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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000042:2061811..2065699- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00489.0 ID=Blg00489.0|Name=Blg00489.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3889bp|location=Sequence derived from alignment at Sc0000042:2061811..2065699- (Branchiostoma lanceolatum)
ATGTTTTTCCCTTGGGAAAGGTACCAGTCCTACATTGTATTTCCTCACTT
GGCTCTGGCTGAAATGAATACCTAGATTCAGTTAGGGACATAAAGCCGGA
GGTCCTGTGTTTTAAGGAGAGCCACATCTCAAGAAAATGAAAGATTTGAG
TGGTTGAAACTTACAGTCTGGTCTTGCACAGCTTGTACAAAACTGGCGTG
TTGCACCTTAATGCAGTCTACCTGTTATCTGGTGCAAACAAACAAAGTCA
AGTCTTTATATGTAACTACGGTACAATTCATTGATTGATCTATACAACTA
CCGTAAAATCCCTTTTTACGTACGCACTTTTAAAACTTTTCAAGTTGCAA
GCAGGTGCTCCAGGCCGACGCCAAAGTCGGGGTGCGTACGTTAGGAGGGT
GTTACATGGCCAGATAATCTCATCAGGTCAGCCTACGGAGGGGACAAAAT
CCCACACCTGGGGAAGACAACCATCTCTGGAAAACACAAAGGCCGAGAGG
TCAAGTGTACTTTCTTTGTGACCAAATCTAAGGGACCAAGCATCCTCGGA
TTGGCAGCGTGCCAGCAGCTAGGCATCATCACAATCCACGAGATACAAAC
TACCCCAGAGGATGGCAAGATCAAAGAAACGGTGCCGATCAAGGACCGCC
CTGCCATCCACAACAAGGAACAACTAATAAGATTGTACCCGGAGTGTTTT
GACGACACAGTGGGATGTTTTGAAGAGGAATACCACATCACTGTTGACCC
AGACGTAGAACCAGTGATACATCCACCTCGCAGAGTGCCACTAGAGCTGC
GAGAGAGGCTGAAGAAACAGCTGGAAGAGATGACGGAGAAAGGAGTCATC
AGCGAGGTCACACAGCCAACAGACTGGGTAAACTCCATAGTAATAAAGGA
GAAACCTAATGGCAAACTGCGGATCTGCCTCGATCCCAGAGACCTGAACA
GGGCACTCAAGAGGAACCACTACCCGACACCCACTCTAGAGGAGATAACA
CCCTCTCTGGCAGGAGCCAAAGTGTTTAGTAAACTGGACGCCAGTAACGG
GTATTGGAATATCAAAATAGACGAAGAATCATCACTGCTCACGACCTTCA
ACACCCCCTATGGCAGGTTCAAGTTCAACCGTTTACCATTCGGGCTCAAG
GTCTCGCAGGACGTTTTCCAGAGGAAGATAGACGAAACGTACAACGGGTG
CAAAGGAGCAATCGGAATTGCTGACGACATCCAGGTGTACGGAAAGACAG
ACGACGCTCACGACTTCCATCTGCATGAAGCAATGGAGAAGACCAGGCAA
GCTGGCATCAAGCTGAATGCATCCAAATGCATAATCAAAGAAAGTGAGTG
CAAGTTCTTCGGAATGGTCTACTCAGCCGAGGGAGTCAAGCCAGACCCCG
AGAAGGTGAGGGCCATAGAAGACATCAAAGAACCTGAGGATGAGAAGGAA
CTAAGAAGTTTCTTAGGTCTGGTTCAATACATGAGCGCATTCATCCCCAA
CCTCGCGGACAGAACAGCCAACATCCGTGAACTGCTAAAAGAAGATGTTG
AATACGAGTGGAGTGCATCACACACTCAAGATCTAAACAGGATAAAGCAG
CTCATCAGTGACAAGACAACACTACAATACTATGACAGGGAGAAACCCGT
CGTACTTCAAGTGGATGCCTCAATCAAAGGAGTTGGAGCAGCACTGATAC
AAGAGGGGAAACCTATCGCGTTTGCCTCCAAAGCCCTCTCACCTGCAGAA
ACAAGGTACGCAAACATAGAGAGAGAGCTACTACATGTAGCTGTGGTATA
CGGCTGTGAGAAGTTCCACACCTACTTGTACGGAAGAAGTTTCGAAGTCG
AGTCGGACCACCGACCCTTGGAACAAATCAACAAGAAGAACCTCACAAAG
GCACCAAGCAGGTTGCAACGCCTGTTACTGAGACTGCAAAGCTATGACAT
GAGCATCCGGTACAAACCAGGGAAAGAGATGTTACTAGCAGACGCACTCT
CCAGGCTGTCACAGCACGACAAGCAAGAGATGGATGGTCTCAAGGTCCAG
ATCCATCACCTCGTGAAAGTGACAAGTGTGAAACTGGAGCAGATCAAAGA
GGAGACCAGCAAGGATGAAGAGCTCCAACTACTCGCCCAGACAGTAACAC
AGGGATGGCCAGAGAAAACAAAAGAAACACAAGCAATCATACACGAATAC
TGGACCATCCGAGACGACATCTCGGTAGAGGATGGAGTCCTCCTGGCTGG
GTCCCGGATGATTATACCCAAGTCCATGAGAGCAGAGGTCCTAGAGATGA
TTCATCAAGGACACCTGGGTATCGAGAAATGCATACTCAGAGCAAAATCT
GCAGTCTACTGGCCGGGCATGTACAAACAAATGAGAAAGCAGTTGCAGCA
TGCCCCACATGCCAAAAGCACAAGAACTCACAACAGAAAGAAGAGATGAT
GCCAACGGAGATACCAAGCAGACCCTGGCAAACAGTAGGCATGGATCTGT
TTACCACCAATAACCAATGGTTTCTACTCCTGGTAGACCACTACTCCAAA
TTCCCATTTGTGAAGAGTCTCGCCAACCTGAAGGCATCAACAGTAACATC
CAGCATACGAGGTATATTCGCAGAACAGGGAATCCCAAGAGAAGTCATAT
GCGACAATGGTACACAATTCACAGCGCAAGAGTTCCGGCAGCTGGCCAAC
GAGTACGGATTCAAGATCACAACATCATCACCGCACTACCCTAAGGGGCA
TGGCTTCATAGAAAGACATGTGCAGACGGTGAAGAAAACGCTGATCAAAT
GCAGAGAATCAAGATCAGACCCAAACCTAGCCTTGCTAGCCATCCGCACC
ACACCGATTAAGCCAGGTATGAAGTCGCCAGCGGAGATGCTAAACGGCCG
GAAGTACCAAGACATCCTGCCGACCAAAATACCTGCACCCCTTGATCAGG
AAGAAACAAGGGCCAAGCTGGAAAAGGCACAGCAAGCAGCGAAACAACAC
TACGACACCCAGGCAAAGAGTCTGCCTGAACTGGCCAGGGGCCAGAGCAT
CCACGTACAGGACCCTATCCGAAAAACGTGGAGCCCCGGCAAAGTCATTG
ACAAAGCTACAACACCGAGATCATATGTTGTAGAGACCGACGCCGGAAGA
CAACTGAGAAGAAACAGAGTACACATTAGACCAACTCCAGAAGTGAAAGC
ACCTGCAGCAACGACTCCAGAAGTGACAACACCTGCAGCAACAACAACGC
AGACTACACATGAGTCAACCCTGCAACAATCAACTATTGCAGCACCACAC
GCAACAACACCGACAGCGAGAACGCCGAGTATGACAAAGTCAACGAGAAC
GAGATCGAACATCCAACCACCAGTGCGTTACCGCTGACGAGAGAAAGAAC
TGTTCTCAGATAGAAAGAACTGAGAAAAGCGATTAGACTAGAACTGTTCT
TAGAAGTTAGATGCAAAGTGTAACAGCAGAACCCCATTGTTATTGTTAAA
GTACTAACCAAAAGTTGAAAGAAACCCAAGAACGAGTGCCAAAGTCAAGG
ACAATCACGGACAATGAAAGGAACAAGTATAAGTTTACTACTTATACAGA
AGTATCAGATCTCAGTAGGACAACAACCACTTTGTGTCATTATAACACCA
ATAACGTTAAATACAAGTTCACAAAGATATATTCGGTTCAGTCATGTTAT
GTTATGAGCTAACAAAAGTTGCACGAAACATATATTTTTCTAACAAGCAA
AAATATATACACTCAATAGAAGCAGAGATCAAGCATAAGAAAAAGAGCTG
GACAAGGACTCTAGAAACAATCCAGCCAGAGACTGTTCTACTTAAAGAAA
GAGGGATGTTACATGGCCAGATAATCTCATCAGGCAAGG Coding sequence (CDS) from alignment at Sc0000042:2061811..2065699- >Blg00489.0 ID=Blg00489.0|Name=Blg00489.0|organism=Branchiostoma lanceolatum|type=CDS|length=2043bp|location=Sequence derived from alignment at Sc0000042:2061811..2065699- (Branchiostoma lanceolatum)
ATGTTTTTCCCTTGGGAAAGGTCAGCCTACGGAGGGGACAAAATCCCACA
CCTGGGGAAGACAACCATCTCTGGAAAACACAAAGGCCGAGAGGTCAAGT
GTACTTTCTTTGTGACCAAATCTAAGGGACCAAGCATCCTCGGATTGGCA
GCGTGCCAGCAGCTAGGCATCATCACAATCCACGAGATACAAACTACCCC
AGAGGATGGCAAGATCAAAGAAACGGTGCCGATCAAGGACCGCCCTGCCA
TCCACAACAAGGAACAACTAATAAGATTGTACCCGGAGTGTTTTGACGAC
ACAGTGGGATGTTTTGAAGAGGAATACCACATCACTGTTGACCCAGACGT
AGAACCAGTGATACATCCACCTCGCAGAGTGCCACTAGAGCTGCGAGAGA
GGCTGAAGAAACAGCTGGAAGAGATGACGGAGAAAGGAGTCATCAGCGAG
GTCACACAGCCAACAGACTGGGTAAACTCCATAGTAATAAAGGAGAAACC
TAATGGCAAACTGCGGATCTGCCTCGATCCCAGAGACCTGAACAGGGCAC
TCAAGAGGAACCACTACCCGACACCCACTCTAGAGGAGATAACACCCTCT
CTGGCAGGAGCCAAAGTGTTTAGTAAACTGGACGCCAGTAACGGGTATTG
GAATATCAAAATAGACGAAGAATCATCACTGCTCACGACCTTCAACACCC
CCTATGGCAGGTTCAAGTTCAACCGTTTACCATTCGGGCTCAAGGTCTCG
CAGGACGTTTTCCAGAGGAAGATAGACGAAACGTACAACGGGTGCAAAGG
AGCAATCGGAATTGCTGACGACATCCAGGTGTACGGAAAGACAGACGACG
CTCACGACTTCCATCTGCATGAAGCAATGGAGAAGACCAGGCAAGCTGGC
ATCAAGCTGAATGCATCCAAATGCATAATCAAAGAAAGTGAGTGCAAGTT
CTTCGGAATGGTCTACTCAGCCGAGGGAGTCAAGCCAGACCCCGAGAAGG
TGAGGGCCATAGAAGACATCAAAGAACCTGAGGATGAGAAGGAACTAAGA
AGTTTCTTAGGTCTGGTTCAATACATGAGCGCATTCATCCCCAACCTCGC
GGACAGAACAGCCAACATCCGTGAACTGCTAAAAGAAGATGTTGAATACG
AGTGGAGTGCATCACACACTCAAGATCTAAACAGGATAAAGCAGCTCATC
AGTGACAAGACAACACTACAATACTATGACAGGGAGAAACCCGTCGTACT
TCAAGTGGATGCCTCAATCAAAGGAGTTGGAGCAGCACTGATACAAGAGG
GGAAACCTATCGCGTTTGCCTCCAAAGCCCTCTCACCTGCAGAAACAAGG
TACGCAAACATAGAGAGAGAGCTACTACATGTAGCTGTGGTATACGGCTG
TGAGAAGTTCCACACCTACTTGTACGGAAGAAGTTTCGAAGTCGAGTCGG
ACCACCGACCCTTGGAACAAATCAACAAGAAGAACCTCACAAAGGCACCA
AGCAGGTTGCAACGCCTGTTACTGAGACTGCAAAGCTATGACATGAGCAT
CCGGTACAAACCAGGGAAAGAGATGTTACTAGCAGACGCACTCTCCAGGC
TGTCACAGCACGACAAGCAAGAGATGGATGGTCTCAAGGTCCAGATCCAT
CACCTCGTGAAAGTGACAAGTGTGAAACTGGAGCAGATCAAAGAGGAGAC
CAGCAAGGATGAAGAGCTCCAACTACTCGCCCAGACAGTAACACAGGGAT
GGCCAGAGAAAACAAAAGAAACACAAGCAATCATACACGAATACTGGACC
ATCCGAGACGACATCTCGGTAGAGGATGGAGTCCTCCTGGCTGGGTCCCG
GATGATTATACCCAAGTCCATGAGAGCAGAGGTCCTAGAGATGATTCATC
AAGGACACCTGGGTATCGAGAAATGCATACTCAGAGCAAAATCTGCAGTC
TACTGGCCGGGCATGTACAAACAAATGAGAAAGCAGTTGCAGCATGCCCC
ACATGCCAAAAGCACAAGAACTCACAACAGAAAGAAGAGATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00489.0-exon-Sc0000042-1570713199:2065680..2065699 | Blg00489.0-exon-Sc0000042-1570713199:2065680..2065699 | Branchiostoma lanceolatum | exon |
| Blg00489.0-exon-Sc0000042-1570713199:2062118..2065273 | Blg00489.0-exon-Sc0000042-1570713199:2062118..2065273 | Branchiostoma lanceolatum | exon |
| Blg00489.0-exon-Sc0000042-1570713199:2061811..2062032 | Blg00489.0-exon-Sc0000042-1570713199:2061811..2062032 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000042 | genome | Sc0000042:2061811..2065699 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00489 |
|
