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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:375934..383640- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00355.1 ID=Blg00355.1|Name=Blg00355.1|organism=Branchiostoma lanceolatum|type=mRNA|length=7707bp|location=Sequence derived from alignment at Sc0000086:375934..383640- (Branchiostoma lanceolatum)
CTCCAAGATGGCGGCGCCCATGAGGGTTGCAGCGCGAGCTATTTCATTAT
ATAAAGGTAAGATATTTTTGGTCACAAATTGGTCGTATTCTTATATGAAT
ACCTCGTTTTCTTTGTGTAACGATTTCTTGAGGTTTTAATGATTCATTAA
TACTGCAGTTTGTTTTCCAAGACATAGGGGAAATGAACAAAATACCTGCC
AGTGTGCAAGGGTCACGGAGGGGGAGGGGGGCGTTTCAAGTCGAAGCCAA
CTTTACCCGTGTTTGTTTGATTAATAATCTCCGTGTACATGACATTATCA
TGTTTTGATTGTCAGCTAATCATTGCCTTTAAAGGCTAGTGGTATTATTA
AAATTTAGATGAGTTGTGCTTGTCACTTTTTTCATAACTTCATAACTTGC
TAGTACATGATATCATAATATCAATATGTCAGCATCTTTCCTCAATTTTA
TCTTACCCTTTAAAAATACTGTATAATAATGTCCTTGATAATACATGATA
CCAAACACATACAATATGGTTATCTTATCCACAATTGTAGTAAGTATCAT
AAGCTCTTTCACAGATCTGACTGTGCATGTTTAGATCAGAGGTGAAGGTC
CCAAAGATATGAACGAAACACATTTGGAGATTCTTTTGCAATCCGACAGA
ACAAGGCCATATATCCTAAGACATGTGTAAAACATGGTCGAGACAAGAAC
TGTTTACAAGTCAGGGGACTTCACCTTAGACCAGCACATGCACAGTTGGA
TCTGTGAAAGAGCTTATATAGAAAGACTACAGGTATATCGTGTATGCATG
TATTCATGTATACCATGTTGTATTTCAGATGTATCTATAGTGAGGAGTGT
GTCAGTCATCCCCTCTGTATCAGGGAAGGTACTGATGACATCACAGATGA
ACCAACCAACCAGCATCCAGCCCTGCAGACATGTCAGCTTCATCAATAAG
TGTAGGTGTTATACTGGTGTAACTCTCTTAATTTCATTTCATTTTATTCC
TTTGTTTTACCAGAAGAATCACACACTTAGGTCCCTTGACCTGCTCTTCA
GGTGTCCCTGGTTACATACATATACATTACATAATCATTTGAACATTGAT
GACCATGAAAATCAATAAAAAGAGTTGTTAGAATAGTTTTGTTACCTATT
ACTCAGTCTATAGACATCTTTTTTTTAATGTTCATACAGACTGTCAAAAT
GTAAGACTTCTGACAACATGCATTTCAACATAAAAAGAAAACAAGAATTA
CATTTCAGATGATATAAAAACAACCTGGCAGTTTCAATGTTTCATCGTAG
TCCAGGTCAGTTGATTATAACACATGTGCCAAATTTTGTACAGTACACAC
GGACGGCCATACATGTTTGTTTTGCTATATGCTGGTTACTTACATGTATT
TTCTTGTCTGTCCAACACAGTAACTGCTGACCAGCTGTGGAAAGGTGTTT
TAGCTGAAGGTTCGGGAGCTCTGAGACGAGCTAGAGGCAAGAGAACCAAG
AAGAGGACCAAGAGAGACCTCAACATTGGCCAGATCATCGGTGAAGGTGT
GTAGATTTTGTGGCAATCAACATTTATAAACGTGTTTGCATGCAACTGTT
ATCGTAATTTAAGGGTTCCAGTCCTTTGCAAGTGATGTTAAACTGTTGAT
GCCTAGCTTGAGGAGAGCTACACCTCAAGAAAGTTAAAGAACCCATCATA
GGTATTGACAAGAGTAGGTGTATATGTTAATCATATGAATCTCCTTTTTT
CACACAGCTTGATCAGAGTTCACACGATGTGTTATATATTAAGGCTGTTT
ATTGGTTATGCAAACAAAGAAACATGTAAAAATGCAAATTGGAAGTACAG
TCAAACCTGCCTAGGCGACCACCTTTTCAACGCGACCACCTGGCCATGGC
GACCGCTTTTTCTCGGTCCCGAAAATTTTCCCCATAGGCACAAGCATTAA
GCTGCCTGCCCAAGGCGACCACCCGTCCAACGCGACCGCGACTGCCACGA
ATTGGGACCGCACAGAGCACAATCCCTGCTCATGGCGACCACATTTTTCC
GGCGTGTGGTGACATCGAATTTTGCTGTTGGATTTCGCTGAAATTTTTTT
AAGACCTTGACGGACAAAAATATATCAAAAGCATTGATTCCTCCATGAAG
TGTTTTAATGAAACGTTCCCACTATAAACATTATAAATACAAAGGATTGT
GAATACAACTTGGATATCGATGTTGTTGTGCCCATCGTCATCTTATAGTT
TACCGCAAGCTTGGTTCGGTTTGAACTCAATTTTCAAAACGATCACGTAG
TGCATGGCGTCAAAAAGTCAGATTTCACAGAAATTACTTTCTATTTCTTG
TATTTTCAACAAAAATGTGTCTCTGTCTTACTAAATTCTGCCGGAAAATG
ACGTTGGCCGAGACATGTTGTTTCTTGGTCCGCGACGCCATCTTGTTTCA
GCGCAGCATAACGCTGACTTTTCTAAAACACGACGCTTCTGTGTATGAAT
ATTTAGAATACTCTCCTAATCGATGAAAATTAATATTCTTATATTCTTGT
TATTTCCATGACTCTCACAAACCTTTATTGGGCGCTGCTTGCTTGTAATC
GCCGACGCTGTGCGTTCTGCTGCACTGTTACCTTTCGATGCGGTCGCGTG
CTCGGCGGCGGTATCACAACTTTCCGTTTTCATCCTTCAGTTGTCAGATC
GAAAACTTTTTGCCGCTTTAATCCAGCGGTCGGCTCCCAAAAGAAGGCTG
GGATTTTCTAGGGATTTGGCTCAGGCCTTAAAACCAAGATTTTATACGCG
CGTGTGTGTGTGTACTCTAACTTTAACGTAACGTGTGAATGTGGGAGGAC
GCTGCAAGGTCATCGAGGCAGACATTGTTTTTAGTCAAAATTACGACGAA
CATTTGTTCACGATGTAACGGTATACAAATATTACAATGATAACAGAAAA
TGCAATTTCTGTAGGATCTTTCTGTCAATGAGAACTGAACCTGCACTGGT
GGGGGTCATGCTGTCTAAAATCACATAATTTTCCATCCATCTACGTGGTA
CACGGTATTTGAACACCTCGAGCTGGAAACATGTTATGATAGGAATCCTC
TTCATGGCGACCACCTGTCCATCACGACCGTTTTTGCTCGGTCCCCCGGG
TGGTCGCCTTGGGCAGGTTTGACTGTACAATCAAGCAGTTGCAATATTGA
AGTTTTTCTGAGCACTGTAACGTTTCATCTTTTAGGAAAAGACGCGTACG
TGTGGCCAGGTCTGAACGCTCCGGTGATGACGGCCGGAATGGTCCACGGG
ATCCAGAAGAAGGACAACGACCCCGAGAGAGAGAAGAAGCTGATCGAGGA
GAGAGATGCGTGGTACAAGATGAAGTCCAAGCGGTTGAAGAGGCAGCGAG
GATGGACCGGTGGAACATTAGGGGGCACCAGCCTGGGGTCACCTGATCCT
ATTGGCAACAGTAAGAACGAATATCGTATACATTTGTATAATTGCTTGGG
CTGTCTTTTTCCTTTTTGTGACACTCTTTTAGGTTTAAAGAGGGTCGACT
TGACCATGTCTTTCTTAATTTACAGGAACTTTTGAAGACTTTGAAGCAAG
GGTATTAGAGGTAAGCATCTATATAATAACACACATGGCAGTGCTTGAGC
TATCTAATACCTTTACCAAACAAGATGTCAATAGGATTGTTTTTTATTTG
ATGGAACTGTCATGTTGCCATACTTAACTAACACATTGTTTTGTTGTCTG
ATTTTTTATCTTGTATCTTCCGTTACTGTTTGACTGTTAGAAAAATCACT
GTTTGGCCAGCATTTCCAAGTTTAAGTTAAGTATATGTGTATCTACATGA
ACATCTAGAATTCATGTACATTAAAGGGTGAACTGGTAGAAACGTATCAG
CATGTTAGAACTAAAAGTATAACGTCTGTGAGATGCAGTCTAAAGGTAAC
AAAAAACAAATTCGCAAACAATAATAAGTTACTTTTCCAGATGCAGCCCT
AGGATTTGTAAATCATGTCTACTTGTGGATACTTGAGTTGATGGTATATT
GCGTTGTTGTACAATACAGATGCGTAACGTGTTCAACATGACAGCTAACA
TGGGCAGGAAGAGGTCTGTCCGAGCCCTGGTGGTGGTGGGCAACAGGAAG
GGAGCTGCAGGTGAGATGGGAACTTGTACTTACATATTAGCAAGCTCTTA
GTGATATCAGTTTTTATATAGGCACATTTTTACATTCAAAAACTGCTTTC
GCTATAGAATTGTTTTAATACTCAGTACTTGAATAAGTCAGCATTTCGGA
AATACTTTTTAAGTAATCTGACGTGGGTACATAAATGTCCAACTTATGCT
TATATTGTTGTTGTTTCTCTTTATCTGGTAGGATTTGCCGTTGGAAAAGC
TCTAGATGCCAGAACAGCTCTGAAAAAGGTAAGAGGCAATGACATCATGA
CATGACTCTTTGGATATCTAAGGTAAGCTAATGAAAGCAAGACATGATGT
TTTTACTACATTTGCTTATTGTCACATGACGTGTTCATATACTCATGATA
TGGCAGATAAGGCTATAAGCATACAACAATGATATGCGTGAACCACCCAG
ATGACTTGATAAATTTGATATCTTATCAAAGATCTACTTTGTTAACAGGC
AAAGAACAAGGCAGTGAATGTGCTGTACTACATTGAGAGGTACAATAACC
ATACAAGTAAGTTTTCACCTCCATCTTGTCTCTTATAACACAGGCCGTGT
ACATGTACTAGTACCTACAGCATTGTACAACTTGATAGGGAGTTGTGATT
CCCTTTGATTTAAGCTTGTTGGACCTTTTGAAAGTCATCATAGTACCTGT
GGTATTAGGCTCCTGGCAACTTAGTAAAACCTATGCAATTACGTCAGCAT
TTTGTCTGTGATGTATTTCTGATTTCTATGAGTTCTTCTGATGCCATCCT
CTACTTTCCAGTCTACCATGACATTGACGTGACCTTCCAGAACACCAGAA
TCAAAATGAGGAAGCAAAACAGAGGTGGGTTGTAATCTTCATTCTTGTGT
GTTCTATTCAGTGTAATTCTCTTATCTTTTACAATGTCACCATTATGATT
GGAACAGTTTGAAAACCTCTGTGATAGTAAATAAATTGAAACAAAGTCAA
AATACATTATTTGCTTTAGATGGAAATCATCATAACTTTAGTATGTTTCA
TATCCCACATGTTGTTGTGATCATGTCTAATACATGTAGTAGCAGAAGTT
CGGTTGATGTGTGTTACAGAGTTGACCCTGTGTATGTGCTGCTTTTGTGT
AGGTTATGGCCTGCAGTGTCACAGGATTCTGCAGACGTGTGGCCGGCTCA
TCGGACTGGAAGACGTGTATGCTCGGGTCCTGGGCGCCAAAAACCCCCTC
AGTATCGTCCACTGTTTTTTCAAGGGACTGACCAAAGAACAGGTAATTAA
TAACATTGTCCTACATTTACATGTAGGCATGTTGTATTTTTGCCAGTATG
TTTGATGTGAACGTATGATTTTGTCTAATGATTACGGTATAGTCCATTCT
GCTGGATATTGAATACAAAAGGATATGTAGCTTTTAATTTTCATGGCCAG
TCATTGGTTGTCTGCAGAGAAATGCTAAGTATTAGCATTTGTATAGGACA
ATGGTTTGTTATGATTTTGGTACATGTAGCTACAAAAGGTATTTGTAATA
ACCATTAAAGGAGCAGTAAACTCCAGAAGGAGGTACTTTTTACTTCCAAT
GGATTATAATTTTAGGAAGTAAAACGTATCCACTAGTCCCATGCATATCA
AAAAGCATGCAGTATTCTACTAAACTCCCAAAGTATCCTCTAAGCAATCT
CAGCCTATGGGTGAATTCAATGTGCCTAACAAAAGTTTGGTTACAGACAA
GATTTCAGGGGAGATGAGAAAAACTTGTTGTTGTATGTTCATGTGTCATT
CATGTTGACCCTCTGTGTCCTCAGGAAACCCACCAGCAGCTGGCTGACAG
GAAAGGCCTCCACGTGGTGGAGTTCAGACAGGAGTGCGCCATGCGGCCCA
TCGTGGTGGCCTCGCCCAGCGACGGGAAGGTCCGCGAGGAACCCGAGCTA
GAGGACGACATCCCCGACATCAAACTGGACATCAAGGATGTGAAGAAGAA
GGAAGGAACTTACACGAGTCCCTGGGAAGGCATCTATAGGAAAGAGTATA
GATTCTAAGATGCCAAATGTAATCGTAGTTAAAGCTTCTACACTTTACCA
CTGAGTAGTTGCAGCTACTAGTGGTAGATATATACATTCATCTTTCAAGG
ATGGTTGCATGTTTTTGTCAATTTCTTTGCTGTCATTGTGGTGTATAGCA
ATCTGTACTTCTGCCATCCATGTGTCAAATGCTGAACCACATATTGAAAA
GACAGATATTTCCATGTACAACTTGATATATCCAATTCTGTCATGATTTG
ACTTGTGTGCAAAGCAGTCCACTACTTCTGTATCCATTTAGCAGTGGACT
TTTATTCAAGCTCAAGCGTTTGTAGTATCTTTTAGGTTGAAGCAATAGTA
GTAACACAGTCAATAATAGAATATATGTTTGCATTGTGATGAGTACATGG
CAAAAACTACCACCTTAAGAACTGTATGACTATGTGAACACAATAGGCAA
GAATGAAGAACATAGCTCAATTTCTTGTTTTATTGCTAAATCAACGTCTA
ATTCACTACAGTCATTGTAGCACCTATTGCTAGACTTCAGTGACAGTAAC
ATACAATTTACAAATCCCTCTTCTCATGTGATGCAAGGTACAAGGTACAC
TCTGCAGTTATAATATATGCTGAATCTTCTTCCAATTCACTGGTCTCAAG
TTATTACCTCTCTTTAAGTATTCTTAGAATTCATCTTAACAGAAGGTATT
TCATAAATTGCAAAGTTGCTTTGCAACATGTTAAGCACCAAGATGCTTTT
TTTAATGTCAACTAGACATTACTACAAGCTCTGTTACTACATTCTCTGAT
AGCCAATCCAGCACTTGTACAGACATGCTCACAAAACAAGCGATTAACAA
CATTATTCAATTTGCAACCATAACCAGAAGGATCCATCTATTAAGCTGAC
ATTATAATTATTTGTGGTTTCGTAACATTTGCTAGCTGGGTTTATCTCAT
ACCACATCTTTCAAGTATTCATTGACAATAAAGTCATGGGTATGAAATAG
ACCATGTACATGAAGTTCTTATTTTTGAAAAGCAAAGTCTACCATTCTAC
TCGTTATACTTTGCTACTCGTACAATACTGCAAACGTAAGAATGTGTGTT
GGATATCCCTGCCAGAGAGGAAAAGAAACGTTGACCATTCCCTGTTATAC
TGTAAGGGGAAAAATCAACATGCCCACAATATACCCTATTAACACACAAA
GTTCATTCACCATTATTAAAATCTCATGCATCGTTTATGGCTATCGAGTA
ATTTTATTATGCCAAGAAATATTTGGCATATCCTGTCTTCACTGACCTAA
ATAGCATATGCCTGCTATGAGTGTAAGAATTTACTTTTATCACTTGATTA
ATCTTTGTTGCTGAGAAGACATTGTTGATATAACCACATTTCTGCTGTCT
TGCTATTTCCGGATTTTTCAGCTTGTTTCTTACTGTGACAGTGGTTTTAA
TTGAATCTTGTGTACTGTTGCAAAAGAAGGTTCTTATTTAGACGTAGGAG
CTTCGTC Coding sequence (CDS) from alignment at Sc0000086:375934..383640- >Blg00355.1 ID=Blg00355.1|Name=Blg00355.1|organism=Branchiostoma lanceolatum|type=CDS|length=1191bp|location=Sequence derived from alignment at Sc0000086:375934..383640- (Branchiostoma lanceolatum)
ATGGCGGCGCCCATGAGGGTTGCAGCGCGAGCTATTTCATTATATAAAGA
TGTATCTATAGTGAGGAGTGTGTCAGTCATCCCCTCTGTATCAGGGAAGG
TACTGATGACATCACAGATGAACCAACCAACCAGCATCCAGCCCTGCAGA
CATGTCAGCTTCATCAATAAGTTAACTGCTGACCAGCTGTGGAAAGGTGT
TTTAGCTGAAGGTTCGGGAGCTCTGAGACGAGCTAGAGGCAAGAGAACCA
AGAAGAGGACCAAGAGAGACCTCAACATTGGCCAGATCATCGGTGAAGGA
AAAGACGCGTACGTGTGGCCAGGTCTGAACGCTCCGGTGATGACGGCCGG
AATGGTCCACGGGATCCAGAAGAAGGACAACGACCCCGAGAGAGAGAAGA
AGCTGATCGAGGAGAGAGATGCGTGGTACAAGATGAAGTCCAAGCGGTTG
AAGAGGCAGCGAGGATGGACCGGTGGAACATTAGGGGGCACCAGCCTGGG
GTCACCTGATCCTATTGGCAACAGAACTTTTGAAGACTTTGAAGCAAGGG
TATTAGAGATGCGTAACGTGTTCAACATGACAGCTAACATGGGCAGGAAG
AGGTCTGTCCGAGCCCTGGTGGTGGTGGGCAACAGGAAGGGAGCTGCAGG
ATTTGCCGTTGGAAAAGCTCTAGATGCCAGAACAGCTCTGAAAAAGGCAA
AGAACAAGGCAGTGAATGTGCTGTACTACATTGAGAGGTACAATAACCAT
ACAATCTACCATGACATTGACGTGACCTTCCAGAACACCAGAATCAAAAT
GAGGAAGCAAAACAGAGGTTATGGCCTGCAGTGTCACAGGATTCTGCAGA
CGTGTGGCCGGCTCATCGGACTGGAAGACGTGTATGCTCGGGTCCTGGGC
GCCAAAAACCCCCTCAGTATCGTCCACTGTTTTTTCAAGGGACTGACCAA
AGAACAGGAAACCCACCAGCAGCTGGCTGACAGGAAAGGCCTCCACGTGG
TGGAGTTCAGACAGGAGTGCGCCATGCGGCCCATCGTGGTGGCCTCGCCC
AGCGACGGGAAGGTCCGCGAGGAACCCGAGCTAGAGGACGACATCCCCGA
CATCAAACTGGACATCAAGGATGTGAAGAAGAAGGAAGGAACTTACACGA
GTCCCTGGGAAGGCATCTATAGGAAAGAGTATAGATTCTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00355.1-exon-Sc0000086-1570713199:383585..383640 | Blg00355.1-exon-Sc0000086-1570713199:383585..383640 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:382690..382812 | Blg00355.1-exon-Sc0000086-1570713199:382690..382812 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:382095..382220 | Blg00355.1-exon-Sc0000086-1570713199:382095..382220 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:380181..380405 | Blg00355.1-exon-Sc0000086-1570713199:380181..380405 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:380031..380065 | Blg00355.1-exon-Sc0000086-1570713199:380031..380065 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:379481..379571 | Blg00355.1-exon-Sc0000086-1570713199:379481..379571 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:379213..379259 | Blg00355.1-exon-Sc0000086-1570713199:379213..379259 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:378935..378992 | Blg00355.1-exon-Sc0000086-1570713199:378935..378992 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:378617..378679 | Blg00355.1-exon-Sc0000086-1570713199:378617..378679 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:378199..378338 | Blg00355.1-exon-Sc0000086-1570713199:378199..378338 | Branchiostoma lanceolatum | exon |
| Blg00355.1-exon-Sc0000086-1570713199:375934..377666 | Blg00355.1-exon-Sc0000086-1570713199:375934..377666 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:375934..383640 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00355 |
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