Blg00479.3 (mRNA) - B. lanceolatum

Overview
NameBlg00479.3
Unique NameBlg00479.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Full-screen view
Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:168396..183679-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00479.3 ID=Blg00479.3|Name=Blg00479.3|organism=Branchiostoma lanceolatum|type=mRNA|length=15284bp|location=Sequence derived from alignment at Sc0000042:168396..183679- (Branchiostoma lanceolatum)
CTAGCCTGGATGCCAGACCCCCAACCTCTAACATATCTATCGTTGCCCAA
ACGATAGATATGTTAGAGATTGGGGGTCTGCCATCCAGGCTACATTTCAG
CCGAAGTCATTTTAAAGAGATTAGATGCGATCGTAGCCAATCGTTTTCCA
TGTGACTAATTAGCTGATGTGCGTACCTACGGCTAAAGCCCTAATCTTAT
CCTATCTAGCCAGACCCTCGGCATTCTAAATTTGATATGTGTTACCCTTG
ACTTTATAATGGGAATTTTATACAAAACGTGCGAGTATGACTAAAATATG
ATAACAAAACACACAAAGCGTAAGAATATTCGTTTGTTATCGATAAATTC
GTTGAGCGCGGCGTTGTGGAACTGGAAGTCGTGGTGGAGGTATGGCATTT
CAGCCGACGTCATTTTAAAGAGATTAGATGCGATCGTAGCCAATCGTTTT
CCATGTGACTTATTCAACTGGTGGACCGACTAAGTAGCTTATGCCAGCAC
AGGAAAGAACAAAAGATGGTCATGCCTTCAAGTAGTAGAGCTATGTACCC
AGCATTGATGTGTTCAAAACTTGCTATTTTGCTAAAAGTATCCCGAGAAT
GTACAAATGTACAGTAGGGGCATCCTGACTAGATAGCTTTGAACGAACGT
GGCTGTTACGTGTGAGCAAAAGACAATCAAATATGAGGTTCGGTTCAAAC
CCAGTGACAGTGAGCCTGTGTTGGACTCGGTAACCTGGTGGTGGGCACGC
ATATGGGATATATGCAAAACTGTCTTTAAGCATTTTTGATTATACCCCGC
CTCAAACCTCTACTGCTATGCAGGACGCGGTAGCAGAAATAGACTGAACA
TTTACCAGGGAAAAGCGATTTTACAACGACTTTGATTCAAGAATATGTTG
ATTCCAAACTATCCAAACTTCTGCTTCTGTATAGGAGACTGTTGATGTGT
TTGAGTTCTGGCTGGTTCACGCTGTTTAACAACGACTCGAGGAAGATTCC
TGTATTTCATTGTATTTGTCGTATACCTGATCTAATGCCTCTTTGCCGTT
TCGATATGGTCCATTGCAATGTCTTGTCTTTGTCAGCAGGGCTAGCCCTT
TGAAATAGCCTCAGGCTAGTTGGGCAGCCCTGGCTATGTGTCCTGAACAG
TCAAACCAATAAATGAATAAATGTACGAGCTACATGGACATTTAGTGGTT
TTCGTCGATTTCGAGTCGCATGATGTTTTCAATAACCTTTCTCACGCGGT
GGACATGATAGAATGAAGACGAGGCCAATGAGGCAAAGAAGCAAAAATAA
TGTACAGATTTAGTTTGCCTCCTAAATCACATAAAGTTTTAAAATATGAT
ATCCAAGTATTAGTATTACAACTAATGAAATGCACACAAAAAGATGCAGC
GATTTAGAGCTTCGTTGACCGATCCCATAGTCTCCGCCCTCCTCTGTCAA
AACGTAGAAATGAAAATAAAAACATAGAAATGCAAATTTTTGACGGTCAT
GGAGCCACTTCCTCATAGGTCGATTCTCTAATTATCAAGTAATCATTGGC
TAAACTGCTAATTGTGATTAACAGTTAGGATCGGTCTAATGTTTGCCACA
AGGGCCTCGTTTTCATTCTATCATGTCCGCCGCGTGAAAAAGGTCTATGA
CGGTCCTCTATCACAAACTCCTCCTTCCGCTCACGCCCTGCAGGACACGG
TTGATGTTTACGAGTTCTGTTTCTGTGCAGGACACGGTTGATGTTTACGA
GTTCTGTTTCTGTGCAGGACACGGTTGATGTTTATGAGTTCTGTTTCTGT
GCAGGACACGGTTGATGTTTACGAGTTCTGGCTGGTGGACTTCCAGCCCT
ACGAGTTCAGCCCGAACGGCACGCTGTTCAGCAGCGCCACCGGCGAGATG
CAGCGGCAGTACACCTCCCCGTGCGCCAGCTCATTCTGGAGACTCGACCT
CTTCAGCCCGTCCTACGGATACCCCTTCCCCTTCACAGACACCGGCAGCT
TCGTGTAAGGAAGGCTAATTTTGTTCGTTTCTTTGTTTCTTTGTTTGTTC
GTGTGTTCGTTTCGTTGATGGCTTGTTTGTTTGTTTGCCGCATACTGGTA
AACCACCTCAAAGCGTAACACACTCGACTCTTCAGTCCCTCCTACGGATA
CACCTTCCCCTATACCGACGTAGGCAGCTTCGTGTAAAAAAGGCTGCTTG
CTTGTTTGTGAACCACCTCATAGCGTAACACACTGGACTCCTCAGCCCGT
CTCACTGTTATCCATTCCCCTTCACAGACATGTGCAGCTTCGTGTAAGAT
ATATCATCTTTTGTTTGTTACGTTCATGAAGGTTAGACATCCAGGTGAAG
AATATTTAAAGACAATTCAATCTCTACAACTGGATGAAATGCGGAGATTA
CTTTCGGACATTTGTTTCTTTATTTGTTCGTTCACTTGTTTGTTGTTGAA
TACTGGTAACGTTAAACCACATCGGTATTATAATCGGTTCGTCTAGCTCT
CTAGGTTAAGTGGAAAATCATGGTACTGGAAAGGTCATTGGGAATGCATG
TTTATAATGATCTTTCAGCTGTAGGCCCAGCAATGTTCTCACATTTACCT
TGCTTACAACAGACTATTCTAAGTCAAGTTTAACGGTTAAATGTAGTTCG
ATATCATATTAGAAATTGAACCTGTGCAGAGTGGTATTGATTAGTCTTAA
GATGTAGTTAGATGTCACCCTTTCGTTATCACTGTAACTATGCTTGCACT
GTAACCGTGACCTGTGCTTAGCTCATCAGAGCATAAACGTGCAATAAAGG
TCTTTCATTCATTCATTCATTCATTCATTCATTCAAATTTCCGTGCGCGT
TGTAGGCCGACCAACGGCAGTGAGGAGGGCGGCGTGCCTCCCAAGCTGCT
GTACAACTACTACTTCAAGAGCGATCCCTACAACATCACCGACAACCGCG
GCGAGAGGGTGGAGCGGACGACCAACAGGATGCTGTTTCAGGGTATTCCA
TCTTTGACTTGTAATTAGGGTGGAGGGTTGTAGGGGGGTGGGGTGGCAGG
ATGGTTGCTAGTCCATTCCTGAAGGCATCTACAGCCTGCATAGTATGGCC
CGGTAGCTGATTCAATCGCGTTGCTATTTCGTATATTGGACAGGAACGGT
CACAAAGCAACATGGGTAAGGGAATGATGCCAAACATCTCTGGTTGCCTT
GTTTTTCCTTGCCTTGCTCCGCGGTTTCATCACCTATACGGTCAATTCGA
TTCTTTATTACAGACACACGAATGGTAGCCTGAATGGCGTTGATATTTAC
AAATTGACAATTACAAAGACTTAACACATTTAAACATACATATACATATA
TACATCCCTAACATGACAGGCGCCCATCATTGCGTACCAGATTCATGGTA
CCTTGTGTCCCTGAGCTACAACACTTGTCAACCACCTCCTATATTACTGA
CATGCTAACTGCACATGTTCACCGTGATCTTTAGGTTCCTCCTACCGCCT
GTTCAACTGCACGGATACCAGCGGCGGGACAGTATGGCGGTACACCAACC
AGACGGAAACAGTCGAGTTCCGCTCAACCGTCTACTTCACCAACATCCGC
CCCATCGAAACCTCGGACCTCACAAAGGTAAAGAATCATCTCGCATGCTT
GATATCCATCATCATGTTTCATACTCTTGACAAGTTGGAGTGTACATGTA
CACAAATATGTTGGATATCCAATATGTTCGATAACCAATCCGCTCATAGT
ATGGATATCCAACATATACTCATAGCATAACTCGTAGGGTCAGCTGTCAC
CATTGCATGGGTTCATGTAGGAGAAACAATAACTCTACTCCGTCAGCATC
GCTAAATCCATGTTTTGCCAAAGATCGGAGTCTGAAATGGATTCTGTGTT
GAACTTCTTTTGCTACCAATTCTATATTGGCTATGGGGATAGGCAGCAGG
GAGAAGATTAGTGTAGTGGTGTCATTGGCCAAACCTCTATTTTTGTATGT
CCAATCGTAGCGATTGCTCTATTGTTCTTACCGCTATATCCACTCCATTG
CCGTTGACCCCCAGGGCCACTCCTATGTCCAGTCGCACGCCGAGCCGATC
TACCGGATCTCCCCAATTACTCAACGTGGTGGTCACTTGCAAAACGCTTT
CTTATGTATGAAAAAAAAACACGTCCTTACCACAGACCATGTTGATAACA
CGTGTGTATGTTTCCTATGTCCAGTCGCACGCCGAGCTGATCAACCGGAT
CTCACGGATTGGCTCAACGTGGTTGGTCAATGGGGTGGTCACTGGTCAAA
TGTTTTCTTATGTATGAAAAAAAAATTACCATAGACGGTGTTGATAGTGT
GTGTATGTTTCTGCCCCCTGTATGTTAATGTCCACTGTTTGTGACCGCCC
AGGGCCACTCCTATGTCCAGTCGCACGCGGAGCTGATCTACCGGATCTCC
CGCATCGCCCTGGTGAACGTGGTGGTCAGCAGCTCGGCGCTGGTCAAGCC
GCTGCTCAACTACGTCATCATCTCCCCTGGTTACGANATATCCCCTGGTT
ACGAGCCTGACGGCACGCCCGCCACCGACCTCGCCACGGTGGAGATACAG
GTGCTATATTTAGCTTGAAAGTTCATCTGTGTTTGTAGAAATCATTCTTA
AACAAGTTTTAACTATAATTTCCAACACAAGAATTGGACTCACACAAATT
TTCGACTGTACAACACCAGTCTTTGTCAAGGAGTGAGCAATCCACCGCTG
GGCGCTAGACGCACTGCTTAACCCAGCTTACATCCCTGTTCGTTCCTTAG
TTCACGACGTCCACGCAGTCGCCTTCGGGAGAGCGGAACCACTACATCCA
CTCGGGAACGTCGCTGAACTACACCGCGGACTACGTCACCCTGCACGACC
TGGACGCGGTCACCAGCTACCCCACCACCACCCCGCCCTGCGTCATCACT
AACGGAGCCATCAAGTAAGATTTCTTTTCTTCCAACAGTCATCTTTCGAA
GCTGAGCTTGAACTAATCTCCAAGCAACTGACAGCATGATAAATCGTAAC
GTTTTTTTAGTTGATGGCGTCGTGTTAGAAAATTGGTTTACCATCCTGAT
ATTTTGTAGTCCTACCTTACTTATCCAGACTTTTACTGAGAGAGAACTTT
GGTATATTGGATTTTGATTGTGTCTCGAAGCGGTGCAATGGCCGAGTGGG
TAGAGTGTTCGTCTTGCACACGGTAGGTCGTGAGTTTGAACCCCGGCCGG
GTACATACTGCTTTCTCTGCTTAGCATTCAGCATTTGGGAAAGAGTATGG
AAGTTAAACACACATCACTACCAGCGGACTAGCCCCCTGCTGTAGAGACT
TGCACAAAGTTGTGTGGCCCAAGGGCTGAGAATCGGAGATGGGCGCCACC
ATATGTTCCACTAAGTGGCGCGGGAGGACTTTAACTTTAATTAACTAACT
CGAAGCGGGCAGCTCTGATATGCGATGAACAGGTTGCCTTGATGACAATG
TGAAACTCTATCCACAGCCTGTGTACTCAGACGTGGACGTTTGTGGTTAT
CCTGAAGATCACCCCGCGGAATGTGGACGACGGTCTGCCGGTGGACGCGT
CAGGTGACTGATATATTCCTACTTTAAGATTGGTGTACTGCGAAGGTATC
TGTTTTCAGTGATCCTTTTGTGGAGATCATACATCAGATTTCAAGCCTGC
TGCGTTTCATATGCATCCGATATCGACGTTTCTCTTTGCCCTGGCATTTT
ACTATGCTACACTGCACTGCACTGTGTTTGATTTGGCGTTCTGGATTCAT
ACTAAGCAGTGGAAATCAGTTATATAGAAACTTTACTGCAGCACCGCATA
GTCCTTGTTTAATCCTTTATTGCGAACAGCGAATGCTTCTAATGACTTAG
CTGCCAATCTTTGTGACCTATGTATAGATGTATCCACTAAGTATAAGATA
TAACGTTACATAAACTTGTTTTGTTGACACCGATCTCACCAGGAGTGTTT
GCCTTTGGGCTCTTAATAAGTTTGATACTAAAAGAACATCTGCGTATCTC
GAGTGCAATCCATTGGGTGATCTAAATACGTTCTCACCAGGAGCCTTCGG
ATCATGAGCAAGAGAGGACCTGAGTTTAGCAATGAAAGAACAACTATCAA
TGCTTCTTAAGACTCGGATGCAATCTAAATATTTTTTGCCCCCATCTGGC
CAGGCGTGTTTACATTCCGGTTCATGACGGAACAAAGTTGTAAAAGAACC
CACTTTACTGCGAACAGTGAATGCTTCTAACGACTTAGCTGCCAATCTTT
GTAACCTATGTGTATGTATCCGCTAAGTATAAGACATAGCGTTACATAAA
CCTGTTTTGTTGTCCCCGATCTGGCCAGGCGTGTTCACGTTCCGGTTCGT
GACGGAACAAAGTTGTAAAAGAACCCACTTTACTGCGAACAGTGAATGCT
TCTAACGACTTAGCTGCCAATCTTTGTGACCTATGTATATGTATCCGCTA
AGTATAAGACATAGCGTTACATAAACCTGTTTTGTTGTCCCCGATCTGGC
CAGGCGTATTCACGTTCCGGTTCGTGACGGAGCGGTGTAACGACACGACG
GCTGACGAGTCCTCCGCGAACTGCACCATCGTGGACAACATCAACCCGTC
CGTCATCTCCATGAACATCACCATTCAGGTTAGAAGATTTCAGTTATCTG
TTGTGAGTGTGGCGCCTGAATTCTGACACTCAAACATCCTAGATATCACC
AGTAAAAGTATATACGTTAGGTAGTTCCAAAGCCAAGTCGAGTTTTGTTA
GTATCTGTGTGTTCCAGGACCTCTGGCCCTCTAACGCCCTAGAAACAGCC
CATAAATGTATGTACGTAAGGTAGACACAAACCAAGGTGGATAGATGTAA
ACCATCGTGGACAACATCAACCCGTCCGTCATATCCATGAACATTCAGGT
ACGCAGGACTTGTTACCTCCTTAGTATGCGTCTGTGTGGTACCTGAATTC
TAGCACTCATGACCAATAAAAGTATACATGACAAGGTGGATAGATGTAAA
CCATCGTGGACAACATCAACCCGTCTGTCACACGAATGGTGGTATAGTAA
TCAGAACTCAAATGATGTAATTTGTTTCTGTTATATTTTGCCTGACCCCT
GCCTCTTCCCTGATGACCTCAATGAAAAGCTGCCTGTATGCCGATTTGAG
CGTCTCATGAATAAACAAAGGTTCAAATAACAAAATGAACTGGCACATTT
CTCCGTTTGGCCCTGTTCCAGACCGTAGTGGATCTGTCTGATGAGGACAA
GGACAACCCCTGGTTGGTGGTATTGTTGTAATACTGTATCTTCACGTTGT
CCCCATGTTAAATCTATATTTTGATATGTCTCAAACAAGGAATAGGGTGC
ATGGCTTCAGAAACAACTACCCGTTTTTGCCCTGTGTCAGACTGTAGTGG
ATCTGTCCGACGAGGACAAGGACAACCCCTGGCTGGTGGTGACGAAGCTA
GCCGGCGCAGATAACCTTGATCTTCGCGGGGGGTTCGCGGCCGGCCGGAG
GGGGGTCAACCACCTAGAGGACATCCGGATGGAGGTCAAGTAAGTTTTTT
TTTTTTAAATCAATTCGTAAGAGCCTGATGTTGCCATCGATTTACGAAGA
AATGCGGCTCAATTGTTACTGTAGCAGCATTTCTTCACCCTAGGTCAGAA
ATATCAATGCTCGAGACAAGTATTGACTTCACTGACCCATAAGGAGAAGC
AGGGGTTACGAAGGCTGCTCGGGGGAAATTCCTACCCCATTTAATGTACC
CAAAGTAACGAAGAGTCGCTGAAGGCTTGACAACCTCTCTCGCTCACCTT
TAAGTGGATCATATTTAATTTGTCTAATTTACTGTCTAGCCATTGTATAA
GGTTTGTTCCTGCATTTGATTTAACGTAGGCGGCCGCGGATTTCAGGAAG
AATAGTGTAGAAGTGTACGCTAATGGCGATCTGAATAAAACAAACAAACA
AACAACCAGTCAGTCAGTCAGCCAGTCTAGGATATCCTGCTGTGGCGCAG
CGGCAGGGTGTTTGGCCCGGAACCCAGAGGTCATGGGTTCAAATCTGGGG
TCCCCCGATTTGTCTCGTCGACGTTGTGCCCTTGGGAACGGCACTTAACA
CGACTTTCCCCACTTCGCTCAGGTGAAAATGAGTGCCTAGCTTCGGTTAG
GGACGTCCCTCGGATAGGCGTCCCTTGCATGGCGTATTTATGTAAGACGT
TGTTATTGCCTTGACAGGTTCTATCCCGAGTTTCTCTGGGACTACTTTGA
TCTGGACCTGAAACTGTTCATGGTCTGCATCGGGGACCAGACCGCCCAGG
ATACAGTAAGTGCAGAAACCTTTTTCATTAAGTACAAAACACTCTCTCCA
ACCCTTTTCAATCATTCCCAAGTACATGCATCATACTCTCCAAGCAGAGG
TTGCGCTGACTGTTTTTTGACGTGTTTTTAGACGTCTTTGTCGGGCTTTC
TATTTTGTCCCGGTTTTTTTTGCCATCAGTGTAGGCTGATGACAAAATAG
AAAGCCCAACAGAAACGTCTATAAAACACGTCAAAAACCAGCCAGCCCAA
CCTCTGCTGGGAGAGTATGTATCATATAGGGAGGGCACCTGCGGTAGGCC
CCACTAAAGCGTGGTGAAGTCTCATCATCATCATCATTATTCTAAAGGAT
ATATGTTGTATATATGCGTAGTTTTTCAACTTTGTAATTGTATGTGCTGT
GTTAGACGCCCAAAATCAGCTACTGCTGCCTGGGTGGTCATGTATTGCCT
GCTGCAATTTGAATAAAATAAAATCCGGTGAGGTACAATCAATAAAGTTT
TTCCATAACGATTTGTCCTTCATGGCAGTTATCAATACAGAACCTGATAG
TCCAGTGTCTCTTTCAATCAATGTCAATAAAGTAGTGTGAGGTCTTCCAA
CTCTGCGTTTTCCCTCGAAGTCTAACATCCCTTATTTTCTTGTAACCCTG
CAGGGTTGCCTGGCGGTTACCCAGGACAACCGCTACGTCGCCCACCTGGA
GGATGACTTCGCGTACCAGTATGTGGACGGCAGTGGTAGCACACAGTCCC
TCAGCATCAGTGACATCCACGTGAGTCTCATCCATCCTCCCAGCAGACCC
AATATGTTCGTTACCTCTCATAGCGGCCCTGTCCTTCCGAGCCCCTGAAC
GCGGTTCTGGCGACGTCACCACCACCAAACAGCTTTCAGCCAATCAGAGG
GTTTGCTAAAGCTCATTTTAAGTATCAGCCAATCAGCTAACGTCTTACAT
CGCTACTTAATTATTCATGAGCAGCCAACGACTTTTTGTGCCAAATAAGG
CTAGCCATTAATTATTTATGAGAAACTGTCAGTGACGTCCCCAGAACCCA
AAATCTCCGTTCAAAAGATCAGGGCTGAGACCGGGAGGGTTTGCCGACCA
TTTCCCGAATGGGTGTCGGCGCTGATAAAGGAGGGTCGTCTCATCACAAA
CCTCCAACATCTTAGGCCACACCAATCAAATTTCTTGTTTCTCTGATTTT
TAAAAGAAATTCACGGGTTGGGCAAACAAACTATGAATAGGAAAGAAGCA
AGAAATTCAATTCGCGTGGCCTGAAGGGAATTCGTGTTTCTATAACTATT
CAGGTGAAGGGCAGGCAAACTGCTGGTGGCGGCAGTAGCGAGGAAGCTGA
TCCGAATGCCGATGAGGTGATGACTGCATTCTTGCGTTCATCTGTGTTTG
GTACTAGTCTCCAACCAGACCCAATAGATTGCAAAGACCGTATGCAACTG
GAAGAAGGAGCTTGTAATGCAATCTTGGGTTGCAAAACGTACTTCCTCTG
CCAGTTTGATACGGTCTTTATGCAACCTATAGATCTGCTTGGAGATTATT
TGGTACAACTCATTATGAAGAAAGATTGCTGACAGCAAGTTCCAACACAA
AGGGTTGGGCTTAACCATTTTCACTGCACAACGCCAGTCTTTATCAAGGG
GATCAACAGAGGCAACATGCCATAAGGCCCACAACCGCGCCTGTACATAC
TTAGACAGAGGACGCCCCAAACCATCTGCTTCATTTGATCCACTGCTCAC
TGAGTCTCAATTTATCAGTCTGCATATTCCTTGAAGTTTAGGTCCTTCAG
TCTTGACTTTTTTGTATTCCAAGATCTCGACTTCATTTCTTTTTTTATTT
CACTTTTTTGACAGACAAGGACAACGTGGCACTGCACTCAAGTTTTTCAT
AACTTATTTTAACAGTGCCACGTACAGAGAACAATATGCCCATTTTTACG
CCTTGGTGGAGTTTCTTTGCTCCCTCCACTGGGATCTGTGCAGGGATGTT
CCGTCCGTATTGCGATTCATCGCCATGAATGTTTCACTTATTCTCTATTG
ATGCATGCTTCCTCAGGACTCCGAGTGGGATCCTGATAACCCCGAACAGA
GCCTCAACAGCCACGGCTACGACAGCGCCAACCACCTGTACCACATGGAC
TTCACCAACACGGCGCTGTCGTCCGAGAGAAACTCCTACACGATAACAAC
TGTGAGTCCCGTGAGCTGTGTATAGATAGTCTGTTTCCTAGCACGGCGCT
GTCGTCCGAGAGGAACTCCTACACCATAACAACAGTGAGTCCTGTGAGCT
GTGTATAGATAGTCTGTTTCCTAACTCCTACACGATAACAACGGTGAGTC
CTGTGAGCTGTGTATAGATAGTCTGTTTCCTAACACGGCGCTGTCGTCCG
AGGGGAACTCCTACACCATAACAACTGTAAGTGTTGGGAACACCATAACA
ACTGTGAGTCCCGTGAGCTGTGTATAGATAGTCTGTTTCCTAACACGGCA
CTGTCGTCCGAGAGGAACTCCTACACCATAACAACTGTGAGTCCCGTGAG
CTGTGTATAGATAGTCTGTTTCCTAACACGGCGCTGTCGTCCGAGAGGAA
CTCCTACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNACAACTGTAAGTCCTGTGAGCTGT
GTATAGATAGTCTGTTTCCTAGCACGGCGCTGTCGTCCGAGAGAAACTCC
TACACAATTACAACTGTAAGTCCTGTGAGCTGTGTATAGATAGTCTGTTT
CCTAGCACAGCGCTGTCGTCCGAGAGAAACTCCTACACGATAACAACGGT
GAGTGTTGGGAACAATATAACAACTGAATAGCAAGGTTCTTTTATTCACA
ACTCTTCTCGAGCTGTCCGGTTGATACCTTCGACGCCAGGCGGCACACTC
ATTTGTGACGCGTCTCCTTGCGTCTAGAAACAGCGTAATTCACTCCGAGG
TTTTCTCTCTGAGCAGGCACTGGCCTTACTATTGTCGATTGGTTCTCCCG
CCTGCTCGTTTCGACACTACTTGAGGCAATATTTTTGTCGTTGTTGTTAT
ATGTAGATGTCGGTAAATTGTCTTTGTTGTTTTTCAATGTGGGCCTTCGT
CCTGAGTCAAAGACTAAATAAATGAATAAAATAGATAAACAACCAAGTAT
TTTACGATACTGTATTGCCCTGATGAAGATGACAGACAGTCGTCGAAACG
TCGGCTCCTGTAAAATACTTGGTTGTGAATAAAAGAACCTTGCTATTCAG
TCATTCGCCATCCTGATGAAATTATTCATAGAATATAACAACTGTATGTG
TTGTGAACTGTGTAAAGATGGTCTGTTTCCACGTGAAAGCTAGAGGGTCC
AATCTTGAGTCACCTTTTCTCTAGCACAACTGCTATCTACCACCAAGATA
CTTCCCAAAAACTGTCATAGACTGGAACTCTTTACCATATCCAACTACTC
TAATATCAGACCCGGAAAGTTCAGGGAGGAGATCACGCAACACCTGACTG
GAACTACCAATAACATCTTATTACCTGGATATCCAACCTTCATCAACGCA
CCAATAACATCGCACTACTACCTCCTGGCGTGTGACCACAACAAAGGGGG
TTTGCCAAGTACCCAACCAGAACAAGAACCAACAAATTAAATTGGTGTGG
CCTTCTGTATCACGTTACCTATTCCCCCCGTACAGGTGTATCGCCTGGTG
GAGAAAGCAGGTAGGAAGAAGCGAGAAGCCATCGGCACATCCGACGTCAT
CCTGAACAGTCACGTGGTCAACAATGACGTGGTCAACAGTCACGTGGTCA
AGCGTGACATCATCTCCAGTGCCGAACTCCCACAAGGTACTGTGTTGTAA
AGTTGTGTTTGCAGCACCTTCAAGTTTTGTCCTTTTCCCCCCATTGACTC
AAGTATTAAGAACTTTGTCCATAGTGACCACCTGTCCACATAGACCAGAT
TTTAGCGGTCCCCTGAGTGGCCGTCTTGGGCAGTATTGACTGTTGCAGTG
TCCTAAGCTTTTACTCAAAGAAAACCAAATACCAACCCCATCCCACAGGA
AACCACATTGCGTTTGAGTTCCTCGGATGTCCCGACGGATCCGAGTACGA
CAAAGACTCCCGCCACTGCGCATGCTCGTCCGACAACCACCTGTACAGCA
GGGACACCTTCCAATGCGAGCCCGTCGCGGTCAAGTCTGACGACCGCACA
CCGACAAAGGACAGCGGAGCACCTCGCGCATGCGCCGGGCTGCTTCCTAT
GAGTTCTCTCGTTCTTATATGCATGTTGTATCGTTACTACGAATAAAGCA
TGATCTAATAAGGCTCCATGACTTATGAAATGTAGAAGAAACTGTACTTT
CCTGCCCCAACAAAGAATAGTGGATTAGCAAATGCAAGTCTGCTTCCAAT
GCGTTTTCTTGTTCTTATATGCATGTTATATCGTTACTACGAGGGGAGTG
TGATCTAGCAAGGCTCTTGGTCATACCAAGAAAGGAGATACCTCATACAT
ATGCCAATTTGCTTCTAAAAAGTTATCTTGTTCTTGCGTAGTTACTTCGA
GTTACGCTAAGTGTGATCTAGCTGAGCCTCTGTGACCTGTAGAATGCTTC
GTCTTTATGCGTAATCTGCAGGACATACCAGCAACGGAGAGACCTCATAC
ATATGCCAATCTGCGTCTAATACGTTCTCTTGTTCTTATAAACTTTGTTC
GTCTTTGTTATGAGTGAAGTAGAGTTTATCAACATGCTTTCACTTCTGAA
ATACATAAAAAAACTGTTTACTCCATGTAAAATTTCGCTCTTGAAATGTA
TATATACACTGTTTAGAACTTGCAACGGATTGAAGATCTTTATGATGAGA
ACAAAGTACAACCAAGTTGCAATAGCTTACCAAGATGTATTAGAAACTAT
TTTGTGTGAACTATTAACTTTGAAAAAATGTATGTAAAAAAACTATCTAC
AGTCTGTCACGTGTGAAATAAGTTTAAAGAAAAAAATTATATGAAAACTA
TTTGAATCTGTACGTTTGAGAGGATTTAATGATAGACATGATTGAAGACA
AATATAAACTGACTCGTGATGTATCAAACATGTGTCCAGAATCTTCTTTC
TGCGAAATGAATAGCTTGGAATGATCCTGCAGTT

Coding sequence (CDS) from alignment at Sc0000042:168396..183679-

>Blg00479.3 ID=Blg00479.3|Name=Blg00479.3|organism=Branchiostoma lanceolatum|type=CDS|length=1848bp|location=Sequence derived from alignment at Sc0000042:168396..183679- (Branchiostoma lanceolatum)
ATGCAGCGGCAGTACACCTCCCCGTGCGCCAGCTCATTCTGGAGACTCGA
CCTCTTCAGCCCGTCCTACGGATACCCCTTCCCCTTCACAGACACCGGCA
GCTTCGTGCCGACCAACGGCAGTGAGGAGGGCGGCGTGCCTCCCAAGCTG
CTGTACAACTACTACTTCAAGAGCGATCCCTACAACATCACCGACAACCG
CGGCGAGAGGGTGGAGCGGACGACCAACAGGATGCTGTTTCAGGGTTCCT
CCTACCGCCTGTTCAACTGCACGGATACCAGCGGCGGGACAGTATGGCGG
TACACCAACCAGACGGAAACAGTCGAGTTCCGCTCAACCGTCTACTTCAC
CAACATCCGCCCCATCGAAACCTCGGACCTCACAAAGGGCCACTCCTATG
TCCAGTCGCACGCGGAGCTGATCTACCGGATCTCCCGCATCGCCCTGGTG
AACGTGGTGGTCAGCAGCTCGGCGCTGGTCAAGCCGCTGCTCAACTACGT
CATCATCTCCCCTGGTTACGANATATCCCCTGGTTACGAGCCTGACGGCA
CGCCCGCCACCGACCTCGCCACGGTGGAGATACAGTTCACGACGTCCACG
CAGTCGCCTTCGGGAGAGCGGAACCACTACATCCACTCGGGAACGTCGCT
GAACTACACCGCGGACTACGTCACCCTGCACGACCTGGACGCGGTCACCA
GCTACCCCACCACCACCCCGCCCTGCGTCATCACTAACGGAGCCATCAAC
CTGTGTACTCAGACGTGGACGTTTGTGGTTATCCTGAAGATCACCCCGCG
GAATGTGGACGACGGTCTGCCGGTGGACGCGTCAGGCGTATTCACGTTCC
GGTTCGTGACGGAGCGGTGTAACGACACGACGGCTGACGAGTCCTCCGCG
AACTGCACCATCGTGGACAACATCAACCCGTCCGTCATCTCCATGAACAT
CACCATTCAGACTGTAGTGGATCTGTCCGACGAGGACAAGGACAACCCCT
GGCTGGTGGTGACGAAGCTAGCCGGCGCAGATAACCTTGATCTTCGCGGG
GGGTTCGCGGCCGGCCGGAGGGGGGTCAACCACCTAGAGGACATCCGGAT
GGAGGTCAAGTTCTATCCCGAGTTTCTCTGGGACTACTTTGATCTGGACC
TGAAACTGTTCATGGTCTGCATCGGGGACCAGACCGCCCAGGATACAGGT
TGCCTGGCGGTTACCCAGGACAACCGCTACGTCGCCCACCTGGAGGATGA
CTTCGCGTACCAGTATGTGGACGGCAGTGGTAGCACACAGTCCCTCAGCA
TCAGTGACATCCACGACTCCGAGTGGGATCCTGATAACCCCGAACAGAGC
CTCAACAGCCACGGCTACGACAGCGCCAACCACCTGTACCACATGGACTT
CACCAACACGGCGCTGTCGTCCGAGAGAAACTCCTACACGATAACAACTG
TGTATCGCCTGGTGGAGAAAGCAGGTAGGAAGAAGCGAGAAGCCATCGGC
ACATCCGACGTCATCCTGAACAGTCACGTGGTCAACAATGACGTGGTCAA
CAGTCACGTGGTCAAGCGTGACATCATCTCCAGTGCCGAACTCCCACAAG
GAAACCACATTGCGTTTGAGTTCCTCGGATGTCCCGACGGATCCGAGTAC
GACAAAGACTCCCGCCACTGCGCATGCTCGTCCGACAACCACCTGTACAG
CAGGGACACCTTCCAATGCGAGCCCGTCGCGGTCAAGTCTGACGACCGCA
CACCGACAAAGGACAGCGGAGCACCTCGCGCATGCGCCGGGCTGCTTCCT
ATGAGTTCTCTCGTTCTTATATGCATGTTGTATCGTTACTACGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00479.3Blg00479.3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00479.3-exon-Sc0000042-1570713199:183291..183679Blg00479.3-exon-Sc0000042-1570713199:183291..183679Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:181676..181875Blg00479.3-exon-Sc0000042-1570713199:181676..181875Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:180688..180824Blg00479.3-exon-Sc0000042-1570713199:180688..180824Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:180053..180195Blg00479.3-exon-Sc0000042-1570713199:180053..180195Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:179080..179277Blg00479.3-exon-Sc0000042-1570713199:179080..179277Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:178716..178879Blg00479.3-exon-Sc0000042-1570713199:178716..178879Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:178077..178162Blg00479.3-exon-Sc0000042-1570713199:178077..178162Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:177002..177126Blg00479.3-exon-Sc0000042-1570713199:177002..177126Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:176091..176239Blg00479.3-exon-Sc0000042-1570713199:176091..176239Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:175325..175412Blg00479.3-exon-Sc0000042-1570713199:175325..175412Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:174560..174676Blg00479.3-exon-Sc0000042-1570713199:174560..174676Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:173129..173263Blg00479.3-exon-Sc0000042-1570713199:173129..173263Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:169694..169844Blg00479.3-exon-Sc0000042-1570713199:169694..169844Branchiostoma lanceolatumexon
Blg00479.3-exon-Sc0000042-1570713199:168396..169481Blg00479.3-exon-Sc0000042-1570713199:168396..169481Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:168396..183679 -
Properties
Property NameValue
GeneIDBlg00479