|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:1134053..1140837+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00360.0 ID=Blg00360.0|Name=Blg00360.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6785bp|location=Sequence derived from alignment at Sc0000086:1134053..1140837+ (Branchiostoma lanceolatum)
ATGACCGGAAATGACGTCATTCTACGGTTCATTGGTGCAGACAACACCGG
TGAAACAAGTAAGATAAGAAAACCGGTGAGGACAAAGATGGCAGCTGTAC
CTGAAAATTCACCTCGAAAAACATCTCTTTCTTCCTCGCTGCTTTTTCTA
TATTTGGCTCTAAGGGCATCAGCCACTACTTTGGATTGCAACTACGATCA
ACAATTCCATGTGAAAAGAGAGGAATATGGAGACGTATTCACCAACCCTT
GCCAGAACGTCGAATCGAATAACCAGCGCTACTGTCACGACAACTGCTCG
GCGAAGGAAGCAAACTTTGTGGGGAAGTTCACGTTCGACGGCGGTGTGGA
GCAGTGTGCTTGTAAGTGTCGCCAGAACACTCACGTATTCGACGTCAACA
GACAGGTGTGCGACAATACGGAGCTATCCGCAGGTAAGAAGTCAAAAATG
GTATATGGCATATAGGCAGCTTATTGTTAGAAGTATTTATCATATAACAG
ACAATACTTCTTAATTTTGTAACGTTATAGTTCATTTGAATCTTATTTCG
TGTAGATAGCTTTCCCATGTGATGTCGCAACGAATCATGTCGTTCCATTT
CATTGGATTCGCAGAGAAAAGATAACACTACACCCACTGGAATTTCTATT
TAGGTCATGTCATTGTACACACTGGTAATGCAAATGATGGGCTATGTACT
AACTACTGGGTTGTAGTAAGTAACTTAAATGTAGGGCACACATTTGTAGG
TACGTGGATGCCATTTACGTTGGTGGTTGCGTGACCCGCAAGTACTAGTG
CATCTAGCGCCATGACAACTAATCCACTCGTAGCCTTCTCAACACAAGAT
TGAGTAAGTCCTTCAGGCGCGGCTGTGTTTAAAGGGGAACAATGAGGGAC
TTGGAGCCCATAGGTGAGGTGGCACCAAATGGCACCAAAAGGAGAGACCC
TCAAAAGGAGACTTTGACCACGTCACACTATGGCCATAGAATGTTTGCAA
GGCGCATGTTTTGACCGATAGAAAAGATCATGTTTACCACGAGGATGGCT
GTGAGAGAACGCAAACGAAACGTAAATACAGACATAACAACAAGAACAAC
AACAATAGTACAATTATAAGTTTCAAAGCCTCAGATATAGAAGATAAACA
ATCTTCAAATTGTTTGACGATTCCATTTTGAAGCCACCCACCCCCTCCTC
GCCCCGTGGCAAAGCCAAAATAACTGGCGTTGATCCTAAAAGGCGTATGC
AAGAAGGCGTGAGTCAATAGCGACCTCATATACAAACACATATACTGTAT
TTCTTTATTCTTATCTGCCTGCACTCATTTCTTCCCTTTTTGTGTTCTAA
ATGTAATCTATACATGAGGGCGATGTCAAAGAGTGTGTTTTACACTGCCA
ACATAGTAATTATGTACGTATATAGAGCCAGTATTTGGTAACTACATCGT
ATTTATCTGATCTGATGAAGCCTTCCGTGACAGGGCGGAGCCACGTTACG
CAGTGTTTGGTATCACCGCAAATACCTCCCGTATAATCCTCACAGCACGA
CACATCGTGCAGATGTGTGGGGCATGGAATAGTCACAGGACAATTGTGCT
TTTTTTGGAACTGTCGCTCCCAGGGAATATGCACGGCGTTCTAATACAGT
CAAACCTGTACTTGGGATCAACTTGGTAAACGAGTAGAGCAACTTTGGCC
ACTTGCTGGTAGTACTAGCAATATCTAAGAGCTATTGACCTAGAAACCGT
GTTACTTTATACCCCCTTTGCGTGATAAAGAAAGCATAGCCACATTGCTG
TAAAAAAAACTGATGACGTCAATGAATAGTGCGTTGACCATTATACGCAA
TCTACAAAAGTCTAGCAAACGTTAAATAAAACATTTGATATGGTAAAGAG
TATAAATACAGTGGGCTAGTTGTCAATATTGGTGCATTTAGTGAAGAGTA
TTGTTACGTTGATGAAGGTTAGACATCCAGGTAATAAGATATGCCAAAAA
TAGTTACTCAAGCAACTGGATAAAATTTCAACATTTCATCCAGTTACTTG
AGTAACTATTTCTGACGTAAGGGTATTGTTGACCTATGGTGTATTTTTAT
TATTTTCTCTGTAATATGTAGCTACATATTGTGATTTAGATGCGAAAAAC
AATGACACTTGATTTACACCATTTTACAAAATGACATCTGCTAATGTTTC
GTCATCATTGCCTTTATGTAATCGTCCCTAAGTGCGATGTATGTATGTGC
GATGTGTGAAATACGTGTGTTCTATTTCTAAATTTCGGAAGACTAGCCAA
TGGCTAAAGGGTATCTTAAAACAGAAAATGAAGGGAATGTGATTTCTGTA
GGTAACAACCAGACGTGTCAGGTGACGGTTGGAGATGCTCTCTATCAGAC
CCTTGAGATCCCGCTTGGCCAGTCGTCAGTGTTCCTCCAGCCAAGAAGAG
CGTTACGTCTCAGCGGCAATTTCCTGACGCAAGCGCAGTCATGTCAAGTC
ACAGACGAGTTCTACCAGGACAGAACGGCTATGTGGCCGCTGGACTACAT
CTTCAGCTCTAGCTCGGCGAGCGGACCATTCTTCAAGCTGAGCGCACGTT
CAGATGGATACATGTACATTAAGGTTAGTATTCTGCACTTCCATATTTTG
AACATATTCACTACTTCATGGTTTTTACTCATACCGGTGCGGATGTATGT
TTGAGTTGTTTTCAATAAGGTATAGGACTGAGGTGTCTAGTAAGAAAATC
TACAACAATCTGAGTAACGGACCAAAAGGGACACACCAAATAGCCGTAAC
AGTACATCTGTTTGTAGATAAGTTTCATCCTTCGAAATTATGACCATATT
GATAAGTTAGGTGTATCGTTCTTTATCGATTTGTTCAGTTTAATACAATA
CAGACCATGTCGACGTTACTCGAGTACTCCCTAACTTTTGGATATACATG
TGTATGACAAAAGATCAGACGTCAATTTATGAAGAATATATGAACTTAGC
TATCGTGTGTCAACTATGTCTATTTGATTTATTTGCTCCTTTGGTCTTAT
CACTTCATTTTTGTACTTATTGAGACATGTATATTTTGATCTATTAGAGA
GGACGTGATAAAACAGTTCTTATTTTTCCGTGAATACTTTCATCAGGCTG
GTAAGTCACTAAATAAAAAGACTCTTTTTACACAACCAAGTCCAAGATAT
CTATTCCACCGACGTTTCGGTGACCATCTGTCACCTTGTTCAAGGCAATT
CTGACCGGTTCACATAACAATGCAGCACAGGTGACCTATGTGAACCAGTC
AGAATTGCCTTGAAGAAGGTGACAGATGGTCACCGAAACATCGGTGGAAT
AAATCTCTTGGTTGTGTAAAAAGAGTCTTTTTATTCAGTTCTTATTTTTG
TTGACGAGTGTTGATTACTCTTTGCAGTGGATGGGCCCCGCCCACCTGTC
CCCCTGTCTGGACGGACTAGTTGTAGAGTTGGACATATCGTGTAACTCCA
GCCCCCTGACATGTGTCAGGTTCAAGGTGGATGGCACGGCTATGTGTAAG
TACATCGTCAAAGTATAACATCGATAAACTCTCATTATTCTTCAACATTA
AACATTGGAGCCTTTTCAAGAATATCTTTCACGCATCGATACCTTAAGTA
TGCAAATCTCCGGTCTCTATGTGCACTTGTCTTCATTCAAAACGGTGGGT
GTTGCAAACGCTCAAGTGGTTAGGGTCATCTCTAACTTCTACTGGGTACC
ATAAGACTGCCACATTAGAAAAACGGTAATTATGTAACCGGTGATCTCAG
AGGTACGCACACTTATATCCAGGTGTTTAAGACATTCCTGATAACTCTGG
TCTCGATAACATTGTTTTTGTCAATGTTGCCGTTTTAAGGTTCCAGGTGG
AATTGTGAGCGTTCACTGTACTATCGTACTGGAAATTGTTTTATAATTAG
TCACATAGCCCTTCTACATGATATTTCTATAGTACGTGCTGTTTTATGTA
TTTGTATAAGTATAAGTATAGGTATATCACTACTACTGCTGTCAGTAAGA
TGATATAGACAAAAATTCCAGTGTCAAACAGGCTGATTGACAGATTCTTG
TGATTTGAATGTCATCATCAAATGATCTTTCATTACACATGTTAACACAG
ATGACTACCAGTTGGGATTACCCCCCTGTCTTCTCGGAAGTGATTATACG
GGTACGTTTAATATAAAACATCAAGACTATTGCAAAACTACACAGCCAAA
CTGTCAGCGCCCTTCTTACCACTTGTAGTAACAATGCTCTAGTAAGGTGG
CAATATCTGATAGCGGTAAGACCTAACTGTTGCTCTAGAAGTGTTCATCT
AACCGTTTCAAATCTGACATTTCGTTTTTAAAAATGAAATGTATATTCTA
AGTTTGGTTTTGTTTTATCTTGTTTTTCAATCGCACTTGTACATCGTGGA
TCATATTCCAATTTGAAAGTCTTAGATCATACAGATCAAGTTCTGGTCGA
TCAAACGTCTCTGCCATCGAACGGGCTTTTATGTGCTTCCAAATATCTCA
ATCAGAATAAGAACAACAATTTCCATATACACGCATTCATTTTTCCAGCA
ATAAAATTGGGTTAAACAGATCATTTTAAAACAGAAGGTTGAAAAATATG
CTGAGTAATCGTTCACATAACAGAGTGATGACTGAATAAGTTTTTTTTCC
ATCCAGGATCCGGCATGGGTCCGATGTCCATCACTCACCCAGCCACGGTC
TTGACTAGCCCACTTATAGTGACTCAAACGGACACTCTAACACCATCACC
ACCGCCAGCGTCAAACAGTAAGTATGCCATGTACCAAGGAGGCTCTATAC
AGTAGAACATACTTGTATCTACTATTAGCGATCGATACCGGACAAACATT
CTAATACTGGAAGAACGAAGTTCTATTTGATAGATCTTCCTTGATTGTAA
CTGAAGAAGATATATATGTATGGCATCCATTACATTGTGATGGATTATCT
TTAACACTGATAGAATGGCATTGAATTAATCATACCCCATATGTGTTGAA
ATTTTGCCCTTTGGTATAATAAACATTTGCCACATTTTGCATGGTAATGC
CCCATTTAGCTTTGAAAGTCCATTCCTACATCATTTCTTCCTTTTTTCAC
TGAATCGCCTCCACCACTGTGCATTCACTATTCCTATTCTGTTGTTAATT
TACAGGTAATCTGGCGATGATAATCGGTGTTGCGGTGGGTGTGGTTCTGG
CGCTAATAGTGATAGGTGTCAGTGTTGCATTCCTGTTCTACAGGGCCGGG
AAAGTTGCCGGGTAGGTTTACAGTCCATGTGTCGATACGTATAACAATGG
AAGATAGTGGATAGTTTTGATTCCTCATCGCCTCATTTTGTTCTGTAGAT
TTTTACAAACGAATTGTTTTACATTTGGCGCTGAGGTTTATTTCATAAAT
GGTTTATTGAGGTTTTAAAATGATACGGATTTGCAGAGGCCCGTGACAAG
GGTTATGAATTGTATTGTCTTTTACAAAGTCCATTGCATGCATTGGTTAC
AAAAATCTTTGTCACAGCTGCTTTTGGAACTTAACACTTAAACTCTTGTT
TGTCTAAAACTAGTCACATGGTATCGTTGAAACTTGAAACGATAATATCA
AAAGCCGGTATGGACTATGCAAGGCAGAAGTTACTCTTCATTGATAGTAT
ACTTATATTACTAAAATCATTTTTTGAACGTACACTTATTCCTTTTTCAT
TCATGATATATTACAATAAACCACGTATCTGTTGAAACTTATCTATATCG
TCACTTTCTTATTTTGTAGGAGACAACGGAGCACAATGAGAACCCACCTG
GTACGTGTTTTATTTCTTGATCTTAAAACTTACCGAAACATACTTCTTTG
TGTCTTGCCTCAGACGTCTGTATTCCAATGTCGAATGCACCGAACTGGAG
GACGTAGACTAGCCGAGAAAGGAGCACAAATGTGAGAAAGAGTGAATGAA
TCAAAAGATTGTGCATGAAGACATTTAGATACTTAACGTCATTTTTTTTA
TTTGTCTTGGGTGATCTATCTAGTTAATGAATATCAGTTTTCTTTACTTG
GGTGATTCTTGTCATGGTTGAACTATTTTAGCAATTTTGAATTTGATGTA
CCAAAAAATACTGGAATAGCATTTTAGTACATGTTTAAATAACCTAGTTT
ATGTATCTCATTGTTCAATGTCAGACAGTATATTGTTTTCAGTGTGGAGA
TCTGCAACCTATTGTTCAAAGATATCACATTTCTGCTGTAGTACCATCCT
AGGGAATAAGTGTATTTCCTTATGTGTATCCGTAGCCTGCCAGTGCAAGG
AGGAAAAGCGGTGTAGCCAACCCCGCCTACTCGTCACAGGCTGGGCGGAA
GGGCTCGAGCGTCCCCCCGCCCGTCCCGCCTCGTCCGGGGGAGGAACCCA
ACTACTACAGCTCCGCCGACCCCGAGGATATCTACATGGAGCTGGACGGG
ACTCAGCAGCGCAGCCTGTATAGAAAAGGCACATCGCAAGGGGGCGCTTA
TACCTCGTTGAATGCAGGTTTGCCGGGGGAGAAAGACAAAGGGGACGCCA
GCAAAGGCCCCGAACCGCCCGCCCCACCGCCAGTCGGATCTATACCAGGC
TACGAGGGTGTGTACGTGGAACCACAGGCTGGGAAGGCAGATACTGCCGC
TGATACAGACTATGAAGGCTACATGACGCCAACATCTGAAGGAAATGAGT
ACATAGACTTGAATGGAGGGTCTTCAAACTTGTGA Coding sequence (CDS) from alignment at Sc0000086:1134053..1140837+ >Blg00360.0 ID=Blg00360.0|Name=Blg00360.0|organism=Branchiostoma lanceolatum|type=CDS|length=1392bp|location=Sequence derived from alignment at Sc0000086:1134053..1140837+ (Branchiostoma lanceolatum)
ATGACCGGAAATGACGTCATTCTACGGTTCATTGGTGCAGACAACACCGG
TGAAACAAGTAAGATAAGAAAACCGAACGTCGAATCGAATAACCAGCGCT
ACTGTCACGACAACTGCTCGGCGAAGGAAGCAAACTTTGTGGGGAAGTTC
ACGTTCGACGGCGGTGTGGAGCAGTGTGCTTGTAAGTGTCGCCAGAACAC
TCACGTATTCGACGTCAACAGACAGGTGTGCGACAATACGGAGCTATCCG
CAGGTAACAACCAGACGTGTCAGGTGACGGTTGGAGATGCTCTCTATCAG
ACCCTTGAGATCCCGCTTGGCCAGTCGTCAGTGTTCCTCCAGCCAAGAAG
AGCGTTACGTCTCAGCGGCAATTTCCTGACGCAAGCGCAGTCATGTCAAG
TCACAGACGAGTTCTACCAGGACAGAACGGCTATGTGGCCGCTGGACTAC
ATCTTCAGCTCTAGCTCGGCGAGCGGACCATTCTTCAAGCTGAGCGCACG
TTCAGATGGATACATGTACATTAAGTGGATGGGCCCCGCCCACCTGTCCC
CCTGTCTGGACGGACTAGTTGTAGAGTTGGACATATCGTGTAACTCCAGC
CCCCTGACATGTGTCAGGTTCAAGGTGGATGGCACGGCTATGTATGACTA
CCAGTTGGGATTACCCCCCTGTCTTCTCGGAAGTGATTATACGGGATCCG
GCATGGGTCCGATGTCCATCACTCACCCAGCCACGGTCTTGACTAGCCCA
CTTATAGTGACTCAAACGGACACTCTAACACCATCACCACCGCCAGCGTC
AAACAGTAATCTGGCGATGATAATCGGTGTTGCGGTGGGTGTGGTTCTGG
CGCTAATAGTGATAGGTGTCAGTGTTGCATTCCTGTTCTACAGGGCCGGG
AAAGTTGCCGGGAGACAACGGAGCACAATGAGAACCCACCTGCCTGCCAG
TGCAAGGAGGAAAAGCGGTGTAGCCAACCCCGCCTACTCGTCACAGGCTG
GGCGGAAGGGCTCGAGCGTCCCCCCGCCCGTCCCGCCTCGTCCGGGGGAG
GAACCCAACTACTACAGCTCCGCCGACCCCGAGGATATCTACATGGAGCT
GGACGGGACTCAGCAGCGCAGCCTGTATAGAAAAGGCACATCGCAAGGGG
GCGCTTATACCTCGTTGAATGCAGGTTTGCCGGGGGAGAAAGACAAAGGG
GACGCCAGCAAAGGCCCCGAACCGCCCGCCCCACCGCCAGTCGGATCTAT
ACCAGGCTACGAGGGTGTGTACGTGGAACCACAGGCTGGGAAGGCAGATA
CTGCCGCTGATACAGACTATGAAGGCTACATGACGCCAACATCTGAAGGA
AATGAGTACATAGACTTGAATGGAGGGTCTTCAAACTTGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00360.0-exon-Sc0000086-1570713199:1134053..1134127 | Blg00360.0-exon-Sc0000086-1570713199:1134053..1134127 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1134308..1134485 | Blg00360.0-exon-Sc0000086-1570713199:1134308..1134485 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1136404..1136675 | Blg00360.0-exon-Sc0000086-1570713199:1136404..1136675 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1137480..1137597 | Blg00360.0-exon-Sc0000086-1570713199:1137480..1137597 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1138203..1138253 | Blg00360.0-exon-Sc0000086-1570713199:1138203..1138253 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1138759..1138869 | Blg00360.0-exon-Sc0000086-1570713199:1138759..1138869 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1139258..1139363 | Blg00360.0-exon-Sc0000086-1570713199:1139258..1139363 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1139872..1139902 | Blg00360.0-exon-Sc0000086-1570713199:1139872..1139902 | Branchiostoma lanceolatum | exon |
| Blg00360.0-exon-Sc0000086-1570713199:1140388..1140837 | Blg00360.0-exon-Sc0000086-1570713199:1140388..1140837 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:1134053..1140837 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00360 |
|
