Blg00365.6 (mRNA) - B. lanceolatum

Overview
NameBlg00365.6
Unique NameBlg00365.6
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0001364:9..1184-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00365.6 ID=Blg00365.6|Name=Blg00365.6|organism=Branchiostoma lanceolatum|type=mRNA|length=1176bp|location=Sequence derived from alignment at xfSc0001364:9..1184- (Branchiostoma lanceolatum)
ATACCTCACACATTGTATCTATTGTATGCCTGCTGACAAAGGAGGTGACT GAAGGAGCAATGTTAGGATTGGAGAAGCTACATAACAGTCAAGGGTAATC TTGTTGTGTTTTCCTGAAAGTATTAAAGGAATGCAAAATGATACCACACA GTCAATATGCATTTGGGTTCTTAATGACATAATTATATTTGATTTGCTAT CCTTATCTTGCTCTTATCATTATTATTGATAATCATTTCATCATTTCTTG CCATGTTTCCACTTTGTCATACATTGTATGTCCATTTGATTTTTTTTCAG ACACAGGGAGAGGAGTCATGACAACCAGAAATCTAAAGGTAACAATACTT GCTTTCATTTTTTTTCATAGTATGTCAAGGATGCTTTATGATGAACACAT CACTCTTGTTGATAAATTGAAGAAGTAAGGATACTTCAAAAATAACCACA AATTTGCTATTTCTTTCAGGAAGGAGATTGTATTGTAAGTTTACCAGAAA ACTTGCTCATCACAACAACCACAGTTGTTAACAGCCGTCTTGGCCAATAC ATAAAAAAGTGAGAATCTTTACTGGTCATTACTTATATATCTAAGTAATC CATTGGTGGATTTTGAGTGTGAAGAGAGACAATTGTAGGTTGTTATGTAA TACGTTTTACAGAAGATTGTTGATTTGTTATCATATTCAAAGAGAATAAT AAACATTGCATTTTTTTGTCAGCTGGAAACCACATCTCACCCCAAAGCAG GTCCTCAGTTTGTATCTCATTGCTGAGAAATCCCGTGGGAAGGACTCTTT CTGGTATCCATACCTCCAGACTCTACCAGCATCATACACAACTCCCTCCT ACTTTTCAACTGCAGAAGTCGACGCCCTTCCTCCTGCTGTGCGGGAGGCC ACCTTGCAACACAGAAAAATACTGCAGAACTCTTACAAATCTTTGAGAAC ATCCCTGCACACCCTGGAGCCCCTATTTCCAGACTGGGAGACTGTTTTTA CATTTAAGTCCTACCGTTGGGCATGGGCCACAGTGTACACCAGGTCTGTG TACAAGAGAGGCCCAGGGTGGGAGTTCTTGGACCCCAGCGATCGGGATGT GTATGCCTTGGCTCCATTCTTAGACATGTTGAACCATTCCCCCTCTGTAC AGGTAAGAACCCCAGTACCATGTTTC

Coding sequence (CDS) from alignment at xfSc0001364:9..1184-

>Blg00365.6 ID=Blg00365.6|Name=Blg00365.6|organism=Branchiostoma lanceolatum|type=CDS|length=564bp|location=Sequence derived from alignment at xfSc0001364:9..1184- (Branchiostoma lanceolatum)
ATGACAACCAGAAATCTAAAGGAAGGAGATTGTATTGTAAGTTTACCAGA
AAACTTGCTCATCACAACAACCACAGTTGTTAACAGCCGTCTTGGCCAAT
ACATAAAAAACTGGAAACCACATCTCACCCCAAAGCAGGTCCTCAGTTTG
TATCTCATTGCTGAGAAATCCCGTGGGAAGGACTCTTTCTGGTATCCATA
CCTCCAGACTCTACCAGCATCATACACAACTCCCTCCTACTTTTCAACTG
CAGAAGTCGACGCCCTTCCTCCTGCTGTGCGGGAGGCCACCTTGCAACAC
AGAAAAATACTGCAGAACTCTTACAAATCTTTGAGAACATCCCTGCACAC
CCTGGAGCCCCTATTTCCAGACTGGGAGACTGTTTTTACATTTAAGTCCT
ACCGTTGGGCATGGGCCACAGTGTACACCAGGTCTGTGTACAAGAGAGGC
CCAGGGTGGGAGTTCTTGGACCCCAGCGATCGGGATGTGTATGCCTTGGC
TCCATTCTTAGACATGTTGAACCATTCCCCCTCTGTACAGGTAAGAACCC
CAGTACCATGTTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00365.6Blg00365.6-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00365.6-exon-xfSc0001364-1570713199:847..1184Blg00365.6-exon-xfSc0001364-1570713199:847..1184Branchiostoma lanceolatumexon
Blg00365.6-exon-xfSc0001364-1570713199:627..715Blg00365.6-exon-xfSc0001364-1570713199:627..715Branchiostoma lanceolatumexon
Blg00365.6-exon-xfSc0001364-1570713199:9..462Blg00365.6-exon-xfSc0001364-1570713199:9..462Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0001364genomexfSc0001364:9..1184 -
Properties
Property NameValue
GeneIDBlg00365