Blg00454.0 (mRNA) - B. lanceolatum

Overview
NameBlg00454.0
Unique NameBlg00454.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:756465..762366-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00454.0 ID=Blg00454.0|Name=Blg00454.0|organism=Branchiostoma lanceolatum|type=mRNA|length=5902bp|location=Sequence derived from alignment at Sc0000078:756465..762366- (Branchiostoma lanceolatum)
ATGGTCTGTAAGTTTTTATCCGCCTATTTAACGCCGTGCGAGCATGTATT TATACTGAGGTATATGACGAAGAATTCTGCTAGGGTAACCCATTATCGCC CACTTCATCTTTTCCTTTCTAGCGCTATGCTTGAAGAACATAGACCAGAA AAAAATGCACATTAACTGTCCAAAGTAGTCTGCAGACAAATGATAGTAAA AGCACTATATCTGTCCCACCACTTGCTTGACGCGATGGAGAAAACAGGTG TTTATTTGTGAATTTCCCCGACATGCGCGGCACGTGGCGTTCACGTGGTA AACGCATGGCAATTATGCTTTGTCGTGCAAAAATTAGCCTCCGGTGCGGG GGTCGCTAGGTTGTATCAAACCTTCCTAAAACTGGTAAGAGTTTCAACCT CGAATCACCTTGGATAGTCTGAATATCAAAGAAAGGTTTAACGTCAGACT TTTAAAAGATACTAGCTATCGTGCAAGTTCCAAAAACATGATGAAGTACG CGGTGTCGAATTACATATGAAATACGTTATGCGTGACGCTTCCCTGCAAC TTGTTGTTACTGGTTCAGGAGTTTATTCTGTTATGTCCCTGGACGTAAAC CTTTTTTAATTGTCTTGTATGATAGAGAGAGATGGCTAAGGATCATACTT ATGACATTCTTTATTGCTCATGAGAACAGGCTTTGGCATAATACACCGCG ACATGTGGACATGAGCCAAACCGGACGTAAATAGGTTCTGCACGTAAATA GGTTATGTTACGTTAGGTCCTCATATGATTCAGATCTAGTAAGTACAGTA CATGTACAATCAAAAACAGTGTTAATTATTTTGAAGTTTTCATACATCCT ACATGTTTTTACGATGACCGACGCTAGGAATAGCTACGAATCAATGCTGT ACTCTTCTCTTCAATATCTAGGCAGCTGTGGAGGCAGCTCGCAAGACGCT GCAGTGCGGTGAAGGTGACCCTAACCTACGCGAGTGCAGTCCTGATGAAA AACATAACATCTTTAAACAAGCAGCTCGGGATATCAAAACACCAGTACCC CACACCTGTCGTGAAGAGCCACAGGATCTGTTGAGTTGCTCCGATGGTGA AAACATGAGTGTGGTGACGTCCACCGGTCAGTTCACCAGTGGTCAGACCC CTGAAGGTGACCGCTCCGTCTTGATCCACTGTGAAGAGCCACAGTCCAGC CAATGCGTCACTTCCCTTGTAGAAGGGGATACAAAGTCTGAAAGTCCTGA AACACTGGATCTGGTAACTACTACTGACAGCCAAGAACAACCACTGCCTT GCCTTCCATTAGAGTGCCAGTCACCTGTGAACACACCAAAGTCATCCTCA CCAGCAGCTGAGGTGTTGTTGACACCAGTTTATGATGATGCCTGTGCACA CCATCCTGACCATCCCAGCTGTGCTGAGGAGCCACCACCCCCGAAGTGCA CATCTGTGGCGTTTCGCGCCAAGCACAGCCGGCGACACGTGCCGTGCTAC ATCTGCCAGTCCCCCGCGGGCACGCCACCGTCCATTCCGAGACTGGCGGT AGAGGGATTGTGGGTTCACGAAGATGTACAAAGCCTTGCCAAGAGAACTA AAGAAGAGGACATCGCAGACTGGGCCAATGGTATGTGTGGCACTAGTGAA GATGTCCAAGGTATTGCCAAGAAAGTTGACGAGGAAGACACAGAAGACTT TGTCAATGAAACTTGCGGAGACCAGAAGACACCTTCTGCAATGTTGCACC AAAATATCCAAGGTCTAGGCAAGAAAATTGAAAAGGAAGAGATAGAAGAC TTTGTCAAAAGGGACCAATCTACACCTACCAAGTTGATGTACCAAGATCA AGATCTCCAAGGAATTTCAAAGGAAGTTAACAAGGAAGACCCACAAGACT TCAGCATCAGCAAGATATGTGGTGACCGAGATACACCTACCACACCAACC CACAAAGGTGAAGATGTAGATGATCCTGCCTTGGTCAAGGTCAAAGAAAA CCCACAAGACTTGGTCCAAACAACAACCGCCTCATTATCGCAACAAGATG TCCAGGGTCTTGGAAAGGAAGAGCAAGACACCTCAGTCATCACGTGCATG TGTGGAGCCTCTCATCAAATGGTTCCTACCACACTGACGGGTCAAGATGA AGACATCCAAGCCAAGACAGTTGATAAGGAAGACCAAGGAAGCCTGGCTA CTGGTATGTGTAGTGCCTCTGACATGTCTGACTATCCTGCCACATTAGTG CCCCCAGTTGAAGAGATATAATGTCATCATTCTTTGAGAATTCTTTGAGG ATTCTTAAAACCAGAGTAAAACTTGCCATTTTCATGGCTTCTTCTTCTTC TCGTGTCACCACTTCTGCTACACGCTCCCTCTCCAATATTCCGCCACTGC AAGTCCTCTTGGGGTCAGGGCTTCAAGGTCCTCTCTGGTGCATGGCTCAG GTAGGAGGGGGCAGACAAGGAGGTGTTCCATAGTCTGCTCCTGCCCGCAG TCACATGCCGTCTGTCCATCTGGACTGAGACCCCACTTATATGTAGACAT TTTCATGGCTGAACAATGTTTTACTTGAATGAAATCAGCTGCTCACAAAT AAGCTGCTCAAGTACAAATAATTCACGAGTTTAAGTGTCTAAACATTATG TTCTACAATATGTTATCGTTTCAGAGAAAGACTCGAAGGCCCAGACCGAT GAGCCTAAACAGCGGGGAGGCAAGTGGTGGGATTTGAGGATAAAGAGAGA GAGGATGGCCAGGGACAGGACAGATGGCATCAACAATGGTGAGTAGTCTC AATCCCATACAAGAATGAATACTAGTACTTTGATTTGATTCCATTCTATA TTTTCTGCTTTAATCATAGGGAATTTGTTTCTTTGCAGTGATACATGCTT GACCAAGGCGATTTTGTAAATGTAGTCAATAGAACATTTTTGCATGGGGG AGAAATGCAGAGTGATATATTTTACATTTGCTTGCAAATGTTGGCTTTCT TTCTAACAGTTTTCTGTCCTTTCAGACAAAAAGGATGCAAAGGAAGGAAG GAAGTGGTGGAGAAGAGTTTTCACTAGGAAGAGTGGCGGAAAGAAAAGGG GCAGTGACAGTGGTGAGTAGAATTGCCTATGCATAATGATCAGTATTAAT ATGTGTGACAAAGACGGATTATACTTGTGCATTGTATTTCGATACATGCT TGTACAAGGTGATTTTGTAATTGTAGTCAATAGAACATTTTTGCATGGGG GAGAAATGCAGAGTGACATATCTTACATTTGCTTGCAAATGTTGGCTTTC TTTCTAACAGTTTTCTGTACTTTCAGACAAAAAGGATGCAAAGGAAGGAA GGAAGTGGTGGAGAAGAGTTTTCACTAGGAAGAGTGGTGGAAAGACAAGG GGCAGTGACAGTGGTGAGTAGAATTGCCTATGCATAGGCTACATGTTTTT GTGTTATGATTTTATATGTTGTACACCTGTGTCGCGTATGTTTGTGTAGA TGGTGTGTTCAGCACCAAGGACAGGGTTGTGTTCAGATTATTTTGTGTAC CAGTGACCTGTGTAGATGGTATATTCAGCACCGTGGACAGGTTTAGAGTA CAGATTGGGCTCTGCACCGGTAGACTGTATGTTTGGGAAGATGGTATGTT CAGCACCAAGGACAGAATTGTGTACAGATTGTGTTGTGCATCGGTGTCCT GTATGTTTGTGGAGATGTTGTGTTCAGCAACAAAGACACATCTAAGTACA TACTTTGCTGTGCACCAGTGACTAGGCAGTGACCTGTACGTTTGTGTAGA TAGTGTGTTCAGCCCAATGGACATGTAAAATAAACAAGTAACAAACATGA TCGTAACCGCTCCTACTTGTTGCCAAATTACTTCAGGACTTGATCCCAGC ACGATTTGTCTTGTAAGATGACATATTTCTCAAACATTCTTTATTATGTT TTCTTATAGAAAAGAGGAGAGGATGGTACATCTGTTGCATGTGAAGAGGA CAACTTGTAATCCATTTTACTTGGATGATTGATGATTTGTTTATGAGTTG AGACTGATATATTTTTGTATAGAGATTTTAAAGCTTCTAAAACTATGTGC ATAAATGACGGTCGATTGTTCTGTATTGCATTTGCAATACTGATGGCACA GTGTCAGATACAATGTGTCCATCGCAAAATAAAATGTTGATCAAAGAATC ATGGTGTTGTTATTTCTCGGCAACAGATGCTGTGTACATAGGTGTTGTAT ATATTTCCCCGCCATTCCTTATGAAAAGACCAAAATTTAATCAAAGCATT TTTTGGTTTAAGACAAATTGACAACAGTCTGTACAGAGACTATCTTTACA CTAAAAACTATACTAAAAACTAAACACTCTATTTTGAGCCAAAACGTATA TTTTGAGCCAAAGTACAGTGCACTCAAAGTCATATCAACTAGACTTTCGT ATGATAATCTTAGCACTGAAGGCTAAGCACACGGCACCAGAAACCTTAGA GAGGGATCGGTCAAAGCAGGGCTTGATTTGCAATATCAATAAGAAAATGT TATATAATGTAAAGTCCCAATCATAAAAGCCCTATACTATTACAGAAGGC TAATAAAGCTTTTTCTTACTGGTAATGCAAGTTGAGCTCTGATTCGCCCA ATCTATCTCTAAGGTTTTTGGTGTCGTTTGTTGAAAAGTTAGATTATGGA CCACTTAGCGGCTTTCCCTGGTACAATAGCAGACCTTTCGGTTTTCATAT CTCGTGTCCAGGACATGCTATGGCAGGAATTCGCCCTTGGGCTCTTGTTT ATATGTTTGAGCCCCCTAACAGCTATGAATGCAAACACATGGTTCATGTC ACATGCAATATTTTTAGGCCTCTTAAAAGGAGCTCTCGAGAACCAAGGGA TTAGAAACACCCTGTGCCAAGTTTTTGCCAGCTCCAGGCACTGTGAATAC ATACACATGGATCACGTCACTTTCAAGAAAAAATGTCTACCTCTATATAT GGGGGTGCTCTACAGTTTTGCAGCTCCACGCGCTATGAAAGAATACACAT GCTTCATGACGTTTAGGGAAAAAATAGATGTAGACTATGGAGGATCTCTT CAGACTGGCTAGCACTCTTTTCCAGCTCTATTTACTATGAACGGCCTGTT CTAAGGAGAACAAAGACGACAACCAGGGTCTTACAACACCGCACATCCCT TCGCAGGAAAAAGACGACGACCGGGGTCTTAAAACACAGACCTGCTGTTC TAAGGAGAACAAAGACGACGACCGGGGTCTTAAAACACAGCCCTGCTGTT CTAAGGAGAACAAAGACGACGACCAGGGTCTTACAACACCGCACATCCTT TCTCAGGAAAAAGACGATGACCGGATTCTTAAAACACAGCCCATCTGTTC TAAGGAGAACAAAGACGACAACCAGGGTCTTGCAACACCAGACACCTGTA CTAGGGAGAACAAAGACGACGACCAGGGTCTTAAAACACAGCACACCTGT TCTAAGGAGAACAAAGACGACGACCAGGGTCTTACAACACCGCACATCCC TTCTCAGGAAAAAGACGACGGCCAGGGTCTTAAAACACAGCCCATCTGTT CTAATGAGAAGAAAAACGACGGCCAGGGTCTTAAAACACAGCCCATCTGT TCTAAGGAGAACAAAGACGACGACCAGGGTCTTAAAACACAGCCAATCTG TTGTAAGGAGAACAAAGACGACGACCAGGGTCTTGCAACACCAGACACCT GTTCTGAGGAGAACGAAGACGACGAACAGGGTCTTACAACACCGCACATC CCTTCTCAGGAAAAAGACAACGACCAGCCCATCTGTTCTAAGGAGAAGAA AGATGACGACCAGGGTCTTATAACACAGCACACCTGTTCCAAGGAGAAAT AA

Coding sequence (CDS) from alignment at Sc0000078:756465..762366-

>Blg00454.0 ID=Blg00454.0|Name=Blg00454.0|organism=Branchiostoma lanceolatum|type=CDS|length=2175bp|location=Sequence derived from alignment at Sc0000078:756465..762366- (Branchiostoma lanceolatum)
ATGGTCTCTGTGGAGGCAGCTCGCAAGACGCTGCAGTGCGGTGAAGGTGA
CCCTAACCTACGCGAGTGCAGTCCTGATGAAAAACATAACATCTTTAAAC
AAGCAGCTCGGGATATCAAAACACCAGTACCCCACACCTGTCGTGAAGAG
CCACAGGATCTGTTGAGTTGCTCCGATGGTGAAAACATGAGTGTGGTGAC
GTCCACCGGTCAGTTCACCAGTGGTCAGACCCCTGAAGCTGAGGTGTTGT
TGACACCAGTTTATGATGATGCCTGTGCACACCATCCTGACCATCCCAGC
TGTGCTGAGGAGCCACCACCCCCGAAGTGCACATCTGTGGCGTTTCGCGC
CAAGCACAGCCGGCGACACGTGCCGTGCTACATCTGCCAGTCCCCCGCGG
GCACGCCACCGTCCATTCCGAGACTGGCGGTAGAGGGATTGTGGGTTCAC
GAAGATGTACAAAGCCTTGCCAAGAGAACTAAAGAAGAGGACATCGCAGA
CTGGGCCAATGGTATGTGTGGCACTAGTGAAGATGTCCAAGGTATTGCCA
AGAAAGTTGACGAGGAAGACACAGAAGACTTTGTCAATGAAACTTGCGGA
GACCAGAAGACACCTTCTGCAATGTTGCACCAAAATATCCAAGGTCTAGG
CAAGAAAATTGAAAAGGAAGAGATAGAAGACTTTGTCAAAAGGGACCAAT
CTACACCTACCAAGTTGATGTACCAAGATCAAGATCTCCAAGGAATTTCA
AAGGAAGTTAACAAGGAAGACCCACAAGACTTCAGCATCAGCAAGATATG
TGGTGACCGAGATACACCTACCACACCAACCCACAAAGGTGAAGATGTAG
ATGATCCTGCCTTGGTCAAGGTCAAAGAAAACCCACAAGACTTGGTCCAA
ACAACAACCGCCTCATTATCGCAACAAGATGTCCAGGGTCTTGGAAAGGA
AGAGCAAGACACCTCAGTCATCACGTGCATGTGTGGAGCCTCTCATCAAA
TGGTTCCTACCACACTGACGGGTCAAGATGAAGACATCCAAGCCAAGACA
GTTGATAAGGAAGACCAAGGAAGCCTGGCTACTGAGAAAGACTCGAAGGC
CCAGACCGATGAGCCTAAACAGCGGGGAGGCAAGTGGTGGGATTTGAGGA
TAAAGAGAGAGAGGATGGCCAGGGACAGGACAGATGGCATCAACAATGAC
AAAAAGGATGCAAAGGAAGGAAGGAAGTGGTGGAGAAGAGTTTTCACTAG
GAAGAGTGGCGGAAAGAAAAGGGGCAGTGACAGTGATGGTGTGTTCAGCA
CCAAGGACAGGGTTGTGTTCAGATTATTTTGTGTACCAGTGACCTGTGTA
GATGGTATATTCAGCACCGTGGACAGGTTTAGAGTACAGATTGGGCTCTG
CACCGGTAGACTAAAAGAGGAGAGGATGGAGAACAAAGACGACAACCAGG
GTCTTACAACACCGCACATCCCTTCGCAGGAAAAAGACGACGACCGGGGT
CTTAAAACACAGACCTGCTGTTCTAAGGAGAACAAAGACGACGACCGGGG
TCTTAAAACACAGCCCTGCTGTTCTAAGGAGAACAAAGACGACGACCAGG
GTCTTACAACACCGCACATCCTTTCTCAGGAAAAAGACGATGACCGGATT
CTTAAAACACAGCCCATCTGTTCTAAGGAGAACAAAGACGACAACCAGGG
TCTTGCAACACCAGACACCTGTACTAGGGAGAACAAAGACGACGACCAGG
GTCTTAAAACACAGCACACCTGTTCTAAGGAGAACAAAGACGACGACCAG
GGTCTTACAACACCGCACATCCCTTCTCAGGAAAAAGACGACGGCCAGGG
TCTTAAAACACAGCCCATCTGTTCTAATGAGAAGAAAAACGACGGCCAGG
GTCTTAAAACACAGCCCATCTGTTCTAAGGAGAACAAAGACGACGACCAG
GGTCTTAAAACACAGCCAATCTGTTGTAAGGAGAACAAAGACGACGACCA
GGGTCTTGCAACACCAGACACCTGTTCTGAGGAGAACGAAGACGACGAAC
AGGGTCTTACAACACCGCACATCCCTTCTCAGGAAAAAGACAACGACCAG
CCCATCTGTTCTAAGGAGAAGAAAGATGACGACCAGGGTCTTATAACACA
GCACACCTGTTCCAAGGAGAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00454.0Blg00454.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00454.0-exon-Sc0000078-1570713199:762360..762366Blg00454.0-exon-Sc0000078-1570713199:762360..762366Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:761211..761441Blg00454.0-exon-Sc0000078-1570713199:761211..761441Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:760164..761009Blg00454.0-exon-Sc0000078-1570713199:760164..761009Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:759579..759692Blg00454.0-exon-Sc0000078-1570713199:759579..759692Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:759255..759341Blg00454.0-exon-Sc0000078-1570713199:759255..759341Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:758741..758867Blg00454.0-exon-Sc0000078-1570713199:758741..758867Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:758392..758407Blg00454.0-exon-Sc0000078-1570713199:758392..758407Branchiostoma lanceolatumexon
Blg00454.0-exon-Sc0000078-1570713199:756465..757211Blg00454.0-exon-Sc0000078-1570713199:756465..757211Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:756465..762366 -
Properties
Property NameValue
GeneIDBlg00454