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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:573680..579160+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00354.8 ID=Blg00354.8|Name=Blg00354.8|organism=Branchiostoma lanceolatum|type=mRNA|length=5481bp|location=Sequence derived from alignment at Sc0000086:573680..579160+ (Branchiostoma lanceolatum)
ATATCACGTGAATATATGTGTTTTCAAATGTGCCACATGCAGCGAAAGAT
GCATCTGCATAGTATTGAAGAAAAGGGCGATCGTGTGTGTAATACGGTTT
ATGATAGGCTTCAGGTGCCTTTAATTCTGTATGCGTAGATTGGCAATAGC
TGCACACACGTGAAATCTTGTTGTTCCGTTGGGTAGAGCCGGAGAGTGGG
CGATGCCACCATTGGGGGTTTGGCAGTTTTTGTAAGCCGTTATTGGCCGT
TATAATCTTATGTGCATTATAAAGCGTAATTTTTAGACGGCTGGATTCAT
CGTACCTAATAACGCTCTAATCCGAAATAGGGACAAATCGAATTTTTAAC
ATAATGCGCTATGAGCGCCGAGAATTTTGCATATTTCGAACTGCACTACC
GACTACCCCCATGCAGACCCCCTACAATTGACTCTACCCGAGAGGTCGAC
TGTCAAGCCGGAGGAGAGCCGAGCCGGATGTTTAAGGATCTCTAACCCGG
TAGTGCAGATAACTGAGACGGGGGCTCAGAAAGGACTACATCGTTCAACA
GTTCTCAACAGCGGTAGGTGGGAGTTTTATAGTTCGTGACTTTCGTAGTA
GATCATAGGTAGGTTGTAGCAAGGAGATTAATATCAACCAACCTCCTTGG
TTGCTGAAAATTTGGAATTACCAGCACTAACGTTATAGTGTCCATCCATG
TAAACAATAAAAGATGTTAAACGTCGCCCTAACATAAACACGGGAGGCTG
ACGTTTCTGTAAAATCGGATCACTTCGCTATGCATGAAAACTAAAAGCAC
CACTTGGTTTGTTGTCTGTTTGTCCATTTGCATGCATGTCGGGTACAATC
GCCTGTATGCATGACTGGTACAGGCATTAGTAGTCTACACCAGACTACTA
GCTGTAGAGTTGCTGAAAAATACACTGAGTAGCAAGTGGCCAAGAAGGGT
GAGTAATTTTTCGGACTGAAGAGTTGCTAAGGTGGACCTCTGTGTCCTGC
TAACTCTTCTGACAAATAAGTCACCATATTTTGCCAATGTCTCCTATTTT
GTTGTAAAGCTAAGGAGTCTCGAGGAGACTATGTATTGATTTGTGCTAAC
TGAGCTGGACTGTTTCTATCGTGTAACACTGTAGCACTGAACAAGGCACG
ATCCTCTGGTTGCGCTCAAGAATCATTTTCGCTGAGTATAGTCGACAGGT
TATGCGTTGGCATGGCTTGCAACGGTAGAAAAGTTAATGTACGCCACGGC
TCTTTCAAAGACTATCATGACAGTCAATATAGTAACCTATACACACACAA
TAAGCTAGTGACACCGTTTTCTTTTTTCAACGAGTTTTAAGCGTAACTTA
AATATAAGTCTACAGAGTACAAATGTACAATACATATACGTGCACTGCAT
TACACTGCAGACTGGTCACGGTAGCCTACGTAGCAGACTCCTCGGTGGGC
ATTTCAACATGGCCGTCTGCCGCTGATGGTGCACTGTTTTCTTATTGCTA
GCTAGTTCCTTATGCTCCTGTTTTCCGCTTTTCCGCTTGGAATAATTAGA
AGGCAGTCAGATTACAATCAGATAAACAAAACAAAAACTGCAATGCTTTT
TGAGAGGAAGCTTGACCAAAGTAAGTAAAATGCCAGTCCAGGAGCCTGCT
ATGGAGGCTACACCACGTCAGGTGTTTCTGATCGCGTGATTATGGTATCC
CGGGCCCGCCTATTGAAAAGACTTATGTCTTGTTGACTTTATCGACTATG
TACATTGGTCGACACGCTATGCAAATACGGATGTATGCAGACCGTAGTAA
GAATGCAAAAGAGGACTTTAGAAAACCACGCTATTAAAACGTCAAAAACG
GCTGGTTGAATTCTAGAATTGATTACAAGAGGGATAAAAGATGTCACTTG
CAGGTGACGTCTCTAGGGTCAGAAGTTTAAAGCTGTACGTGGTGAAATAC
GATACGTTTCTTTTATTGGGTCCCGGGCAAAACATTTACACAGGGAAGGT
CGTTTGTCGTTGTACATCGCATGAAAGCAGGTTCATGTCGGAATTCGAAG
GTAGGTATGGTTTAACTTTCCGGGTTACCAAAATATTGAAGGGGTGTCTG
CAAAACTGTAGAATTACGTATGGTTGTCACTTCACACGTATTTACGTGCT
GTGCGTGTAAAGGGTAGGTGCGTGTGTGGGGAGGGGGGCGCGGACGATCA
CGTTCATAGCCGGACCTTGGACCGCACACCTGCGTGATCTTCACGTGAAG
GCGAGTTCCCGTTAGAGGGTCGGTCGATATTGCCACACCGACAGACGTCT
GTTCAGTCTGACAGTTTAGTGGGACTAACGTTATATTCTAAGTGCTGGTA
CTGAATATTCCCTTCAGTTAAACGGTTCGCTGGTTACGTTTTGTTTGTAA
CGGACGGTAACGGAAAAGGTAGGTGATTTGCAAGTTGTCGTTTTTCCCAA
CACCTTTAGCGATTGGTGATTTACTAGAAGGTAATCTTATGTGTGTTAAG
CATATCACTTGAAACGAGAGGTGACCAAAAATTGTTACCTAGTACCAAGG
AGGTTATAGTATGACTATAATCACTATACCCTCCTTGCTAGTACATATGT
CAGGTGTGTTACTTAGTATTGTAGATTGCATGTATAGCTTTATCTTACCA
CAGTGGTCTGGCCTATCATTGGAATGTCGTACTTAAAGCGACAAATATAC
CCTTTAGATACAGCTGTTCAATTCGTTATTTCTGTTTAAAAGTGTTTTTT
TTTTCAAGTCACACCATGCGTTAAGTAAAAAAATACTAGATGGGTGATGA
TTTGAACCGTCAAAAAACTAGGTTTCTATCCGTCAAGCGACGCCGCAAAT
GAACTACAACTACCTGTAACGTTACATGTACTAAATCGACTCAAGCATAC
CATGCGTCACAATGTCACTAGTACTGGTACAACGGCTGAGTGCTGAAAGA
TTAGTCTCTGTATGAAGGCAGAACCCTCGTTGTTGATGGCCCTCCCTTGA
TCTCCAAGCAGATGTTGGGAGGGAAGATCGTAGTAACGTTTTCTGACCGC
CTACTGTAAAATAAAACGGAGCAGCTATCAAACGTTACAAGTCGTCTCTC
TCAACATCTGCTTGGAGATATAACCCTCAAAGGCCGTTCAGTGAGAGGGT
CATGGTTAATGATTATAGTAGTTAGGCCCTTTGTAGCCGCTAGTACTAGT
AGCCGCTAGCTGCAATCTTTTCGATTGCTATCGGGTCATCGGTTACTTCG
GGAGATGGTACTAAGGTAAGGCCATTTCAGGACTCTACGTGAAACTTGTG
AGTACCGCCAGTGGCGTGAAGTCGGAAGCGGCTGAAAAATGACACCGTCT
GGTAACAGGTTGTCGTCTGGTAACAGGTGACAAACACAGAGGGGTTATCT
TTCTTTCAACAAATGATGATCCGTGCAATACTAGTATTTGCAGATTATTT
CGCACGATTTAACACAGAGGTTAATCGATAATTGTTGTTTATATTTCATC
TGTAGGTTTTCTCCAGGAACCATAATCATGTATTTCTGGCAACAGTGGAA
GATTCTGTCCCAGTTGCAGAGGCTGCCACGTCAGCGGCTGGTGCAGCTGA
CGGAAGTGCTGCAGGGCAAGGCGATGGGCGTGACGGAGCCAGCAGCCGCC
ACCGCCGCCGCGCAACATCTGCGACGCCGCCCCGACGCCAGCATGCAGGC
CCAGACGGAGGGACTAGGCCAAGAGGACACCATGCTAGGGCTGAAACAGG
CCCAACCGACGGTATCCAGTCATCACCGGCGGGACTTCGACTCCAGCATG
CAGGTACACGCCGACGGACTGGGCCATCACGACACGATGTTCGCGGCTCA
CGCCAGGGCCATGTCCACCGTGTCTGAGCAGCAAGTACCGAGCGTGAGGA
AAACCAACGGCAACGGGAACGAGAGGAAGGGTCGCGCCCAGGTGATCGAG
CAGCTACTGTCTCCAGATGCCCCGCAGGACGTCTTGAAGCGGGCCACCGA
CAGACTCAACCAGCAGGAGAAGATGCACCTGAGACAACTTGTCATGAAGG
CGATGGCTTGATGGAATGATGCGTGTAACGTGGAGTCGTTGAAAACTGAG
AACAGAGANGATGCGATATGCGTGTAACGTGAAGTCGTTGAAAAAGAACA
GAGAGACTTTAGAAGTAACATTTGTAGAGACTAATCTTAAAGCATTTTCA
TTCAACGATTACGTGTATCTTGAAGAGTGCCTCTTGTACAATTATTGTAT
TCATTACTTCTGGAACTATCACAAACTTATCGTGTGTGAAAAAGCAATAG
CAGTTTTATGTTAGGTGAAAATGTTTCTATCAGCTCATCAAAGAGTTACG
TCACTGCTACAGGTGTGCACATCAAAGAGCCGCACAGGGCAACATGTGTC
CTGTGCGTCCTGTGCACATCAGCCAGCCTGACGCCAGGTGGCGCTACTGC
GCGCGACAGAATCCACACCTGCGGCATCTTGTCACACATGTTGCCCTGTG
CGGCTCTTTGATGTGCACACCTGTAGCGGTGACGTAAGTCTTTGAAGAGC
TGATAGAAACATTTTCACCTAACATAAAACTGCTATTGTTCAGCTTTTGG
TATGTTCCCTATAAGTAGTCAAAACCTATTGCCTGAAAAAGTTACCAAGC
AGCAAGGTCTACAACAAAATAAACGTGTAATATATAACATTTTTCTCCTT
CTTACCAGTTAATTGTAAATAGTGTGGCAGTGTTGTTGCTCACAAAAAGT
TCCATCTGAAAGACTTTCATAATTTGGTCTTACCCTGGTTGAATTGGAAC
CAACATTGTAAGCATATATGTTGATTTTACATATACTTTTTTGTCAGCAA
AAATTGTGTGGAACTCCTTGCAACTTTAGAGCTATTTTTGTTGATATAGG
TTTACCCTGAATTGTTAAGTGAATACAAGTATTTTCCATTGTTTCAATAT
ACATGTATATGTCATCCCTGAAATTTACTTCTCTTATTCTCAGTGCTATG
AATTGTGACTTTCAGAGTCTTACAGGCGGTCATAGATCTTTGTGGTTAGA
GTTACAAAGATGTAGTATGAACTGCAGAAAACATGTCAAAAGTAGGTAAT
TCTTGTCATAGAAGAAGCTTTTTTAAAAAATGTATTAATGATTTCTCTCT
GTCTGTATGAATGTACATAATAAATACAAGCATATGTTTTGTAAGTGTAA
TTGTATTACTTGTGGAGAGAGAAAAGGCAACAGACTTTGGTTATTCTGCT
AGAATATTAGAGCACGTTTTTTTTACCAAATAGCCCAGTGGGAAAAGTGC
ATGCTATACATTTGGGAGGTTGCAGGCTCAACCCCTAGCTGTGTCATTCA
TACCAAAGATGTTTATAGTGATACATACTGCTTTAACTGCTTAGCACTCA
GCAAGAGTAGGGGAGTTAAACACACACACCCCTACCAGTGGACTAGTCTC
CTACTGTAGTGCTTGCATAACTGTGTGACCC Coding sequence (CDS) from alignment at Sc0000086:573680..579160+ >Blg00354.8 ID=Blg00354.8|Name=Blg00354.8|organism=Branchiostoma lanceolatum|type=CDS|length=534bp|location=Sequence derived from alignment at Sc0000086:573680..579160+ (Branchiostoma lanceolatum)
ATGTATTTCTGGCAACAGTGGAAGATTCTGTCCCAGTTGCAGAGGCTGCC
ACGTCAGCGGCTGGTGCAGCTGACGGAAGTGCTGCAGGGCAAGGCGATGG
GCGTGACGGAGCCAGCAGCCGCCACCGCCGCCGCGCAACATCTGCGACGC
CGCCCCGACGCCAGCATGCAGGCCCAGACGGAGGGACTAGGCCAAGAGGA
CACCATGCTAGGGCTGAAACAGGCCCAACCGACGGTATCCAGTCATCACC
GGCGGGACTTCGACTCCAGCATGCAGGTACACGCCGACGGACTGGGCCAT
CACGACACGATGTTCGCGGCTCACGCCAGGGCCATGTCCACCGTGTCTGA
GCAGCAAGTACCGAGCGTGAGGAAAACCAACGGCAACGGGAACGAGAGGA
AGGGTCGCGCCCAGGTGATCGAGCAGCTACTGTCTCCAGATGCCCCGCAG
GACGTCTTGAAGCGGGCCACCGACAGACTCAACCAGCAGGAGAAGATGCA
CCTGAGACAACTTGTCATGAAGGCGATGGCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00354.8-exon-Sc0000086-1570713199:573680..574242 | Blg00354.8-exon-Sc0000086-1570713199:573680..574242 | Branchiostoma lanceolatum | exon |
| Blg00354.8-exon-Sc0000086-1570713199:577185..579160 | Blg00354.8-exon-Sc0000086-1570713199:577185..579160 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:573680..579160 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00354 |
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