Blg00477.0 (mRNA) - B. lanceolatum

Overview
NameBlg00477.0
Unique NameBlg00477.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000042:833722..837809-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00477.0 ID=Blg00477.0|Name=Blg00477.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4088bp|location=Sequence derived from alignment at Sc0000042:833722..837809- (Branchiostoma lanceolatum)
TACAAACTTCATGAACGGCAATTGTAGCTAAAACAGTGTTTTGACATGCG CACTAGCGACAATGTAACAGATACAGCGAAAGGTCAAGGGCATATTGCAC ACATTGCGGAGACAAACAACGAAACGTCACTTCCGGTTTCCACCGACGCC ATTACTATTTGAGCTTGTATTCAAGGCTTGCTGGTGACGAAAGCAGTGCT GAAAATGTCCAGTTCTGACATCGTGCGAGCGACAGAGCGGCTTTACCATA TAGACGGGAGGTTTGAGGTGTCCGGTCTCGAAGAACTTACCTCTGTGCAG ACAGATTACGTGCGAGAACTTAAGAGAGCTATGGCGGAAGAGGACCTCAT GATCGAGGTTGAAGCCCTTAAGAGTCTCGGTGACGTGTTCCTAGAAAAGG GAAAAATCAGCGGCGTCTTGGCGGAGTTCGGCAAGGCCCACTCCTTGTAC AGCGTCGCACTGGCCAGGTGTACTCACATCGGGGAAGTGCAGACCCTACT ACATCGCGTAGAATATGCACGAGCGTTCATCGACAAGACAACACCCCAAA ACCAACATGGCAACAGGAACAAGCCAAACAAGGAAGTGAATCGGGAACAG GAACAACATTCAGATCTAAAGGTGTCGCCGTCGGATCGGTTAAAGATTGC CGAGACAGTTCAAACAAGAGTAGCAGACCTAACAGAAGAATCGTTACCAG CCAGCTATGTTAACTTGCTGGTAGAAAGTGCTGTGGCGTCGGACGTGTTG GCGGAAGTGGAGGCGCTGAAGGGCCTGGGTGACGCGTGCCTGAGGCGGGG AGGCGTGAGCAGGGACATGGCGGATTTCACCCGGGCGTCTGCGCTGTACT CCGCCGGCCTCGCGCGGTGTCAGGACGCAGACAACAGGGACGCTCTCCGA CACCGGGTCAGGTATACGGCAAAACTCAGGAAGGAGGAAATTAAGGTTCT TTTTTTTTTTTTTAAATTAACGTAAGCTTTTCGTGTGCTCCATGACTGTT CCTTTGTGCATATCTCACGGTCACAGTTTGAGTCATAAATTATTCATTAC GGGGATAACATTAAATGGTGCGTTACAAACCTTATATCGTGCCCTCACTG AACTGAAACTGAATATTATAGAAAGAGACCATGTTGGTACTGAAGTATAG AGGGTGACAATGTCCACATGGTATCCACCGTATGTTTTGCTGTAGTAATA AGCGACATTTGCTTGTTGTGAATATGGATTGAAGAACACCTATTCTACTG CTACTGACCCGAATTGTGCTATATTCCTTCAGGGAAAACATAAAAGCTAC GAAGGCAAAGCAATTGAAGTCCAGTATAAATATCCTAGCGACATAGACAG CGATGATGAAGAAGAGTTGGCCCAAAGTGAGTCGAATGAACAGAGTGCAG AAAGGTAGGCTCCTGTTACGTTTCTTGGTCTTCTTGTAGAGAGGCAGGCT GGGACCGGGTGGCGGGTTTTACTGGTTTAATTTGTAGGATCAGTGCAGGG TCTGACATGCTCTACTGTTCAACCCAGGAACAGCAAAAGTTCGAAGTCCT CTATGAAATACTGTAAGTATGCAAATAACCTATTCATTTACATAATCTAT TCATGGTACAAATTATAATAGCTCACACATGTCACAAGTATGAAATTACT ATACTCTACGACGAATTTTGACGCAAGCAAACAAACAAAAAAAACAAAAA CAAACAAACAAACAGGCCAAAAACAATACTTCCATCTTTCATGGGGGTGA TATAAAAGTCAAGGATGCATTTTAGTGGTCATCCGTGCTCTTAAAGTACC CATGACAAGATAAGAGAGGCCAACTGAAATCAAACGAAGATTATACTTAA ATCTTGTATGCCGTTCCAGCTCTTACGAAGATCAGTGTGAAGCCGGTGTC AGTGGCCTGAGGAGCGGTTCTCTGGAGTCAGCAGAACGAAACTTCGCTTT GGCACTCAGACTTGTTCACGGTAAGGTCGTTTTGCAAATTTGTTGCATAT CTCCGAAAATAGAATAATCTCATTAGGTTGGTAGAAAATAGGACATTGGA GCTTTCTTTTCACACAACCAGTATTATGTTTCACCTGCTGATGCTTCTGT GTCTCTCAGACACCTTCCTCAGAGCTTCCGACTGGAGTACTGCTTGTAGC GTCGAGAAGCAGTGCTCCAGTCAGAAGCTGAGAGTCTGAGAGACACAGAA ACGTCAGCAGGTGAGACATTACTGGCTGTGTGCAAAAAGAATACTCCAAT GTCCTTGTTGGATATTTATGTACTATTACATGAACAGAAATAATGATGAA GAAAGACAAATGAAAGGTTGCATCACCAAGGTTTGAATTGATATCATGTG TGTGCACCAAAAGTATGCAATGGTGAGAAACTTAGACCTCTAGTTCATGA TCATTTTTCTTAGCTTCCTAGTCATGACGCCATCATTTGTCAATGTCGTA GTAGAAATCAATGGCATGGACAACAATGGTAAAAGGAAAAGGTCACATTG AATTCTTGTACATAATACGTACTGAGCCCATAGTTTTGCATTTTTTCAGG AAACCAAGAGGAGATGGCAAAAGAGGTTTCGTGTCTATGTCGGCTGGGTG ACGTCCACGTAGCGAAGGGTAAGAACACAGGAGACGGAAAATGCTTTAGC CAAGCTGCAGCTCTGTACAATGGCGCACTGGTCAGGACAGACGATGCGAC GGTCAAACGTGAAGTACACGAGAAACTGAAAGACACGGAAGCATCCTTCC TCCAGCATGTAGTTCACACCGACCGTAGACCTAGTCTGAGTGACGTCGAC AGGGGACATAAGGACGCGATACAGAACATGCGGGAAAAGGTTAGACAGAG ACTGGAGTCGATTGACCAACAGTTTAACCTCCAAGCACATCGGGAAGATC ATCGTGCAATGACGACCGTAGAAGCGCACAGAGCAGACGCCATCAAAGAC TTGTTCGTTGAAATAGCTCAGAGTAGAAAAGCGTTTGTCGGTGTCCTTGT TGGTGAATGTAAGGAAGTTCTAGGTCCTGCTCCCTGTAAATATGCAGTCA TAGGTTTGGGCTCACAGGCAACAGAAACCGCCACTCCGTACTCTGACCTG GAATTCGCCATCTTGTTGGACGAAGGTTGCGACACCGATAAAAACAAGCA GTACTTCCGACTCCTCACTCACTACGTACATCTCAAAGTCATCAACCTCG GAGAAACTATCATCCCGGCGATGGCCATCAAGTCCCTCAATGATTTCGAG TCGGACAATCCTGCGGACAACTGGTTCTATGACTCGGCGACTCCTCGCGG GTTTGCCTTTGACGGCGCCATGCCGTGGGCCAGTAAAACACCACTCGGCA GAGACAAGACCAAGGCGAGGCCGGCACTTGAGCTGATTCGCAGCCCGAGC AGCATGGCTGAACTGCAGCAAGAGAACATCGCCGTGTCCGAGGGATACCA CTTGTCCGACATACTACGGGACGTGTGCTGCCTAACAGGCGATTATGGTC TTGTAGAAGAGTACATGAAGATTGTGAATGAAACATTGACAAGCTCTCAT ACAAAGGGAGGCAGTGGCGTTGTCCGAGTCAGAGACACGCTGGCTAAAAA CGTTGAACATTACGGACAGCAAGGACTGTCGGCAAAGCTGCTCGACGTCA AAAATGATCTCTACCGGTTTCCTACGACCTCGATAGACAGTCTGTGCATA TTATTTGGACTGAAACCGGGAAGCATTTGGAAAGTTATATCAGACATGGT GGAATCACACATACCGACAAGAGAAAACGCCGATCATCTGAAGGTGTTGG TCAGCATATCCGCGGAGCTCCGGCTGAGAACGTATCTGGCCAACGGGAAA CAATGGGAAACCATGTCTGCTCTATCTCCAATATTAATAGCAACGGATGG ACGGACAGGTGACCACGATGCAGCGTTCAAGTCAGTGTTCTACCTTCCTG ACGATGATATGCTGTTCAGATATCATTACAGGGCGATACCACTGGAGAAG TTACTGTCAAGTATTTCAATTGACCACTTATCCGAATCACTACGCAGACT GCGTTCAACGACTCTCTTTGATGCAACCCCTAGCGTAA

Coding sequence (CDS) from alignment at Sc0000042:833722..837809-

>Blg00477.0 ID=Blg00477.0|Name=Blg00477.0|organism=Branchiostoma lanceolatum|type=CDS|length=1953bp|location=Sequence derived from alignment at Sc0000042:833722..837809- (Branchiostoma lanceolatum)
ATGTCCAGTTCTGACATCGTGCGAGCGACAGAGCGGCTTTACCATATAGA
CGGGAGGTTTGAGGTGTCCGGTCTCGAAGAACTTACCTCTGTGCAGACAG
ATTACGTGCGAGAACTTAAGAGAGCTATGGCGGAAGAGGACCTCATGATC
GAGGTTGAAGCCCTTAAGAGTCTCGGTGACGTGTTCCTAGAAAAGGGAAA
AATCAGCGGCGTCTTGGCGGAGTTCGGCAAGGCCCACTCCTTGTACAGCG
TCGCACTGGCCAGGTGTACTCACATCGGGGAAGTGCAGACCCTACTACAT
CGCGTAGAATATGCACGAGCGTTCATCGACAAGACAACACCCCAAAACCA
ACATGGCAACAGGAACAAGCCAAACAAGGAAGTGAATCGGGAACAGGAAC
AACATTCAGATCTAAAGGTGTCGCCGTCGGATCGGTTAAAGATTGCCGAG
ACAGTTCAAACAAGAGTAGCAGACCTAACAGAAGAATCGTTACCAGCCAG
CTATGTTAACTTGCTGGTAGAAAGTGCTGTGGCGTCGGACGTGTTGGCGG
AAGTGGAGGCGCTGAAGGGCCTGGGTGACGCGTGCCTGAGGCGGGGAGGC
GTGAGCAGGGACATGGCGGATTTCACCCGGGCGTCTGCGCTGTACTCCGC
CGGCCTCGCGCGGTGTCAGGACGCAGACAACAGGGACGCTCTCCGACACC
GGGTCAGCTCTTACGAAGATCAGTGTGAAGCCGGTGTCAGTGGCCTGAGG
AGCGGTTCTCTGGAGTCAGCAGAACGAAACTTCGCTTTGGCACTCAGACT
TGTTCACGGAAACCAAGAGGAGATGGCAAAAGAGGTTTCGTGTCTATGTC
GGCTGGGTGACGTCCACGTAGCGAAGGGTAAGAACACAGGAGACGGAAAA
TGCTTTAGCCAAGCTGCAGCTCTGTACAATGGCGCACTGGTCAGGACAGA
CGATGCGACGGTCAAACGTGAAGTACACGAGAAACTGAAAGACACGGAAG
CATCCTTCCTCCAGCATGTAGTTCACACCGACCGTAGACCTAGTCTGAGT
GACGTCGACAGGGGACATAAGGACGCGATACAGAACATGCGGGAAAAGGT
TAGACAGAGACTGGAGTCGATTGACCAACAGTTTAACCTCCAAGCACATC
GGGAAGATCATCGTGCAATGACGACCGTAGAAGCGCACAGAGCAGACGCC
ATCAAAGACTTGTTCGTTGAAATAGCTCAGAGTAGAAAAGCGTTTGTCGG
TGTCCTTGTTGGTGAATGTAAGGAAGTTCTAGGTCCTGCTCCCTGTAAAT
ATGCAGTCATAGGTTTGGGCTCACAGGCAACAGAAACCGCCACTCCGTAC
TCTGACCTGGAATTCGCCATCTTGTTGGACGAAGGTTGCGACACCGATAA
AAACAAGCAGTACTTCCGACTCCTCACTCACTACGTACATCTCAAAGTCA
TCAACCTCGGAGAAACTATCATCCCGGCGATGGCCATCAAGTCCCTCAAT
GATTTCGAGTCGGACAATCCTGCGGACAACTGGTTCTATGACTCGGCGAC
TCCTCGCGGGTTTGCCTTTGACGGCGCCATGCCGTGGGCCAGTAAAACAC
CACTCGGCAGAGACAAGACCAAGGCGAGGCCGGCACTTGAGCTGATTCGC
AGCCCGAGCAGCATGGCTGAACTGCAGCAAGAGAACATCGCCGTGTCCGA
GGGATACCACTTGTCCGACATACTACGGGACGTGTGCTGCCTAACAGGCG
ATTATGGTCTTGTAGAAGAGTACATGAAGATTGTGAATGAAACATTGACA
AGCTCTCATACAAAGGGAGGCAGTGGCGTTGTCCGAGTCAGAGACACGCT
GGCTAAAAACGTTGAACATTACGGACAGCAAGGACTGTCGGCAAAGCTGC
TCGACGTCAAAAATGATCTCTACCGGTTTCCTACGACCTCGATAGACACG
TAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00477.0Blg00477.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00477.0-exon-Sc0000042-1570713199:836899..837809Blg00477.0-exon-Sc0000042-1570713199:836899..837809Branchiostoma lanceolatumexon
Blg00477.0-exon-Sc0000042-1570713199:835840..835940Blg00477.0-exon-Sc0000042-1570713199:835840..835940Branchiostoma lanceolatumexon
Blg00477.0-exon-Sc0000042-1570713199:834121..835260Blg00477.0-exon-Sc0000042-1570713199:834121..835260Branchiostoma lanceolatumexon
Blg00477.0-exon-Sc0000042-1570713199:833722..833726Blg00477.0-exon-Sc0000042-1570713199:833722..833726Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000042genomeSc0000042:833722..837809 -
Properties
Property NameValue
GeneIDBlg00477