Blg00412.0 (mRNA) - B. lanceolatum

Overview
NameBlg00412.0
Unique NameBlg00412.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:20551..22365+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00412.0 ID=Blg00412.0|Name=Blg00412.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1815bp|location=Sequence derived from alignment at Sc0000078:20551..22365+ (Branchiostoma lanceolatum)
TAAGCTGGGCAGCCCCCGGCCACTTAGGTGTCGGTCCGCCACCGTCTGTT GCTTCAGAGGGTGCCTGGAGCTCAGTGTTTTGACCAAGCACGAAGGTCGG ACGGTAATCTAGTACCCAACGCTCACGGTAACACTAAAGCAAAGAGAAAG ACTCCAGTTTTGAGAATTGCTACATGGAATGTGCGCACAATGTGCACAGG TCTCTCCGATGACCTAAGAGATGTGAATGATATGAGGAAGACTGCAATTA TTGATAGGGAACTGACTAGATTAGACATAAGCATAGCAGCACTCCAAGAA ACCAGGCTTGCCTCAAGTGGCTCCCTGAGAGAGGAGAACTTCACGTTCTT CTGGAAGGGCAGAGGACCCGACGAGCCTCGCCAACACGGAGTCGGCTTTG CTGTAAGGAACACACTCCTAGCTGCAGTAGAACCCCCGACTGGAGGCACT GAACGCCTTCTCTCCATGCGCCTCAGCACTGCTGCTGGGCCTGTCAACAT TCTTAGTGTCTATGCTCCTACTCTCAACTCTTCAGAAGACAACAAAGATC AGTTCTACGAGCAGCTGAATGAAATGATCACAAACTGTCACAAGGATGAA CCGCTGTTCTTACTAGGCGACTTAAATGCCAGAGTTGGCACAGACCATGA GTCTTGGCCCATCTGTCTTGGCCACCATGGCATTGGAAGGATGAATGGAA ACGGACAGAGACTGCTGGAGCTGTGTTCTTACCACAATCTCTGCATCACC AACTCCTTCTTTGAGTGCAAACCACATCATAAAGTGTCCTGGAAGCACCC AAGGTCCCATCGCTGGCACCAGCTTGACCTGGTCATCGCCAGACGCACTG CTCTGAACAGTGTCCTCCTTACTAGAAGCTACCACAGTGCGGACTGCGAC ACGGACCACGCCCTTGTGAGCAGTAAAGTACGCCTACAGCCTCGGATTGT TCACCGCTCTAGACCGAAGGGTCGTCCTCGTGTAAACGTTGCACACATGT CACTCCCCGACAGAGTCACAGAGTATGTGTCCAGACTAGACCAAGCCTTC AAGGAAATTCCACAAGATGCCTCCTCTGATGCCACAGCAAAATGGAAAAC CATGCAGGGTACCATTCACAATGCCGCACTTGCCGCTTTTGGCAAGAAAA GCCGACCCAGTCAAGACTGGTTTGACGCCCACATCTCCAAAATGGAACCA GTAATTGAGGCCAAACGCAGAGCCTTCTTATCCTACAAGCACTGCCCGAC TGGTCAGTCACTTGCAGCACTCAGGACTGCTCGCAGCGACGCACAGCGTA CTGCTAGAGAGTGCGCGAACGACTACTGGCAGCAACTTTGTGTAGGGATA CAGCGGAGTGCAGAGTCTGGAGACCTTCGGGGGATGTACTACGGTATCAA GAAGGCGCTAGGACCAACTGTGAAAAAGACTGCCCCTCTGAAATCCCTGT CAGGGGAAAAGATCACTGATCAAAAGGAGCAGATGTCCAGATGGGTAGAA CACTACTCTCAACTCTACTCACGCGAGACGTCAGTCTCCGACACTGTTCT CAACAGTATGGAAGACCTTTCCACTATGGAGGAACTAGATGTGGTGCCAA CCATCGAAGAGCTGAGCAAAGCCATTGACTCTCTCCCATGTGGAAAGGCA CCGGGTAGTGACAACATCCCTCCTGAAGCCATCAAGCGTGGGAAACCAGC CCTGCTTCAGCCGCTGTATGATCTACTTTGCCTCTGTTGGGAGGAAGGGG CGGTTCCTCAAGACATGCGTGATTGTTACTTTGTACAAAAACAAGGGAGA CCGCGGAGATTGTAA

Coding sequence (CDS) from alignment at Sc0000078:20551..22365+

>Blg00412.0 ID=Blg00412.0|Name=Blg00412.0|organism=Branchiostoma lanceolatum|type=CDS|length=1626bp|location=Sequence derived from alignment at Sc0000078:20551..22365+ (Branchiostoma lanceolatum)
ATGTGCACAGGTCTCTCCGATGACCTAAGAGATGTGAATGATATGAGGAA
GACTGCAATTATTGATAGGGAACTGACTAGATTAGACATAAGCATAGCAG
CACTCCAAGAAACCAGGCTTGCCTCAAGTGGCTCCCTGAGAGAGGAGAAC
TTCACGTTCTTCTGGAAGGGCAGAGGACCCGACGAGCCTCGCCAACACGG
AGTCGGCTTTGCTGTAAGGAACACACTCCTAGCTGCAGTAGAACCCCCGA
CTGGAGGCACTGAACGCCTTCTCTCCATGCGCCTCAGCACTGCTGCTGGG
CCTGTCAACATTCTTAGTGTCTATGCTCCTACTCTCAACTCTTCAGAAGA
CAACAAAGATCAGTTCTACGAGCAGCTGAATGAAATGATCACAAACTGTC
ACAAGGATGAACCGCTGTTCTTACTAGGCGACTTAAATGCCAGAGTTGGC
ACAGACCATGAGTCTTGGCCCATCTGTCTTGGCCACCATGGCATTGGAAG
GATGAATGGAAACGGACAGAGACTGCTGGAGCTGTGTTCTTACCACAATC
TCTGCATCACCAACTCCTTCTTTGAGTGCAAACCACATCATAAAGTGTCC
TGGAAGCACCCAAGGTCCCATCGCTGGCACCAGCTTGACCTGGTCATCGC
CAGACGCACTGCTCTGAACAGTGTCCTCCTTACTAGAAGCTACCACAGTG
CGGACTGCGACACGGACCACGCCCTTGTGAGCAGTAAAGTACGCCTACAG
CCTCGGATTGTTCACCGCTCTAGACCGAAGGGTCGTCCTCGTGTAAACGT
TGCACACATGTCACTCCCCGACAGAGTCACAGAGTATGTGTCCAGACTAG
ACCAAGCCTTCAAGGAAATTCCACAAGATGCCTCCTCTGATGCCACAGCA
AAATGGAAAACCATGCAGGGTACCATTCACAATGCCGCACTTGCCGCTTT
TGGCAAGAAAAGCCGACCCAGTCAAGACTGGTTTGACGCCCACATCTCCA
AAATGGAACCAGTAATTGAGGCCAAACGCAGAGCCTTCTTATCCTACAAG
CACTGCCCGACTGGTCAGTCACTTGCAGCACTCAGGACTGCTCGCAGCGA
CGCACAGCGTACTGCTAGAGAGTGCGCGAACGACTACTGGCAGCAACTTT
GTGTAGGGATACAGCGGAGTGCAGAGTCTGGAGACCTTCGGGGGATGTAC
TACGGTATCAAGAAGGCGCTAGGACCAACTGTGAAAAAGACTGCCCCTCT
GAAATCCCTGTCAGGGGAAAAGATCACTGATCAAAAGGAGCAGATGTCCA
GATGGGTAGAACACTACTCTCAACTCTACTCACGCGAGACGTCAGTCTCC
GACACTGTTCTCAACAGTATGGAAGACCTTTCCACTATGGAGGAACTAGA
TGTGGTGCCAACCATCGAAGAGCTGAGCAAAGCCATTGACTCTCTCCCAT
GTGGAAAGGCACCGGGTAGTGACAACATCCCTCCTGAAGCCATCAAGCGT
GGGAAACCAGCCCTGCTTCAGCCGCTGTATGATCTACTTTGCCTCTGTTG
GGAGGAAGGGGCGGTTCCTCAAGACATGCGTGATTGTTACTTTGTACAAA
AACAAGGGAGACCGCGGAGATTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00412.0-exon-Sc0000078-1570713199:20551..22365Blg00412.0-exon-Sc0000078-1570713199:20551..22365Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00412.0Blg00412.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:20551..22365 +
Properties
Property NameValue
GeneIDBlg00412