Blg00410.2 (mRNA) - B. lanceolatum

Overview
NameBlg00410.2
Unique NameBlg00410.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000078:459143..466078+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00410.2 ID=Blg00410.2|Name=Blg00410.2|organism=Branchiostoma lanceolatum|type=mRNA|length=6936bp|location=Sequence derived from alignment at Sc0000078:459143..466078+ (Branchiostoma lanceolatum)
ATAGCCGGTAATGAACTGCGGCCTCGCATCAACTTGCTTTCACATTGTGA CAGATAATCATATATGCAGACACATACACTCTTATAGACATACAGACGGG CTAATAACTTTTGGGTGGGGATGGGGCATTAACAATAACTTATTAGCTAC ATACCAAGATGTTACCTTGAATGGCCAAGAAGTACAGTATACGTATACCA GCTGCAAACTGACATGGCTTAGTCACACATGACGGACGGGAGATGGGTCT TGGTCACATTTGGCTGACGGCCTGGGCGTGACAGTGTAGGCTTTGATCGA TGGAAAAAGCTACTACAGTAATGATGTATTCTCCATATGCTACTTACGTT CACCATACGGTCACGACAAGTGTCAATCAAAACCTTATTTTCATATTATA TTAGATCACGTTCATGCCAGCTTGACAACATGGCGCATGCGCGGGAGTAC AATGGCGGGAGATAAAGAAAGCTTACCCATTGGTCGAACCAAGATCGAAC TGTGTATTGTCAACATCAACCTAATTGTGATCGGCTGTCTCGTCGGGCGG GTTTTCAGTCCCTTCTCTAATCGTAATTTGTTCTTCGTTGTTTATCTGAA CTCAAATCTAGGATACTCGACGTTGAATAGGTAAGTCTGAGTTAAAATAG CGTTTCTTGTGGACGTTCGAGCTTTTGTGATCAAGCAGTTAAGTTAAAAT GTCGATGCAGAGAGGCTGGTGTGAGCGCACGCGATCGTCGATTAACTGTT CCCATGACATCTAGTAAGTATTCTCTTATTCGTAGTATCTGGAGTGTGAA GCTCAGTGAGGCATGAACTGCGGCCTCGCATCAACTTGCTTTCACATTGT GACAGATAATCATATATGCAGACACATACACTCTTATAGACATACAGACG GGCTAATAACTTTTGGGTGGGGGTGGGGCATTAACAATAACTTATTAGCT ACATACCAAGATGTTACCTTGAATGGCCAAGAAGTACAGTATACCAGCTG CAAAATGACATGGCTTAGTCACACATGACGGACGGGAGATGGGTCTTGGT CACATTTGGTTGACGGCCTGGGCGTGACAGTGTAGGCTTTGATCGATGGA AAAAGCTACTACAGTCATTGTTCGTTGAGGTACTATATTTGGTCTGTGTT TTTTAAATTATGTATTTTATTTTCTATATGCTACATACGTTCACAGCGTC AAAAAGTGTTAATCAAAACCTTATTTTCATATTATATGAGGTACAATTAA ACAAGACATGAGGAAAGGTCTAAATATTTCACGGAGGTATGAGATCTTCT AACATCACCCCCTCCTCGTTATAACTGGTTTGTTTCTTCCCTTCTCTGAT AAATTGTTCAATGCAGTTATGTGTATTCACATCCAGATATTTTGTGCCTA CCGGACTTCTCCAGACAATTTGTATCTTATGACAGAATTGCATATATGTA TATAACACATATTCAGATGCATGACATAATACACAAGGATCACAAGAATA TACAATTTAGAAACTCAGAACCAGTCCTAACTCTAGTCCTAAAGTCCATT TCTAACAGTCAATAGGCAATAAGTTTTCTTTGTTGTGTTGGAAGTTCATT CTAAAGTACCCGACCCGTGTGCGTCAGACTTCTCTAGAAACGCTTATGCA TTAGTTACATTAAAACATAGAAATCTAAAAGTTACTTTAAAACATAGAAA TGCAGAAGAACTAACAACGGTCCAGTCACCTTTTTTTTTAAATCTGTTGA AGTGCAATGTATTGATGGACAGCCGCGATCGCCCTTTGTAGACGGACGGG AGATGGGTCTTTCAAAATAAGATTCCAAAAGAATTGAATCATCACTCGCA GTGTAGAGTTTCTATTTTTTGTATTTCTCTCTGAAAAAGTCTTTATCTCT CCTATCTGTTGTTTCAGTACATATCGCAATCTGCCTGCATCAGTTAAAAA AGATCATGATCACCTGGTAGCCTAAATAATGCCTGGATGTACATCTTCAC AAAACATAAACGTATTCCACACAAAGATTGAATTTACCAACAGCGTCCAA TAATTGGTAAGTCTGAGAGGAACGTATTGGAATGGTCACTAATTAGATTT TGCAACAGTGCTCATGATCAAGTTTGTGTGTTTTCTTTTCTTTTACATCA TACTTTTCGTTCCCGCAAAACTGGTTGGGAATTGTGACCTAGGCATTACG TAGGATACATTGCAATTGCAATTTGGTTGATTCGCTATATCTTGTTCTCA AACGATTTCATGTACTTCATAGCTTTCACTTCAGGTTCAAACTTTCAAAC ATGTCTGTCCCACGTCTGTTGTAGCAGAAAACATGTTGGCAGAAACGACT ACATCCCTAGACACGTACCTCAACCCCAACTCGACCCCAGAAGAGACGGC AAAATGTTACGACAACTGGTCCGGGAACTATGAAAAGGTGTGTACCTGAA TGATGTGCTAGCTATAGAAACAAGCAAAAATGATAAAAAAAGCAAACAAA TATACCGGAGATCTTATTACTGTAAAAGGCAAAATGTTCACGGGGATTAA TTTCACGGTAGGGAGAAAATGGAGTGTTCGCTGTGGTTTTAGGTTTGCGG TTGAAAGTACCATGAAGGGTTTTAATTACTGTGAAAGGAGAATGTTCGTG GTGGTTTAAAGTTCTCGGTGAAGAGTATTCTCCAAGCAGAGGTTCGGCTC CGTCTATTTTTTATGTGTTTAGGCATTTTCTACGTACCAGCAAAGAAAAT TCTGGATTTCAGAAGTGACAATAAGCTGATAGCTTATTGAGATATGCATT TTTATACAGTTTCAGTCTCCTACAATGGTTTTAAGTGGTTCAGGAAATGG TTCTAAATGAACCTTNATGGACCTTGTAGGACTATGTGCTTCTGATGGAC ATTCAATGGGGTGGTCAACTTGAAATAAACTCAGTGGTTCATAACAATCA ATTGAGCTATTTTAGTCTCAAGATCATAATGTTCCTTTGCCAAATATCAA CTCATTCGGTGGAAAAATTAACCTGTTTTAGAACCACTTGTATTGCTGTT TGGTTCACCCTTGTTACTGATGAATGACGTCAGCTGTTCAGTCAGGACTG ATAGACATGATCCACCAACATATTAACACAGGGTAGACCCCGATTTTTCT CGAAAATTGATTTGGGATCTTTAACGTAGTTAGCTGACGCGCGACTCTTC TCAAAAACGGGATCTCTGCTTTGGACTTCCCATTGGCATTGGAAAAACTA TAATTTACCTCAAGCGAACGAATAAGTACAGTAGATCTAACTCGTGCCAG TCAAACTCAAGTTATGTCAAAACGTTTCATATAAATAGTTGATACAATAC GTTTAGTTGAGTGCACCACCAATACATATGTTAAAAAAACGGAACGCCAA GTCGAGCTCCGTCCGCGGCGGGCCCCGTCCTTGGTGCTGAAATGGGGGTC CCTCGCTCCTACGTCCTCCTCCGCCGAGTGAGTCAGTCAGTCCGTCCGAT GAACGAGCGACGGAGGAGGCGTCCCGAGGTGGTCGGGCAAGTTCGGCTCA GCCCCGTGCCTGGTGGGCAGGAGTAAACCCAAGGGTGGTAGGCAGAGGAC GCTCCGGTCTGGCATGTCATTGTGACGTCACGGCTCCCAGAATCATGCTT TAGATATCTATCCTAAAGCAGATGGCGGTGAAGTTCGTTAAGTTTAGCCG CCCCAAAATCGGAGAATCCTAGCTATAAGAAAAGCGGTGTAGTCACCAGT AAACCTTGCGATCTTAATCTTCGAAACCGACATCTGCTTGGAGATTGATT TATGCCGTCTCTCTCAACAGGAGTTAATGACGCAGCTGAAGTGTACTGCT CCCAGAGTGTGCGCCGACGCTATGGAGAAAACTATGGGCGGCTCAAACCG CAAGGAGGTCCGTATTCTTGACGTGGCGGCCGGGACTGGACTGTGCGCGG AAGAGGTTAGGTGGTTCAAGTGATAATCTGGTTTACGGTTAGCCCCAGCT GGGCATGATCGTCTGAGCCCCTTCCTCAGAAACACTTCTTGTCTAGACCA TGCTTGATATATGATGTTCAGACGGCTTTTTTCATGTCTCAGCGGATGTC AAAGTAAAGTGCTTTTCAACGCGCGCTACCACAGTCAATTTTTTCATCAG GGCATGATGAGGTACATGTATGCTACTCCTTGCCACATGGTGGCGTTACA ACGGTAAGAAGGATGATGTCTTGAAAGTTGTCACCCTCATTAAAACAGGA CCCCCATCGCTCCACGTTACATCGCTCGCGAAAGGGGCCCTGATAACCAC CGCCACCAGACATGGTTCTGGCGACGTCGCCGACACTTGCTCATGAATAA TTAATGAGCTGGCCTTATTTGGCAATGAGCGGACTGACGAACTCATCTCC AGACGGAAGTCGCGGACAAGGTCGGTGGGCTTGCTCGGCTTTCGCTGCCG CTGGGAAGCCCATATAACAGAGGCTCTTCCCTCCGCCTGTCCTTACACTT AGAAATATGTCCCTGTCATCAAGCAGTGTCTGTAGGGTGGACTGCTGATG CTGACGAAGCCGCTCTAATCCAAACAAGTCTTCCACAGCTGAAGCAAAAC TATCGGCTGCCATTTGTTTTGGGTAACCAAAGCAACGATGTTATAATCAC CCGTAACCTGATTGGTTGATAGCTTCCCAGCGTTCTTTGCGCGTTTGCTA CCGATGAGGGGAAGCAGGTGACGTCGCCAGAACCGTGTCTGGCGGCGGTG TTTATCAGGGCCCCTTTCGCGAGCGATGTAACGTGGAGCAATAGGGGTCC TGATTTATTGAGGGTGTACCGCTGTACACTCCGATGAAAGCAGCCAAGAC GTCCGTGAAGGCGTTGGCTGCGGCTGTGTAGAAAGAACTAAGCTTATCAA TAACTTACCAAGCTACTCACATCGATATTATTTCACCATGCGGCAAGAGG ACAATTCAGGCTCTGTAGCTGTGTAATGCTTAGGTCCCAATTGAAACAAG AGTCCGTAGGACACAATCTTCCGTGAAGTAATAATGGTATGTGCGGTGTA GCTTACCCTAGCCGGCTGATAGTTACAGGGTTGGCTGATAGTTACGGGTT GGCTGCAAAAAGTGCATTATTTAGCCCCCAAAAAAGCCGGTTCAGAGCCT GCAACGGAGGCTATCTCTTGCAGTCATTCTATTAATTCGATCGATTGATT TATTATTCCTTAGCTGGTGAAGAAGGGATTTACCAACATAGACGCGGTAG ACGGGAGTCAGGGAATGCTGGACCTTGCCGAGAAGAAGCAGATCTACCGC CGACTCATCTGTGACTTTGTTGGACCGAACCCCCTGGACATCGAAAACAG TAATTGTCGTATTTCACAATGTCTAACAACCAACAAAACGAATCAAATCC GAAATCTTGAAAACTGGCAAAAGGAACACTTGATAAGCTTTCCTTTTTTT AACTAAGAAAAACTGGACAGGTCTTAGTACGTACCTACAAACGGCATATA CACGGAGAGATCATATGAATCTCTCACAGATTCCAAACTTCTGGAATACA TAGGTTTAGATCAAACCGTATATTCTAACTGAAAAACAACTGTTCCCTTC ATAGACACATATGACGCCATTGCCTGCTGTTCTGCGTTCGCCGCGGGTCA CCTGAAGGAAGACTGACAACCTGAGCTCATACGGGTCGTCAAACCAGGTG AGCTGCAGGTCTAGATTTCAGATAAGCCTCATCTAATGTCAAACCGGTGC AATGATCAAGGGNTATGAATCTCTCACAGATTCCAAACTTCTGGAATACA TAGGTTTAGATTAAACCGTATATTCTAACTGAAAAACAACTGTTCCCTTC ATAGACACATATGACGCCATTGCCTGCTGTTCTGCGTTCGCCGCGGGTCA CCTGAAGGAAGACTGTTTACCTGAGCTCATACGGGTCGTCAAACCAGGTG AGCTGCAGGTCTAGATTTCAGATAAGCCTCATCTAATGTCAAACCGGTGC AATGATTTAGCGCTAGAGTATTTGCCCTACATTGGTTCGTTCTGATTGCG GCTGCATGGTGTTCTGACCACTGCAGCAGCAGAACACAGTGGGCTACTAC TACTACTATTGGTTCAAAACCTCTGCCGGGTATCATACACATAGAATATG GCACCGTTTCGTCTGCTTAAGCCGGCGTCACAATTCATGCGAGCGTCGGC CGAACTTGTAGTTCGCCCGTAGCTCGCCGAATGTCAAAATCGCCCGAGCG TCGACCGTATTTGCCAATGAAAATCTCGGGTGACTTCCGTCAAACACTAA AAATCCCCCATGAGATGGTACCATCTCTTGGACATGGACAAAGTCAGAAT CGACTAACCTGGTAAAAGGCCAATATTTGGATCAACTTTGATTTCTGAAA ATCGCCCGAAGTCCGCATAATCGACAGAACGTCGGCCGTACTTCGGCCGA AAATGCACATTTGAAGCTCACCAACACGTCGACCGAGCTGAATTTCTTAT TTGTGACGGGGGCTTTAGCACTTGGGAGAATGAGTATGGGAGTTCAATTC TCTACGCTGCAAGTGGACTAACAATGATTATAGAAACGTAGGGGGTGGTG TATTTCGTTGTTACCTCCATGAAGAATGGAGGTATTGTTTCGGGCGCTTC TGCGTGCTTGTGTTTGTAACATGTAAAATGAATAGCCCCAAACCCCCGTA ATGCGAAGTGACAAACACCCTAATCGTCCATTTCCTCATTTCCAGGCGGC TACATCGTCATCACGTTCCGCGAGGAGTGGTTGCACCATTACGAGGATTA CAAGGATAAGCTGGAGCCCGCCATGGCCCGCCTGCAGGACAAGGGGCTCT GGGAGCGAGTCAGCCGGGAGGTACCGGTCTTTCCCAACTTCTACCCAGGC AAGAACGGGATAACCATCGTCTACAAGGTCCTGTAG

Coding sequence (CDS) from alignment at Sc0000078:459143..466078+

>Blg00410.2 ID=Blg00410.2|Name=Blg00410.2|organism=Branchiostoma lanceolatum|type=CDS|length=660bp|location=Sequence derived from alignment at Sc0000078:459143..466078+ (Branchiostoma lanceolatum)
ATGTTGGCAGAAACGACTACATCCCTAGACACGTACCTCAACCCCAACTC
GACCCCAGAAGAGACGGCAAAATGTTACGACAACTGGTCCGGGAACTATG
AAAAGGAGTTAATGACGCAGCTGAAGTGTACTGCTCCCAGAGTGTGCGCC
GACGCTATGGAGAAAACTATGGGCGGCTCAAACCGCAAGGAGGTCCGTAT
TCTTGACGTGGCGGCCGGGACTGGACTGTGCGCGGAAGAGCTGGTGAAGA
AGGGATTTACCAACATAGACGCGGTAGACGGGAGTCAGGGAATGCTGGAC
CTTGCCGAGAAGAAGCAGATCTACCGCCGACTCATCTGTGACTTTGTTGG
ACCGAACCCCCTGGACATCGAAAACAACACATATGACGCCATTGCCTGCT
GTTCTGCGTTCGCCGCGGGTCACCTGAAGGAAGACTGTTTACCTGAGCTC
ATACGGGTCGTCAAACCAGGCGGCTACATCGTCATCACGTTCCGCGAGGA
GTGGTTGCACCATTACGAGGATTACAAGGATAAGCTGGAGCCCGCCATGG
CCCGCCTGCAGGACAAGGGGCTCTGGGAGCGAGTCAGCCGGGAGGTACCG
GTCTTTCCCAACTTCTACCCAGGCAAGAACGGGATAACCATCGTCTACAA
GGTCCTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00410.2Blg00410.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00410.2-exon-Sc0000078-1570713199:459143..459772Blg00410.2-exon-Sc0000078-1570713199:459143..459772Branchiostoma lanceolatumexon
Blg00410.2-exon-Sc0000078-1570713199:461467..461579Blg00410.2-exon-Sc0000078-1570713199:461467..461579Branchiostoma lanceolatumexon
Blg00410.2-exon-Sc0000078-1570713199:462963..463097Blg00410.2-exon-Sc0000078-1570713199:462963..463097Branchiostoma lanceolatumexon
Blg00410.2-exon-Sc0000078-1570713199:464356..464491Blg00410.2-exon-Sc0000078-1570713199:464356..464491Branchiostoma lanceolatumexon
Blg00410.2-exon-Sc0000078-1570713199:464997..465089Blg00410.2-exon-Sc0000078-1570713199:464997..465089Branchiostoma lanceolatumexon
Blg00410.2-exon-Sc0000078-1570713199:465888..466078Blg00410.2-exon-Sc0000078-1570713199:465888..466078Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000078genomeSc0000078:459143..466078 +
Properties
Property NameValue
GeneIDBlg00410