTCGGCTCAGATTAAAACACACACTGTTGTATCTAAAGCA
GACAATTTAACCAATCTTGCCCAGGAACACACTGGCTAATGGAGATCGTC
GTCAAAATCCTGCGAGCCGCAGGAAAAACAGAAGAAAGCTCGGACACCAT
GAATGTTGGTCCCATGGAGATGAAGCTAGCGACAGCCACACAGCCCGGCT
ACATGAAGCTGGCAGAGCTGCCCTCCCCTCGCCTTGTGGCAACACACCTG
CCCATTCAGTTTGCACCAAAAGGGATATCCAAGCCGCAGAATAAGGTATA
TATCAATGCCAAGTTACATATCAATGCAGTAACGTAATTATGAAAATGTC
AATGCCCCCCCCCCCCAACAAACGAACGCTGTGCAAAACATAACCTTCTC
GGAATAAAAGCTTAGTATATGGTGAGCGTAAAAAATATCTGACACCTTGA
TAACAGTGAGAAGCTTAGGTAGAACATACTGCTGTAATGTAACAGTCATT
TACAGGACGTGTTTCAGTAGTGCAGTCCCGTCTCTGTTATCTCCCGGCAG
GTGAAGGTGCTGGTGCCGATGAGGAACCCGAAGGACACGGCGGTGTCGGC
GTTCCATTTCTCGAAGAAACTGATGCTAATGATCGGCGTGAACGTGGACC
TGACTTGGGAAGACTTTGTTCAGGATTACAGTGCCGGAATAGGTCAGTGA
CTGGCTACCTTAAAATCTTTGCCTCCTTGTACGAAGACTTTCCTTTCGGG
GCCTCGATGTTTGTGTGGTTTTCGTGGTAATTTGCATACACTGTCCTTAG
AGTGGCAGAAAGGGAGTGGGAAGATGTCACCACAGAAGTCGGACTTACGT
GAGTGGCAGGAAGTATAGTTCAGAGATGATAGTTTATCAAATATGACAAA
CATTCCAATTCATGTGGTCAATAGAACAGGCTACTAATTCACGGAGGTAT
TGTTTTCCGCCTGTCTGTGTCTTCGCAGTTATAGTCATATTTGCTTTTCA
CATGCGTAATTGGCTAATCCGTGATCCTTGCTTCCTCCCTAGTGCCATAC
GGAGACTTCTGTGATCACGTGTCGGGCTGGTGGCAGATGCGGGACGACCC
CCACTTCCTCTTCCTTAAGTACGAGGACATGAAGAAGGTACGGTACAGAC
GAGACTACCTAGCATTTACATCATGGAGAAAATAAATCGTTCGCCAACCC
CTCCCAAAAAAAGACTTACCGTAAGTTTCCATTGAATTGTTCAGTCGCTT
TCAACTGTCTGTCCCAATTGCTCAGGTAGGACACATGACTTTATGTGCGT
GTGACGTCAGCGATAGGTCAAAGGTTGTTGGAAGTCAATATCGCCCCCTG
GTCCCAATCAATTTAAGAGAAGATTGGCGCAGGAGAGCATTCAAATATTT
TAGTTGGTGAACAGTTTAGATCATCTTGAATATAATTTACCAATTCAGAC
ATTTCATGCTAAGGAAGAGCACAGATGCCTTTTCCATATAGACCCCATGC
TAATTCGCATTTTGTTACTTGTTGACAGTATATAGGTATACCTGAATAAA
ATTTTCATAGCCTGCTGAGCGATCTTCAACGTAGGTGGGAATATCAGTCA
TTAGTTGGCTTGACGTTCGTATGTGACTATCGCCGGTTTTGTACAGGAAA
AGACGCACTCTTTGTACCCTTACAGGATCTGCTGAGTGCTGTGAAGACCA
TCGTGACTTTCCTGGAGGTTGATCTGGACGAGTCGACCGTAAAAGGCATC
GCAGAGGCCAGCACTTTCAACAACATGAAGCCAGTCCTGGACAATGCCGC
GGTGGCTGAGAGTAGGCACATAGCCAGGAAAGGTCGGTGTCGAAGCCATT
GTCACCAGAGAACAGGCGACATGATTAGCAACAGCTGGCGTGAACTTTTG
TGTCAAACTAAAAGACTGTACAACAATGTAAGCGAGAAGTACCCAGAAAA
GGTGACGAAAACAGAGCAACCTAAGTCTTTTTTTCTGAGTCAAGCACCTC
TCGAGTCATACCGTATGACTACACGATCAACATACGCTAGAAGAAACCAA
AAAGGTATTTGACGAAACAGCATAGATGCATAGACTTTTACCGATAGTTT
AGTCAGAGACACTGAGATTGCATATGAACATTTAGGACAAATGATGTTGG
ACAGGGCAATATGGAGTGATGTATGTTCTTATTTAGTCCCGGCCGATGGC
CGAATGATGATGATGATGATAGATGCCAAAGAAATAAATTTAAGTCATTT
TTCTTATTCAAGCACCTCTCGAGTCAAACTCTTTCACCATGACAGCGCAA
CATCACATGATACTGACAGAATTTGCTCAGGCCGCGTTTCACTTCAAAGT
TTTAAAATGTTTTTTGTACAAACTTGCAGGCATCATTGGTGACTGGAAGA
ACACTTTCTCTACGGAGGAGAGTGAAGCGTTCGACGCCTGGTGTGAGAAG
AAGCTCGGTGGTACAGGCCTCACGTTCGACTTCGAATAAACTCGCTTTCA
TCGTTAATCATAGTTAAAAAGAAGAAGAAAATGCCATATGACAAGTTGGT
CTTGATTTTGAAATCGTACAAAAATAGGTAACGAAGCAGACATATGACAT
GCACGGATAGTTCATGACATACTTACTAAATTTATTCTAATCTGTAACAA
AGCTCACGAAAAAAATGTTTTGACTGGATGAAATTATATATAGGTATATA
CATATACATATACATATATATATATATATATTTCATTATGTAATTGCTGA
TATACATAACGATTGATAAAGGAGGTAAAGAAATGACTTCCTTAAACTGA
GAGTTGATTTTGGTAGAAAACGTATTCTTGATGCTTGCCTACGATTTTGT
GTGTGTGTTGCTATTGTGGTTAAGTAATGTTGTGATCATGTCTTGGTGAT
TTTGTTGGTGGGGGGGGGGGCATAAGGTCTTCTCAGACTCATCTAGAGTG
TCTAAAACAGTTTTGTACAACCCTTATTATATTCTCTCGAAGATCAACGT
CATCTACCATAAGGCAATGTTGTAGACAGAAGAATACATCGCAAAAATCG
TTTATTCGTGTACCGTGTGCTTCTAAATAAATTCATTAAATGTATACTTT
CACCCAGTGGGACGTTTTAAAATGTTTCTGTACTTGTAGCGAAGAGAGTC
TGCAGATTGTCGTACTAAAACATATAATGGGCCCTTCTCTTCCGGTGTGA
CTGTGATACGTAGTACTGTAAGTGCATTCAATATGTGCCCGAGGACTGTT
GTTCATGTGTTTGTCCCGCCAACCCTAAACACGCTGGACATCACGTGAAG
GTGTGGTCAGTCGTAATTAGGCCACCTGCGGTGAAAGGTCATCACAGTTA
CATTAAGTGACTTCTTTACAACTGTCGACACCCATTCACTCCGGTAAGTA
GTAACTTCAATACTACGGAAACAACGCATGTTTAGTAAGATTTGGGTCAT
TTGATGAAGGGATATATATAGACACCTCGTTCACAGAACCGGGTACAACC
TTTAGTTCTGTCTCGGAAAAATTGCCTCGTCGCGATGATCAAGCGTGGAC
TGGATTCCAGTCTTGTTCTACAATTTTGTGAACTTCCAACTCTCGGGGCA
GCGATCGTTTTAAGCGGACTAGAGCTAACAACCCTAGATTGCAGGGTAGC
ATTGGCCAGAAATCCTGGTTTGTTATAGGACGTATTAGAAAGATCGAGAG
CTAAATACAATCTTAAACCATATGCATGTTTATGTAACTTTGATACCATA
GTCCATCGTGGGCATTAAGTATGGTGTGCTGCAATAGCCAAATATTTGCG
AAGAGGGCGAAAGAGAGTCGGTAGCTATGATAGCCAGGTTTGTATACCAG
ACTCGCGCCGAAAAACACCGTGTAAGAAGTAATGCGACCTCCCCCCCACC
AGCATGAGCCGAGGAATGAGCAACCCGCGTCTGTAGCAGTAGAACTAACT
CCTCGAATTCAAGCTACTGTCTCCGTCTGTTTCACAAACACAATACAATA
GACCATACACACTTTATTTGTAAATGGATCGTCCGATGCTTACCTTGTGT
CGGTTTGTTTACCCGGTTTGTTGATGGGACCTTAACGTGCTACAAACACT
CTACACAAGACTCGTATGTATAGGTGGTGGCATCAGCTTATTTCTTGGCT
ACATTATGTATTGCTGATACGTGTACTGTAGGCATTATTGCTCACGCTGG
TTTGGATGTGTTTATGTATTTATGGGCCCTTTGAGTCTGAATCAAACAAT
AAATGAATGAATGAATGAATTGTTTACAGAAGGAAATTCACTTGAAGGAA
CGGTACCTAGTGTTATGCATCTTAAAAGCGTGTGATAAGGCTTGGGCTAT
GGCATTAAGAAATTCACCAAATATTTTAAGATTTGATATGAGATCTCTAG
TTCCTACAGGTTACCATGGGCAACCGTCACGGTTTGATGTGGACCCACCA
GGGACTCCCTCTCCCTCATGACGTCACCAAGGAGACCCTGGATGCCCTGC
CAAGTTTCCAGATCCGAGATGACGACGTTGTTGTGGCGAGTTATCCCAAA
ACAGGTCTTTACGTGCATGATCACAGATTTTCCCGGTATTTTCTTCTTTC
CTGCTAGTAGTAAAATTTGTCTATAACTAACTTTTTAATTAGTAGTAAGA
ATGAGAGAATGTTACGTTTCAAAGCCAGACCTGTATTGTTTGACGTGGTC
GTGCAAAAGTACTTCGATTCTTTAACATGTACCTAGACTTCAGTCCAGAA
AAAACACGCTAAGGTATATCTAGTTATATCCTGTGACTGTATGTGAAAAT
AACGGCAAAATTCATCTGTCTATTGCGTTGCGTGGTCACCGTAAAGCACA
ATAGGCAAAGTTTTCTACTCCTGTAACAAAGTACTCTGCAATAAGCCAGT
TCAAGGTTTGAAGTAGTCATGCGCAGTGTGATGCATTGTATGTTATATGT
TAAAAGTGAGGCCCATGAGACATAAACTTAAACACGCCCGAACCCAGTGT
CAAGCATGCGCCCAGGGTTATCTGAAAAGCAGATCCGTAGTTCTGAGATT
TACTCTAGTTAAATAAATAAATTGAAATTGAGATAAAATTGAACTGTTTA
CGTGATAGGAACCTTGATCTTTGACCTCACGCATGCGCAGCTCAAACTGT
GTACCGGCTTATAGACGAGAAGCCAAAGTTGAGTGACAGTCACGTCATAT
GTTACTTCCCGACAGAAGATAGCCCATGATATTCATACTATAGCATTTCA
ACCAGCCATTTTCACCGCTGTTCTCCAGGGACAAACTGGCTGGCAGAGAT
CGCAGCTAAGATCCTACTAGCCGCGGGAAAAACAGAAGAAAGTTCGGACA
ACCTTGTCTACCCCTTGGAGGTGAAGCTACCGACAGACCCACAGCCCGGC
TACATGAAGCTTGCAGAGATGGCCTCCCCTCGTATCGTGTTGACACATCT
ACCAATCAAGTTTGCCCCGCAATGGATATCCAAGCCACAGACTAAGGTAA
TTTCAAAGTAGCCCAAAGAAATATAAAGAGGGCTGCCCTGACTTGACAGG
CCTTGTCACGCGCTTGAACTCACCACGGCGCTCCGTCGCTAGTTGCCAGC
TATCAAAATGGTCATGTTCTGATGAACGAAATTTGGACATATTGATCTTT
ATAACATATATAAGTAAGAAATGTATTCATCAATATAACCAATTTGCTCG
GCATTACAACTGGTATACGCGGCACTACGTTTTCGTAAATTACATTTCTA
CTTTAAGCGAGAACACGAGGGTGTCATAACTTCGGACGCTTTTGTACTTT
TGTCTTCAGAATTCGTTGATGGCTTTGAGTAAACAGAAAATTATCTAGAA
TGTAGAATATTCTGGCTTTTATTTCTGAGAGTTGGTAAGGACGTCTGTAT
CTGTATCTATATAGACTTACATGTAAATCAAAGCACAATAGATAGTGTCT
TAACATTTGGTGTTGATAACCAATGTCTGACACCTTAATAAGAGCAGCTA
AAGATGATCATACTGCTGTTTATGCAGGACTCGTTTCAGTAGTGCGGTCC
CGTCTCTAATATTCTCACGACAGGTGAAGGTGCTGGTGCCGATAAGGAAC
CCGAAGGACACGGCGGTGTCGATGTTTCACTTCTTGAAGAATGTGCTGCC
AATGATTGGGGCGAACGTGGACCTGCGCTGGGAAGACTTTGCTCAGGAAT
TTAGCCGCGGACTAGGTCAGTTATAAAATAAATAAAAAAATGAAATGATA
AAAGTTATACATGCGATTCCGGTATCCACTGACTGGTCAGAACTGAGGAT
AGATATGTTAAAGACGTGGGTGAATTATTGAATGAATAATAGAGTAAATG
AATGAATCAATGGACAAATAAATGAATGAGTGAATTAATGAATGCATGAA
TGAATGAATTGTTCCCCGCAAACATGAGCTTATTTGACACCAAACTTTAA
AGTTACATAGATATTGCAATATCACATAAGACGAGTGTGCAAAGGGAGAG
TATGCAAAGCATGTCGTTGGAAGCACTTTTATATGCGCAATTTGCTTAAA
CTTGCTCCATGATCCGTCCCTAGTGCCATACGGAGACTACTGTGACCACC
TGTCGGGGTGGTGGCAGATGCGGGACGACCCCCACTTCCTCTTCCTTAAA
TATGAGGACATGAAGAAGGTAGAGTACAGATGTCACTGCATTGTACGCCA
AAAAAAAAAATACTCAAGCAACTGGATACAATTTCCAAACGTCTGACCAT
TTCCGAAATCATATCCAGTTGCTTGAGTAACTGCTTTTTGGCGTATACCA
TTTACATGGATGTTAACCTGCATCGACGCCAATGCATTGTTACCTGAATG
TTACCTGTTGACAGAATAAAGGTATGTCCGGATGAAATTATCAGAACCCG
CTCACACGACCTTTCCACTAGGGCGGAGAACGCAGAGCGACCAAAGATTT
GACATATTGCTCATCTAATTTTGTTGTCTTTTAAATCATACTTGTACATC
TTGCATTGTATGATATAATCCAGTTATGAAAGCAATGGTCACACAAAGAC
AATTTTGGTCGCTTAACGGTCACCCAGTGATCACCGTCTAGTGGAAATGA
GGTCTGAGTTATCGTATGTTGGGCATATCAGAGTTAGTCGGTAGGCATGA
CGGTTTTTTTATTTGTTCAAGTTGTGCAAGAAAAAAAAAAATTACTCTTC
CAGAATCTTCCGAGCGCTGTTAAGACCATTGCGGCATTTCTGGAGATTGA
TCTGAGCGAATCGACCGTACAAGACATCGCAGAGGCCAGCACTTTCAACA
ACGTGAAGCCAGTCCTGGACAATTCCACCATTCCTATCAGAAGGAACATA
GCCAGGAAAGGTTGGTATCCAAGACATTGGCCTCAAGGAGGAGGCGATAT
AGTTCGAACAGCTGACCAAGGTCAAGCGATTGTATTAGGGAGGAACCGTC
TTTATTTTGTAAGACAAGATGAATAAAAATACCTTCTAAAAGCCGATGGC
AGCCCTTCTTCTGAGTTGTTATGTTCAGGAGGGTGCAAGGTAAAGATACA
ATATAACATTGTTCGTCGGACATTTCAAAGTGTCGCTTTAAAAACCACAA
GATAACATGACAGAGCAACTTTTCAGTATTTTCCTGAATCCAAGCATGTT
TCCAGTCCTACTATTTCACAGGTCTAATGCTGACAGAAGTTGTTCCTGCC
GGGTTTTACTTCAAAGAATTTCTAATGTTTTCGTCTAAACTCACAGGCAT
TGCCGGAGACTGGAAGAACACTTTCTCTACGGAGGAGAGTGAAGCGTTCG
ACGCCTGGTGTGAGAAGAAGCTCGCTGGTACAGGCCTCACGTTCGACTTT
GAATAA Coding sequence (CDS) from alignment at Sc0000042:637724..646629+ >Blg00490.0 ID=Blg00490.0|Name=Blg00490.0|organism=Branchiostoma lanceolatum|type=CDS|length=861bp|location=Sequence derived from alignment at Sc0000042:637724..646629+ (Branchiostoma lanceolatum)
ATGAGCCTCCGCAGGTTTTTGTGGACCCACCAGGGAGTTTCTCTCCTTCG
TGACGTCACCAAGGAGACTCTGGATGTTCTGCCGAGTTTCCAGATCCGAG
ATGACGACGTTGTTGTGGCGAGTTATCCAAAAACAGGAACACACTGGCTA
ATGGAGATCGTCGTCAAAATCCTGCGAGCCGCAGGAAAAACAGAAGAAAG
CTCGGACACCATGAATGTTGGTCCCATGGAGATGAAGCTAGCGACAGCCA
CACAGCCCGGCTACATGAAGCTGGCAGAGCTGCCCTCCCCTCGCCTTGTG
GCAACACACCTGCCCATTCAGTTTGCACCAAAAGGGATATCCAAGCCGCA
GAATAAGGTGAAGGTGCTGGTGCCGATGAGGAACCCGAAGGACACGGCGG
TGTCGGCGTTCCATTTCTCGAAGAAACTGATGCTAATGATCGGCGTGAAC
GTGGACCTGACTTGGGAAGACTTTGTTCAGGATTACAGTGCCGGAATAGT
GCCATACGGAGACTTCTGTGATCACGTGTCGGGCTGGTGGCAGATGCGGG
ACGACCCCCACTTCCTCTTCCTTAAGTACGAGGACATGAAGAAGGATCTG
CTGAGTGCTGTGAAGACCATCGTGACTTTCCTGGAGGTTGATCTGGACGA
GTCGACCGTAAAAGGCATCGCAGAGGCCAGCACTTTCAACAACATGAAGC
CAGTCCTGGACAATGCCGCGGTGGCTGAGAGTAGGCACATAGCCAGGAAA
GGCATTGCCGGAGACTGGAAGAACACTTTCTCTACGGAGGAGAGTGAAGC
GTTCGACGCCTGGTGTGAGAAGAAGCTCGCTGGTACAGGCCTCACGTTCG
ACTTTGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00490.0-exon-Sc0000042-1570713199:637724..637769 | Blg00490.0-exon-Sc0000042-1570713199:637724..637769 | Branchiostoma lanceolatum | exon |
| Blg00490.0-exon-Sc0000042-1570713199:638488..638629 | Blg00490.0-exon-Sc0000042-1570713199:638488..638629 | Branchiostoma lanceolatum | exon |
| Blg00490.0-exon-Sc0000042-1570713199:638848..639068 | Blg00490.0-exon-Sc0000042-1570713199:638848..639068 | Branchiostoma lanceolatum | exon |
| Blg00490.0-exon-Sc0000042-1570713199:639324..639465 | Blg00490.0-exon-Sc0000042-1570713199:639324..639465 | Branchiostoma lanceolatum | exon |
| Blg00490.0-exon-Sc0000042-1570713199:639816..639910 | Blg00490.0-exon-Sc0000042-1570713199:639816..639910 | Branchiostoma lanceolatum | exon |
| Blg00490.0-exon-Sc0000042-1570713199:640449..640605 | Blg00490.0-exon-Sc0000042-1570713199:640449..640605 | Branchiostoma lanceolatum | exon |
| Blg00490.0-exon-Sc0000042-1570713199:646520..646629 | Blg00490.0-exon-Sc0000042-1570713199:646520..646629 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:637724..646629 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00490 |
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