Blg00462.0 (mRNA) - B. lanceolatum

Overview
NameBlg00462.0
Unique NameBlg00462.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0003367:32..1797-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00462.0 ID=Blg00462.0|Name=Blg00462.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1766bp|location=Sequence derived from alignment at xfSc0003367:32..1797- (Branchiostoma lanceolatum)
TCTTGCTTTTTCAGGCCTGGGCATGAGATGTGGAGTCTGCAGAGGATGTG ATCCATAAAATTCACTTGCTACATGTATGTTCTTAAAGTACAGTAGTTGG AATGTGATGATTTGTGACCCTCTCCCCCAGATGACAAGCGGCCCGTGGAC CAGACCAACATCCCGTCTCACCTGGAGCAGATGTTAGAGATCCTGATCCA GGAGGAGGAGGAGCGTGGGGAGGCAGGGCCGTGCATGGAGTATCTCATGC AGCATAAACTCCTGGAGACCTTACACACTCTGGGCAGGGCAGATGTGAGT ATCTCAGGAATTCACACCTTTTGAAATTGTCTCTGTTCCTCTTCTTTTAC AAGTCTCAGTAGCCAATCTTGCTTTAAACAAGGTTAACCTTCTTGCTTTA ATTAAAGAAGGGGAATGCTGTAAAATCCTTCCATTGACTGTAACTTGAAA TGATCACATGGTAATAGTATGCTGTTAGTTTGATATTCAGAATTTTTTAA AGCTTTTTTCATACCTGTCTTTTGCTAATTGTTTGTGACTCTGAAGCAGG TACTATAAATCCAGTGTTTCTCTTACACAGTGCCCACCTGGAATGAAGCA GGAGGTTTTGGTGTTCTTCACAAAACTTCTGGGGAAAATCCAGCAGCCGA TCCTGCCGCATGTCAATGTGCACAGACCAGTCCACGTGAGCTCTAACTTA CAAATGTACTGGGTTACAGGGGAGGGGACAGTGAATGTGTTCATTGTCGT ATATAGATACAGTACTTCTGATTACAGGTCTCAAAATATCCCTGGGACGT AAAACTTGAGTTGGGGAAAGGATGATTTCACTGCTATGTAGTCATAAAAG TAAAAAGCATGTATGATAATACAAAAGAGCTAAACGGTGTAATGTTACTA AAATGTGTGTTTTTCAATTTTGTTTCCCTCCATCCAGAGGCTGATCCGTG TGTGTGGTGAAGTGCAGGCGGCTCCAACAGAAAATGAGGAAATCCAGTTT TTATGCACATTGTGTGCCAAGCTGAAGGACAACCCGTACCTAGTCAACTT CTTCCTACAGGTGTGATTTCTTCTTTTACACCATGACTATTTTATGTCAT GAATTCATTCTAGCTGGACTAGGTAATATTAAGTTAACTGATCTTTTGCA TTGATGCATATGACTTGAAGGTTTGGGTAAACTCCATGAAAAATGGAGGC ATTGTTTTTTTATTACTGTTATCTGTACATCTATGTCCAAGTTAACTATC AGTATCAGTTTTCTGAACTCCCAGGACTTGATAAAACCTTGAAGTTTTTG ACACACATAGAAAGCTAAAAGTTCATTTGGTCAGTTGCATTGTACAGTTA ACCATGTTTATATTTGGTTGTTTTTCTGGCCAAAAGTTCAATCCCAGAAA AATGTGGTTTCAAGTTTGTGTTTACTCAGTTATTGAACAGTACAAGCATA GAGATGTTATGAGTGAAGCCTTTGATCAATTTCTTCTTGTTTTCAGTTTG AATAATTTTTTTTCAATCTTGATGTGTTTGGTTTTCTTGTCCATATCCAA TCCTTACCATCTGTTTATTTTCCTGTTCTATCTCCCTCCTGTTCTTCTCT CCTTCCTTCCTTTTTACCAGAGAGACTGGTGGGCTCGTACCAGATCTGTA AGTCAAGGGTCAGAGGTCATGACATTTGTAGCCTTGTTCTAGCTTGCTAA GACAGTCGAACCGCAGGTCATCGTAGAACGCTTTATTTTCTTTTTTACGG CGTCGGGCGGGTCCCG

Coding sequence (CDS) from alignment at xfSc0003367:32..1797-

>Blg00462.0 ID=Blg00462.0|Name=Blg00462.0|organism=Branchiostoma lanceolatum|type=CDS|length=414bp|location=Sequence derived from alignment at xfSc0003367:32..1797- (Branchiostoma lanceolatum)
ATGTTAGAGATCCTGATCCAGGAGGAGGAGGAGCGTGGGGAGGCAGGGCC
GTGCATGGAGTATCTCATGCAGCATAAACTCCTGGAGACCTTACACACTC
TGGGCAGGGCAGATTGCCCACCTGGAATGAAGCAGGAGGTTTTGGTGTTC
TTCACAAAACTTCTGGGGAAAATCCAGCAGCCGATCCTGCCGCATGTCAA
TGTGCACAGACCAGTCCACAGGCTGATCCGTGTGTGTGGTGAAGTGCAGG
CGGCTCCAACAGAAAATGAGGAAATCCAGTTTTTATGCACATTGTGTGCC
AAGCTGAAGGACAACCCGTACCTAGTCAACTTCTTCCTACAGAGAGACTG
GTGGGCTCGTACCAGATCTGTAAGTCAAGGGTCAGAGGTCATGACATTTG
TAGCCTTGTTCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00462.0Blg00462.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00462.0-exon-xfSc0003367-1570713199:1504..1797Blg00462.0-exon-xfSc0003367-1570713199:1504..1797Branchiostoma lanceolatumexon
Blg00462.0-exon-xfSc0003367-1570713199:1113..1217Blg00462.0-exon-xfSc0003367-1570713199:1113..1217Branchiostoma lanceolatumexon
Blg00462.0-exon-xfSc0003367-1570713199:738..860Blg00462.0-exon-xfSc0003367-1570713199:738..860Branchiostoma lanceolatumexon
Blg00462.0-exon-xfSc0003367-1570713199:32..177Blg00462.0-exon-xfSc0003367-1570713199:32..177Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0003367genomexfSc0003367:32..1797 -
Properties
Property NameValue
GeneIDBlg00462