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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:375934..383639- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00355.0 ID=Blg00355.0|Name=Blg00355.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7706bp|location=Sequence derived from alignment at Sc0000086:375934..383639- (Branchiostoma lanceolatum)
TCCAAGATGGCGGCGCCCATGAGGGTTGCAGCGCGAGCTATTTCATTATA
TAAAGGTAAGATATTTTTGGTCACAAATTGGTCGTATTCTTATATGAATA
CCTCGTTTTCTTTGTGTAACGATTTCTTGAGGTTTTAATGATTCATTAAT
ACTGCAGTTTGTTTTCCAAGACATAGGGGAAATGAACAAAATACCTGCCA
GTGTGCAAGGGTCACGGAGGGGGAGGGGGGCGTTTCAAGTCGAAGCCAAC
TTTACCCGTGTTTGTTTGATTAATAATCTCCGTGTACATGACATTATCAT
GTTTTGATTGTCAGCTAATCATTGCCTTTAAAGGCTAGTGGTATTATTAA
AATTTAGATGAGTTGTGCTTGTCACTTTTTTCATAACTTCATAACTTGCT
AGTACATGATATCATAATATCAATATGTCAGCATCTTTCCTCAATTTTAT
CTTACCCTTTAAAAATACTGTATAATAATGTCCTTGATAATACATGATAC
CAAACACATACAATATGGTTATCTTATCCACAATTGTAGTAAGTATCATA
AGCTCTTTCACAGATCTGACTGTGCATGTTTAGATCAGAGGTGAAGGTCC
CAAAGATATGAACGAAACACATTTGGAGATTCTTTTGCAATCCGACAGAA
CAAGGCCATATATCCTAAGACATGTGTAAAACATGGTCGAGACAAGAACT
GTTTACAAGTCAGGGGACTTCACCTTAGACCAGCACATGCACAGTTGGAT
CTGTGAAAGAGCTTATATAGAAAGACTACAGGTATATCGTGTATGCATGT
ATTCATGTATACCATGTTGTATTTCAGATGTATCTATAGTGAGGAGTGTG
TCAGTCATCCCCTCTGTATCAGGGAAGGTACTGATGACATCACAGATGAA
CCAACCAACCAGCATCCAGCCCTGCAGACATGTCAGCTTCATCAATAAGT
GTAGGTGTTATACTGGTGTAACTCTCTTAATTTCATTTCATTTTATTCCT
TTGTTTTACCAGAAGAATCACACACTTAGGTCCCTTGACCTGCTCTTCAG
GTGTCCCTGGTTACATACATATACATTACATAATCATTTGAACATTGATG
ACCATGAAAATCAATAAAAAGAGTTGTTAGAATAGTTTTGTTACCTATTA
CTCAGTCTATAGACATCTTTTTTTTAATGTTCATACAGACTGTCAAAATG
TAAGACTTCTGACAACATGCATTTCAACATAAAAAGAAAACAAGAATTAC
ATTTCAGATGATATAAAAACAACCTGGCAGTTTCAATGTTTCATCGTAGT
CCAGGTCAGTTGATTATAACACATGTGCCAAATTTTGTACAGTACACACG
GACGGCCATACATGTTTGTTTTGCTATATGCTGGTTACTTACATGTATTT
TCTTGTCTGTCCAACACAGTAACTGCTGACCAGCTGTGGAAAGGTGTTTT
AGCTGAAGGTTCGGGAGCTCTGAGACGAGCTAGAGGCAAGAGAACCAAGA
AGAGGACCAAGAGAGACCTCAACATTGGCCAGATCATCGGTGAAGGTGTG
TAGATTTTGTGGCAATCAACATTTATAAACGTGTTTGCATGCAACTGTTA
TCGTAATTTAAGGGTTCCAGTCCTTTGCAAGTGATGTTAAACTGTTGATG
CCTAGCTTGAGGAGAGCTACACCTCAAGAAAGTTAAAGAACCCATCATAG
GTATTGACAAGAGTAGGTGTATATGTTAATCATATGAATCTCCTTTTTTC
ACACAGCTTGATCAGAGTTCACACGATGTGTTATATATTAAGGCTGTTTA
TTGGTTATGCAAACAAAGAAACATGTAAAAATGCAAATTGGAAGTACAGT
CAAACCTGCCTAGGCGACCACCTTTTCAACGCGACCACCTGGCCATGGCG
ACCGCTTTTTCTCGGTCCCGAAAATTTTCCCCATAGGCACAAGCATTAAG
CTGCCTGCCCAAGGCGACCACCCGTCCAACGCGACCGCGACTGCCACGAA
TTGGGACCGCACAGAGCACAATCCCTGCTCATGGCGACCACATTTTTCCG
GCGTGTGGTGACATCGAATTTTGCTGTTGGATTTCGCTGAAATTTTTTTA
AGACCTTGACGGACAAAAATATATCAAAAGCATTGATTCCTCCATGAAGT
GTTTTAATGAAACGTTCCCACTATAAACATTATAAATACAAAGGATTGTG
AATACAACTTGGATATCGATGTTGTTGTGCCCATCGTCATCTTATAGTTT
ACCGCAAGCTTGGTTCGGTTTGAACTCAATTTTCAAAACGATCACGTAGT
GCATGGCGTCAAAAAGTCAGATTTCACAGAAATTACTTTCTATTTCTTGT
ATTTTCAACAAAAATGTGTCTCTGTCTTACTAAATTCTGCCGGAAAATGA
CGTTGGCCGAGACATGTTGTTTCTTGGTCCGCGACGCCATCTTGTTTCAG
CGCAGCATAACGCTGACTTTTCTAAAACACGACGCTTCTGTGTATGAATA
TTTAGAATACTCTCCTAATCGATGAAAATTAATATTCTTATATTCTTGTT
ATTTCCATGACTCTCACAAACCTTTATTGGGCGCTGCTTGCTTGTAATCG
CCGACGCTGTGCGTTCTGCTGCACTGTTACCTTTCGATGCGGTCGCGTGC
TCGGCGGCGGTATCACAACTTTCCGTTTTCATCCTTCAGTTGTCAGATCG
AAAACTTTTTGCCGCTTTAATCCAGCGGTCGGCTCCCAAAAGAAGGCTGG
GATTTTCTAGGGATTTGGCTCAGGCCTTAAAACCAAGATTTTATACGCGC
GTGTGTGTGTGTACTCTAACTTTAACGTAACGTGTGAATGTGGGAGGACG
CTGCAAGGTCATCGAGGCAGACATTGTTTTTAGTCAAAATTACGACGAAC
ATTTGTTCACGATGTAACGGTATACAAATATTACAATGATAACAGAAAAT
GCAATTTCTGTAGGATCTTTCTGTCAATGAGAACTGAACCTGCACTGGTG
GGGGTCATGCTGTCTAAAATCACATAATTTTCCATCCATCTACGTGGTAC
ACGGTATTTGAACACCTCGAGCTGGAAACATGTTATGATAGGAATCCTCT
TCATGGCGACCACCTGTCCATCACGACCGTTTTTGCTCGGTCCCCCGGGT
GGTCGCCTTGGGCAGGTTTGACTGTACAATCAAGCAGTTGCAATATTGAA
GTTTTTCTGAGCACTGTAACGTTTCATCTTTTAGGAAAAGACGCGTACGT
GTGGCCAGGTCTGAACGCTCCGGTGATGACGGCCGGAATGGTCCACGGGA
TCCAGAAGAAGGACAACGACCCCGAGAGAGAGAAGAAGCTGATCGAGGAG
AGAGATGCGTGGTACAAGATGAAGTCCAAGCGGTTGAAGAGGCAGCGAGG
ATGGACCGGTGGAACATTAGGGGGCACCAGCCTGGGGTCACCTGATCCTA
TTGGCAACAGTAAGAACGAATATCGTATACATTTGTATAATTGCTTGGGC
TGTCTTTTTCCTTTTTGTGACACTCTTTTAGGTTTAAAGAGGGTCGACTT
GACCATGTCTTTCTTAATTTACAGGAACTTTTGAAGACTTTGAAGCAAGG
GTATTAGAGGTAAGCATCTATATAATAACACACATGGCAGTGCTTGAGCT
ATCTAATACCTTTACCAAACAAGATGTCAATAGGATTGTTTTTTATTTGA
TGGAACTGTCATGTTGCCATACTTAACTAACACATTGTTTTGTTGTCTGA
TTTTTTATCTTGTATCTTCCGTTACTGTTTGACTGTTAGAAAAATCACTG
TTTGGCCAGCATTTCCAAGTTTAAGTTAAGTATATGTGTATCTACATGAA
CATCTAGAATTCATGTACATTAAAGGGTGAACTGGTAGAAACGTATCAGC
ATGTTAGAACTAAAAGTATAACGTCTGTGAGATGCAGTCTAAAGGTAACA
AAAAACAAATTCGCAAACAATAATAAGTTACTTTTCCAGATGCAGCCCTA
GGATTTGTAAATCATGTCTACTTGTGGATACTTGAGTTGATGGTATATTG
CGTTGTTGTACAATACAGATGCGTAACGTGTTCAACATGACAGCTAACAT
GGGCAGGAAGAGGTCTGTCCGAGCCCTGGTGGTGGTGGGCAACAGGAAGG
GAGCTGCAGGTGAGATGGGAACTTGTACTTACATATTAGCAAGCTCTTAG
TGATATCAGTTTTTATATAGGCACATTTTTACATTCAAAAACTGCTTTCG
CTATAGAATTGTTTTAATACTCAGTACTTGAATAAGTCAGCATTTCGGAA
ATACTTTTTAAGTAATCTGACGTGGGTACATAAATGTCCAACTTATGCTT
ATATTGTTGTTGTTTCTCTTTATCTGGTAGGATTTGCCGTTGGAAAAGCT
CTAGATGCCAGAACAGCTCTGAAAAAGGTAAGAGGCAATGACATCATGAC
ATGACTCTTTGGATATCTAAGGTAAGCTAATGAAAGCAAGACATGATGTT
TTTACTACATTTGCTTATTGTCACATGACGTGTTCATATACTCATGATAT
GGCAGATAAGGCTATAAGCATACAACAATGATATGCGTGAACCACCCAGA
TGACTTGATAAATTTGATATCTTATCAAAGATCTACTTTGTTAACAGGCA
AAGAACAAGGCAGTGAATGTGCTGTACTACATTGAGAGGTACAATAACCA
TACAAGTAAGTTTTCACCTCCATCTTGTCTCTTATAACACAGGCCGTGTA
CATGTACTAGTACCTACAGCATTGTACAACTTGATAGGGAGTTGTGATTC
CCTTTGATTTAAGCTTGTTGGACCTTTTGAAAGTCATCATAGTACCTGTG
GTATTAGGCTCCTGGCAACTTAGTAAAACCTATGCAATTACGTCAGCATT
TTGTCTGTGATGTATTTCTGATTTCTATGAGTTCTTCTGATGCCATCCTC
TACTTTCCAGTCTACCATGACATTGACGTGACCTTCCAGAACACCAGAAT
CAAAATGAGGAAGCAAAACAGAGGTGGGTTGTAATCTTCATTCTTGTGTG
TTCTATTCAGTGTAATTCTCTTATCTTTTACAATGTCACCATTATGATTG
GAACAGTTTGAAAACCTCTGTGATAGTAAATAAATTGAAACAAAGTCAAA
ATACATTATTTGCTTTAGATGGAAATCATCATAACTTTAGTATGTTTCAT
ATCCCACATGTTGTTGTGATCATGTCTAATACATGTAGTAGCAGAAGTTC
GGTTGATGTGTGTTACAGAGTTGACCCTGTGTATGTGCTGCTTTTGTGTA
GGTTATGGCCTGCAGTGTCACAGGATTCTGCAGACGTGTGGCCGGCTCAT
CGGACTGGAAGACGTGTATGCTCGGGTCCTGGGCGCCAAAAACCCCCTCA
GTATCGTCCACTGTTTTTTCAAGGGACTGACCAAAGAACAGGTAATTAAT
AACATTGTCCTACATTTACATGTAGGCATGTTGTATTTTTGCCAGTATGT
TTGATGTGAACGTATGATTTTGTCTAATGATTACGGTATAGTCCATTCTG
CTGGATATTGAATACAAAAGGATATGTAGCTTTTAATTTTCATGGCCAGT
CATTGGTTGTCTGCAGAGAAATGCTAAGTATTAGCATTTGTATAGGACAA
TGGTTTGTTATGATTTTGGTACATGTAGCTACAAAAGGTATTTGTAATAA
CCATTAAAGGAGCAGTAAACTCCAGAAGGAGGTACTTTTTACTTCCAATG
GATTATAATTTTAGGAAGTAAAACGTATCCACTAGTCCCATGCATATCAA
AAAGCATGCAGTATTCTACTAAACTCCCAAAGTATCCTCTAAGCAATCTC
AGCCTATGGGTGAATTCAATGTGCCTAACAAAAGTTTGGTTACAGACAAG
ATTTCAGGGGAGATGAGAAAAACTTGTTGTTGTATGTTCATGTGTCATTC
ATGTTGACCCTCTGTGTCCTCAGGAAACCCACCAGCAGCTGGCTGACAGG
AAAGGCCTCCACGTGGTGGAGTTCAGACAGGAGTGCGCCATGCGGCCCAT
CGTGGTGGCCTCGCCCAGCGACGGGAAGGTCCGCGAGGAACCCGAGCTAG
AGGACGACATCCCCGACATCAAACTGGACATCAAGGATGTGAAGAAGAAG
GAAGGAACTTACACGAGTCCCTGGGAAGGCATCTATAGGAAAGAGTATAG
ATTCTAAGATGCCAAATGTAATCGTAGTTAAAGCTTCTACACTTTACCAC
TGAGTAGTTGCAGCTACTAGTGGTAGATATATACATTCATCTTTCAAGGA
TGGTTGCATGTTTTTGTCAATTTCTTTGCTGTCATTGTGGTGTATAGCAA
TCTGTACTTCTGCCATCCATGTGTCAAATGCTGAACCACATATTGAAAAG
ACAGATATTTCCATGTACAACTTGATATATCCAATTCTGTCATGATTTGA
CTTGTGTGCAAAGCAGTCCACTACTTCTGTATCCATTTAGCAGTGGACTT
TTATTCAAGCTCAAGCGTTTGTAGTATCTTTTAGGTTGAAGCAATAGTAG
TAACACAGTCAATAATAGAATATATGTTTGCATTGTGATGAGTACATGGC
AAAAACTACCACCTTAAGAACTGTATGACTATGTGAACACAATAGGCAAG
AATGAAGAACATAGCTCAATTTCTTGTTTTATTGCTAAATCAACGTCTAA
TTCACTACAGTCATTGTAGCACCTATTGCTAGACTTCAGTGACAGTAACA
TACAATTTACAAATCCCTCTTCTCATGTGATGCAAGGTACAAGGTACACT
CTGCAGTTATAATATATGCTGAATCTTCTTCCAATTCACTGGTCTCAAGT
TATTACCTCTCTTTAAGTATTCTTAGAATTCATCTTAACAGAAGGTATTT
CATAAATTGCAAAGTTGCTTTGCAACATGTTAAGCACCAAGATGCTTTTT
TTAATGTCAACTAGACATTACTACAAGCTCTGTTACTACATTCTCTGATA
GCCAATCCAGCACTTGTACAGACATGCTCACAAAACAAGCGATTAACAAC
ATTATTCAATTTGCAACCATAACCAGAAGGATCCATCTATTAAGCTGACA
TTATAATTATTTGTGGTTTCGTAACATTTGCTAGCTGGGTTTATCTCATA
CCACATCTTTCAAGTATTCATTGACAATAAAGTCATGGGTATGAAATAGA
CCATGTACATGAAGTTCTTATTTTTGAAAAGCAAAGTCTACCATTCTACT
CGTTATACTTTGCTACTCGTACAATACTGCAAACGTAAGAATGTGTGTTG
GATATCCCTGCCAGAGAGGAAAAGAAACGTTGACCATTCCCTGTTATACT
GTAAGGGGAAAAATCAACATGCCCACAATATACCCTATTAACACACAAAG
TTCATTCACCATTATTAAAATCTCATGCATCGTTTATGGCTATCGAGTAA
TTTTATTATGCCAAGAAATATTTGGCATATCCTGTCTTCACTGACCTAAA
TAGCATATGCCTGCTATGAGTGTAAGAATTTACTTTTATCACTTGATTAA
TCTTTGTTGCTGAGAAGACATTGTTGATATAACCACATTTCTGCTGTCTT
GCTATTTCCGGATTTTTCAGCTTGTTTCTTACTGTGACAGTGGTTTTAAT
TGAATCTTGTGTACTGTTGCAAAAGAAGGTTCTTATTTAGACGTAGGAGC
TTCGTC Coding sequence (CDS) from alignment at Sc0000086:375934..383639- >Blg00355.0 ID=Blg00355.0|Name=Blg00355.0|organism=Branchiostoma lanceolatum|type=CDS|length=1173bp|location=Sequence derived from alignment at Sc0000086:375934..383639- (Branchiostoma lanceolatum)
ATGTATTCATGTATACCATGTTGTATTTCAGATGTATCTATAGTGAGGAG
TGTGTCAGTCATCCCCTCTGTATCAGGGAAGGTACTGATGACATCACAGA
TGAACCAACCAACCAGCATCCAGCCCTGCAGACATGTCAGCTTCATCAAT
AAGTTAACTGCTGACCAGCTGTGGAAAGGTGTTTTAGCTGAAGGTTCGGG
AGCTCTGAGACGAGCTAGAGGCAAGAGAACCAAGAAGAGGACCAAGAGAG
ACCTCAACATTGGCCAGATCATCGGTGAAGGAAAAGACGCGTACGTGTGG
CCAGGTCTGAACGCTCCGGTGATGACGGCCGGAATGGTCCACGGGATCCA
GAAGAAGGACAACGACCCCGAGAGAGAGAAGAAGCTGATCGAGGAGAGAG
ATGCGTGGTACAAGATGAAGTCCAAGCGGTTGAAGAGGCAGCGAGGATGG
ACCGGTGGAACATTAGGGGGCACCAGCCTGGGGTCACCTGATCCTATTGG
CAACAGAACTTTTGAAGACTTTGAAGCAAGGGTATTAGAGATGCGTAACG
TGTTCAACATGACAGCTAACATGGGCAGGAAGAGGTCTGTCCGAGCCCTG
GTGGTGGTGGGCAACAGGAAGGGAGCTGCAGGATTTGCCGTTGGAAAAGC
TCTAGATGCCAGAACAGCTCTGAAAAAGGCAAAGAACAAGGCAGTGAATG
TGCTGTACTACATTGAGAGGTACAATAACCATACAATCTACCATGACATT
GACGTGACCTTCCAGAACACCAGAATCAAAATGAGGAAGCAAAACAGAGG
TTATGGCCTGCAGTGTCACAGGATTCTGCAGACGTGTGGCCGGCTCATCG
GACTGGAAGACGTGTATGCTCGGGTCCTGGGCGCCAAAAACCCCCTCAGT
ATCGTCCACTGTTTTTTCAAGGGACTGACCAAAGAACAGGAAACCCACCA
GCAGCTGGCTGACAGGAAAGGCCTCCACGTGGTGGAGTTCAGACAGGAGT
GCGCCATGCGGCCCATCGTGGTGGCCTCGCCCAGCGACGGGAAGGTCCGC
GAGGAACCCGAGCTAGAGGACGACATCCCCGACATCAAACTGGACATCAA
GGATGTGAAGAAGAAGGAAGGAACTTACACGAGTCCCTGGGAAGGCATCT
ATAGGAAAGAGTATAGATTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00355.0-exon-Sc0000086-1570713199:383585..383639 | Blg00355.0-exon-Sc0000086-1570713199:383585..383639 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:382690..382858 | Blg00355.0-exon-Sc0000086-1570713199:382690..382858 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:382095..382220 | Blg00355.0-exon-Sc0000086-1570713199:382095..382220 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:380181..380405 | Blg00355.0-exon-Sc0000086-1570713199:380181..380405 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:380031..380065 | Blg00355.0-exon-Sc0000086-1570713199:380031..380065 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:379481..379571 | Blg00355.0-exon-Sc0000086-1570713199:379481..379571 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:379213..379259 | Blg00355.0-exon-Sc0000086-1570713199:379213..379259 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:378935..378992 | Blg00355.0-exon-Sc0000086-1570713199:378935..378992 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:378617..378679 | Blg00355.0-exon-Sc0000086-1570713199:378617..378679 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:378199..378338 | Blg00355.0-exon-Sc0000086-1570713199:378199..378338 | Branchiostoma lanceolatum | exon |
| Blg00355.0-exon-Sc0000086-1570713199:375934..377666 | Blg00355.0-exon-Sc0000086-1570713199:375934..377666 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:375934..383639 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00355 |
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