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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000086:182119..186540+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00339.0 ID=Blg00339.0|Name=Blg00339.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4422bp|location=Sequence derived from alignment at Sc0000086:182119..186540+ (Branchiostoma lanceolatum)
ATGAACCGGTAAATGAACTTTACTCATAGAGTCGTAGCAAGAATGATCGT
ATCATTCTAATTCACGATAGGTCAAAGTTCAGGAGGTTGACTGGCAGCTG
GACTAACCTGTTTTGGGTATCTATTGACATGCTACAGCCGCTGCTACTGT
TATTTCTGGATAGCTTCTTCTCCATGACCCCAAATCCAAGGAGCGAGTTC
CTCGTGCTTCTGTGGCTTGTACAGGTGTACGTCACACATGGATGACCAGC
ACTACCTGACAGACCTTTTAACATAGTGTGGAACGTCCCCTCTAGAAAGT
GTGCTGAGAAGTTCGGGTAAGCTGGCAGATAATGCATCACTATATAATAG
CTGTTATCCTCCTATCCAGAAATAGACAATATATGCATGTTTTTTAATGT
GAATTCTATCATCTGACGGAAGCATATTGTTATCGAACACACTTGTGAAA
ATGCAACGTTAGGCATACAAAACAAAGATATTACAGTAGAACTTCATTAA
AGGCACCCAGAGCATTTTATAAGACTTGAAAATTAGAAATATTCTAATTG
CTGTAATCTTTCTGAAATTGACGATTATGCCACTGTTTACCACATTTGCG
TTCGGATTTCTTTTCAAAAGTGCGCAAAAACGGCACAAAAATAATCTACA
TGGTGATATTTTAGTTTTGCGCCCACTGTAAATAATGTAGATACCATAGC
CCCGCCCACGTCCGTCAAAACGTAGAAATGCAATTTTAAAACATAAAAAA
GCAAATATTTGACGGACATGTAGTCACTCTCTCATTGGTCGAACCGCTAA
TTGTGATGGACAGTCAGGATCAGTCTATTAGGGCTTGGATTTTCTATCAG
TACTCACCACACAATGACAGCGTGACCTTCTACTGACGTCACGCTTCCGG
AAAGTCACGTGTGACACATCGCACATGCAGCAGATCTAATTATCTACGAT
AGAATCCGTATCATATGAGTTACTGTCTTTGTGCTGGATTAAACGTTTAA
CTGAGACGACGATATTGTTCGTTCCTTAGTGTTGAGTTCAGTTTGAACGA
GTACGATATCGTGTCCAACCCCGGGCAGGAGTGGAATGGAACATACGTCA
CCCTTTTCTACCCGCAAAAGAACCTCGGGCTGTTTCCACAAATACACGAG
CAGACGGGACAGGACATCAATGGCGGGCTACCTCAGGTATTTGATTAAAG
TAAAGAGAAAAGAAAGGCACCTCGTTCCTCTTGTATTTTCATCGTACCCA
TTGTCCCTTTTTTACTTCATACCCCACGTCTTAATATGGATATGTATCGG
TATAATAAGGGATAGTGGTTAACGTTACATTCTACGTGTGTAAAGTCAGA
TAGGGTTTGAGGAATCTTTGAGTAGATAATGCTGTGACTTCCATTACGAA
TTCTGACCGGGGAAAACTTTTTCTCTGTACGTGGCACTTTTAAAGTCAGT
TATGAAAAACTTGAGTGCAGTGCCACGTCGCCCTTGTCTGTCCAAAAAAA
GTGAAATAAGAAAATAAAAGATAACAGAAGAAACATCGAATCCAGGCGGA
AATTATGTACAAAACCGTTTTAACTATGTTGAGCTGTATACCACAGAAAG
CCGACATTGAAGCCCACATTGCCAAGGCTACAGACGACATCTACCGAATG
ATTCCCGACGCCAACTATCAAGGTTTAGGAGTGATCGACTTTAAACCATG
GCGGCCGCTGTGGAACCGAAACTGGGAGTCAAAAGTAAGTAAGTTTTAAT
TCGGCGAGCATATTCAAGACTATAATCGTTAATTACCACTATAGTTATGC
TCAGAGAAATATTATATTCATATGAATCTGAACGTACAGCCAGTTACCCA
TCTGAGTATTGAGGCTGTTAATGCTTCTATGTTGCAAGTTATCCCTAAAC
GTGTACGTGTAGTTAACGACGACCACAGCACCACAAATGCAAGACATCAA
CATCGTATGCTTATGTGTTTGCCGCTTCTAAGCACTCTAAAACCATTTCC
CTCGCCATGCGTTTTACTATCCTGACATTGAAATCACCGTGAAACAAATC
TATAGACATGTGATGTGTAGAATTCATATGTACTGCCGTAACATATAGTT
GAAGAAAATAAATTCATATTTCATTGTTGACAAAGAGTATCTACCGAACA
AAGTCAGAAGATCTCGTCAAACAATCGACACCGGGTGCTTCGAAAGCGGA
AGTGACGTCAAAGGCGAAAGAGGCGTTTGAAGGAGCAGCGAGGATGTGGA
TGGGGAGAACTTTGAGTCTGGTTAAGATGTTACGTCCGGGAGGCTTCTGG
GGTTTTTATTTGTTCCCGGATTGTTATAATTCCCCAAGGGAAATTCAACT
CCGACAAGGCACAAGCTACGACTGCACGAAGGTAAGACATTGACGTATGA
CATTGAAATAACTATGAGACTGAGGTATGCGTTTGGCACACAATGATATT
AGTGGTAGACCTGGAAGGATCGGCCAAGTTTAAGGTCGCCAAGGATAACG
GCTCGAGCCCCATTTTTGAACTTGCCAATGGATCTATTTGTTGAAATTTA
AAGCAAGAATGTTGCCATAACTGTGCACAATGTCGCTGTGAAAGTGCTCT
TTGTTTTCTTCAGGAGGTGAAATCTGACAATGACCAACTACAATGGCTGT
GGGAGGGCAGCACGGGTTTGTACCCGAACATATACCTGACAGGCATCTTC
AAAACTCAGCCCAGTTCGGAACAGTATGTTCGTGCCCGAGTGTCCGAGAC
CTTCCGAGTCATGGACAGTCGGCAAAGTTCGGCTATCCCCGTCTACCCTT
ACGTGCGCCTTCGGTATCGGGATTCAATGGAATGCCTTACGAAGGTTATC
AATGTTTCATGATTAGTTACAGAAACTACCCACCATTTACAGATGAATCG
AACTTTAGCTTAGTGCTGTACTTGTTTCATGATTATCAAAACACTAACAT
TGTTATGTTTCTTTGCAAAAAAAAGTGGTGATTTGTTTACAACAGGCATA
AAGTTGTGTTTTAATGGAACATTACAAACAGAAGGGAAAACTTCTATGAA
ACATCCACACGCACTCAAAACACAAAAACGGATGAAATAAAACATGCAAT
ATGCATCAGAACAACGCTATCCTAAATACAAACTGAAATGAATCTTTTTA
ATATTAACTGACCCTAGATATAATTTTTTTCTGTCGTTCAAAACTTCATC
TCTCCTATGTTGTTCTTCAGGCTGACCTGGTCTCCTCCATACAGGAGGCA
GCGGGACAAGGCTCGGCCGGCGTGGTCATCTGGGGCGCCTCGGCTGACGT
CAACTCCAAGGTGGGAGCACTGATTCTGTTTGCTTCTTTAAGACATTAGA
CCCAATCTAGATCTGCTTGGCAGTAAGCTCGGTGTAGCATGCTGTATAGA
TGAATATATAATTCTCCCTGTGCCAGAATCGCACGAACGGATACATGATG
ATATCCGAACTTTGCCGACCGTCCATCACTCGGAAAGTCTCGGTCAGTCG
GATCGGGGACATTTTAACTTAAAATGGTGTGTTTATGTTCCACTAAAAAG
AAAAAGTACCATTTATATTTTATTCTAAATTGGTGGAATTCTCCAATAAT
CTTCTTTATTGAAGCGACCGTGCCAAGTACATGTACTGAATAATCTTGGC
GACTGATAGATGTTGAGGACATCCAATTCAATGATATTTCCTGTTTTTCA
GGAGAACTGTTTATCACTCAGGGATTATGTGACGACAACGTTTGGGCCAT
TTGCAAAGGAGATGATGAACCAGGCGGAGGATTGTGGCAGGAGGGAGTGC
AGCAATCACGGCAGGTAAGAGAAGACCGTACAACACGTCTGCAGGATGAT
TAGTAACATCTTGTGCTTTCAGTTGAATATAACCGAAGAACCACATTTTG
ACAAGGAATTCTACATCTATATCATAATATCATCTCTGAGAAAATAATGA
TGTCCATATGTATGACGTGGACATACTTTCCAATGGCTGATATTGGGATT
TTTTTGCTTTCCGCAGTAACAGATACGGCAATTCAACGCCGGGACGACGT
CAAATAGTCTTTGTATTAAATATAGGTCGTATGTTTTAGTCTTCATATTG
ATCCAGTTACTTTTTCGGGCATATTTACTACGTAGACACATTCATTTACT
TCACATTCTGCTTCGTATACTATCTATTCTAATACGTTAGTTGTATATGT
CTTCACAGGTGCGTAACTTCTTACAAAAGGACGCCAGTAGACGCAGCAGT
GAAGACAGACAGAGTCGACAAAGTTTACGAGGGAGTACAGAGTGTGGTGC
AGAAGACACCAGAACCACCAGGAGGCGCTGCAAGCAAAGAACATCAGTCA
CACGAACAGGTCGGCTGTGTGCAGTTTTTTTTGGCTACACGTCCGGAACA
AAGCTACAAGACTCAGGAATAA Coding sequence (CDS) from alignment at Sc0000086:182119..186540+ >Blg00339.0 ID=Blg00339.0|Name=Blg00339.0|organism=Branchiostoma lanceolatum|type=CDS|length=1197bp|location=Sequence derived from alignment at Sc0000086:182119..186540+ (Branchiostoma lanceolatum)
ATGAACCGTGTTGAGTTCAGTTTGAACGAGTACGATATCGTGTCCAACCC
CGGGCAGGAGTGGAATGGAACATACGTCACCCTTTTCTACCCGCAAAAGA
ACCTCGGGCTGTTTCCACAAATACACGAGCAGACGGGACAGGACATCAAT
GGCGGGCTACCTCAGAAAGCCGACATTGAAGCCCACATTGCCAAGGCTAC
AGACGACATCTACCGAATGATTCCCGACGCCAACTATCAAGGTTTAGGAG
TGATCGACTTTAAACCATGGCGGCCGCTGTGGAACCGAAACTGGGAGTCA
AAAAGTATCTACCGAACAAAGTCAGAAGATCTCGTCAAACAATCGACACC
GGGTGCTTCGAAAGCGGAAGTGACGTCAAAGGCGAAAGAGGCGTTTGAAG
GAGCAGCGAGGATGTGGATGGGGAGAACTTTGAGTCTGGTTAAGATGTTA
CGTCCGGGAGGCTTCTGGGGTTTTTATTTGTTCCCGGATTGTTATAATTC
CCCAAGGGAAATTCAACTCCGACAAGGCACAAGCTACGACTGCACGAAGG
AGGTGAAATCTGACAATGACCAACTACAATGGCTGTGGGAGGGCAGCACG
GGTTTGTACCCGAACATATACCTGACAGGCATCTTCAAAACTCAGCCCAG
TTCGGAACAGTATGTTCGTGCCCGAGTGTCCGAGACCTTCCGAGTCATGG
ACAGTCGGCAAAGTTCGGCTATCCCCGTCTACCCTTACGTGCGCCTTCGG
TATCGGGATTCAATGGAATGCCTTACGAAGGCTGACCTGGTCTCCTCCAT
ACAGGAGGCAGCGGGACAAGGCTCGGCCGGCGTGGTCATCTGGGGCGCCT
CGGCTGACGTCAACTCCAAGGAGAACTGTTTATCACTCAGGGATTATGTG
ACGACAACGTTTGGGCCATTTGCAAAGGAGATGATGAACCAGGCGGAGGA
TTGTGGCAGGAGGGAGTGCAGCAATCACGGCAGGTGCGTAACTTCTTACA
AAAGGACGCCAGTAGACGCAGCAGTGAAGACAGACAGAGTCGACAAAGTT
TACGAGGGAGTACAGAGTGTGGTGCAGAAGACACCAGAACCACCAGGAGG
CGCTGCAAGCAAAGAACATCAGTCACACGAACAGGTCGGCTGTGTGCAGT
TTTTTTTGGCTACACGTCCGGAACAAAGCTACAAGACTCAGGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00339.0-exon-Sc0000086-1570713199:182119..182126 | Blg00339.0-exon-Sc0000086-1570713199:182119..182126 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:183148..183304 | Blg00339.0-exon-Sc0000086-1570713199:183148..183304 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:183715..183852 | Blg00339.0-exon-Sc0000086-1570713199:183715..183852 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:184254..184499 | Blg00339.0-exon-Sc0000086-1570713199:184254..184499 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:184732..184962 | Blg00339.0-exon-Sc0000086-1570713199:184732..184962 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:185339..185428 | Blg00339.0-exon-Sc0000086-1570713199:185339..185428 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:185820..185932 | Blg00339.0-exon-Sc0000086-1570713199:185820..185932 | Branchiostoma lanceolatum | exon |
| Blg00339.0-exon-Sc0000086-1570713199:186327..186540 | Blg00339.0-exon-Sc0000086-1570713199:186327..186540 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:182119..186540 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00339 |
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