Blg00314.0 (mRNA) - B. lanceolatum

Overview
NameBlg00314.0
Unique NameBlg00314.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000086:227366..231267+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00314.0 ID=Blg00314.0|Name=Blg00314.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3902bp|location=Sequence derived from alignment at Sc0000086:227366..231267+ (Branchiostoma lanceolatum)
CTTGGAGACAAGTCATGTAGTATTAGCATGCAGTACGACTGCCCGTGCGC ATCACGTGACTGCTGGTCTAGACTGAATAGGGAAGTGAAATATGAGACAC CCCCATAAGTACTATTTATAAACTTCACAGTTCCAGTTCCCTTTCCTGGT CGCCAACACAACAGGTTGTCGCCCTGCTCACAGGAGTCTTCAATACGACG TTCCTTTTACAGACAGGTGAGTCATATGCTCTTATACTTTCGATCTTTTA GGACACACACCATGACAAATCATGGCGTGATACCTCAGATATCACAGAAG CAGAAACATACCAAGGCTGCTACCGCCAAGTTTAGGTGTACGGGCGAGTT TGAACTCATGAAAATGTCCTGCCAAAACGTACATGTTGCGATAGGTGACG CCATTTGAAATCACAGCTATAGGCATGTTACAACTTACAAGGATCTACCA TATACCGGCATGTTCATATCATGTAACGAAGGGAGAGGAGGTGATCGAAT ATCCGTGCATGTTTGTATGTCGTTAATTCGTGCATAGTCTTCCTTTGCGA GAGGTAAAAAGGTGGAGAACCCCCGATATAAGACACCTGTAGCATCTATC ATCATGTTTATATTGTAGTGTATGCAAGTAGGCATAGATCCTAAAACATT GCTTATATGACTGGGTTGAACTTATGATGTATTGAAGTTTGACTTCCCTT CTTCGAGTTTCGCAGATGGCACTTGTACAAAAAAACTTAGTACCACGAAA CGTCAATGTACATCAATGACTATCCCTCTTTCTCTGCGTTGCTGTGTAGA TTTTCAAATCCTGAAGGGTGTTATAGCAATAGTGCTTGAAACCCTTCAAG TTCCAGGCGGTATTTTACCAAAAGCGGAACTTCCGCGTTCTGCTCCAAAC AATGGCAGGCTGCAGTACTGTTTACCTCCGCCAGGCTTCTCTTCATGCGT GCTGGGCTTTATACCTTACACTTTTTGTCATATTGCAGTCTGTGTCCGTT AAATTCTGCACATATAGTTCACGAAAATAAGATTTTTACATAGCTGACAC GCTGCATACAATACACACATCATGCCTGACGAACTTTTCACACTGTTCCC GTTTTGCAATCCAAACCGTGAATGTGTGAAAGAAAACAAGGGACGACGGT ATTTGCCCACACAGACATTCACATAGACGTTGATGACATTGTATCAAAAT GAAGAGCAATATTAATGAGTAAATGATTGGAATAGACCTTCTTTTTTAAT CTGTTTGACTTGCATAATTTGGTTAATAATATTTCCCACTCATACTGTAC CCACGTGTTTGCTTTTTGGCCAGCAGACTATCGATAGCCTTGAAACAGCC ATGGCAGCAGCACATCTCCTGGCCGTAATCCTCCTGATCGCCACCGCCGC ACAAGCCGTCCTGGTGCCTGAAGCGTGGCTAGATGCTGATTCCTTCCTCT CAATCTTCGCCTTCAAAGGACCTGTGCGCTGGTCTAACTGTGGTAAGTTT CAGGTGTTTTATCAACCGAATGTGGCATCAATTTTTCCTTTGAACCTTCT ACCACCCTGTCTTGTCACTTCGTTGGATTTATCTATCTATCTATTTAGTT AGTTAGTTAGTTAGATGTGTTGCTGTTTTGTTATTGCTTTAGTGGAAGAC ATAACCTGTTGTGCACCCCCACCTCCCCACTTACAGGTGATCCCGTCACA CAGAGTTTTAACGGGACGATCACCCCAAACCCACCAATGAGAGGACAGAA AGTCGCAGGCTCTTTCACCTTTGTACCAGGTATGTGCTGACGGGTCGATA AGAATAGATGTGAATCAATCAATCAATCAATCAATCAATCAATCAATCAA TTTCTTATATATATATATATATATATATATATATATAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGATATAGATATATATATATATGTATATATATAT ATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAT TGATATGTATAATTATGTATATATATATATATAGAGAGAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGATGTATAGATAGATATACCGCATTATTGGT GATCCTCTTACAAGTGTTAAGTATGAGTGTATGTAACTCTACAATTGTTG TTTCGGTACTTATAACTACAGACGCAGATCTAACCGCTGGAAAGATCAGC CTGGATCTGTGGTATAACGGATCCCCTGCGCTAAAGGTACCTCTCCCGAT CTGCAAAGGCGGCAAGGGATCGGAATACTGCCCGATGAAAAAGGGAGGTG AGTAACGGTCACAGGGAATATGCTTGGTCTGGGGTGGGATACAATGGACG TTGTATATATACTGCTTTATACTTAGCATAAGTTGTCTTTTTGTTATAAT TTGGCCTATGTTATGTTACATGGGGGGAAGCACAATTATGTTTCCTTGCC ACTCTAGCCCCCTTTTTGTCCTCAGTTTGCGTCACGTTGCCTAAATGCAT GCTTTACTGCTTGATTATAGAAAAATTTAACAAACTTTGATACACTTTGA AGTTGACTACTCCCTTCTACTATTTAGTAACGTGTGATTGATTCATCTTA GCATATATTGTACGTCTGTTTGCCCTACAGTGAAGGTGACCGCTGCCAGT TCTACCGCAGTGCCCAAATACTTGCAGCCGGTAAGATGAAATTCTCCAGT GTGGTACAGACTTATAAATGAAAGGTTTCTGTATTGTAATTATTTATTCT TTATTTATTGAAACGCCCACTCCACTTTATAAGATTAAAACACCTATAAC GGCAGTATGATAAAGATCTAGTTCCCGGTTTCTACGGTAAAACACTTTCA GAAATTCCTCAAAATCGAAGTACTAGTACCACAATGATGCTCATGTTGGA ACACATTAAAATTTGGTTCCCAAAAACAGTTCCTAAAACTGCAGTGTGAC AGACACTGAAATGACTATGTACATTAATGTCCGTTACCGACAGATACCCT CTTCCCCTTTTTCGTTACTAAAAAGGAAGGAAATCCTTTCTGTTCCGTAA AGTCTTGCTGACTTTTGTTCTTTTTAGTGTTGTTCAATCTTTACTTTCAA TTCTCTATACTTTTTAATCTCGTCATCATCATATACATTGCTACGATGAC AATTTAGTCCATCACACATATCTAATGCGCATATTTTGTAATGCTGTAAC TGACTATGAAGTGCGCATATAGATTGGTACGATGACTATTTAGTCCACCA CACATATAGATAATGCGTGTGTGCTGTTATGAAGTGTGCATATAGATTGC TATGATGACAATCTAGTCTACCGCACGTACTACTGGCAATGAAGCTACGC TGTTAACTTTTGATGAGGTGTGATTTCTTGTTTTATTAGCCATAAAATTG TGCGCTATTTGGAAACCTGGCGTCTGATACGACTTTTTGTTTCTTCATTT TGGCGCATGCGCCCTTGCAGGGACACTACAACGGCACCGCCATCTTGCTG AATCAGGACAACCATCAGATGCTGTGCATTCAGGCGGAGGGGGACCTGGC CTAGATCTGAGGAGCGAAACCAAATGTTTCAGAAACATTGCCTATTCAAG AGCGCTAGAATCAACAATCCCCATTATCATCACATTCTTGACTTGAATTA AAAGTGTTCGAATAAAGATTTGACCAAAGATCAACAGGATTTGTGTTTTA TACGATCTGCTCACATGCACAATATCGACAACGTATGTTGTATTTTGGAA AACTATGCCATTTACAGCAAAGGATATCATGAATATCATGAAACACGTGT TATTTCTGTTGGATATGGTTTGTTAAAATTGAGTAGATATTCAAGCTTTC ATATAGGATTACTCTGAAAGAGTAGACGCTAAAAATAAAATGTCGCATGA AA

Coding sequence (CDS) from alignment at Sc0000086:227366..231267+

>Blg00314.0 ID=Blg00314.0|Name=Blg00314.0|organism=Branchiostoma lanceolatum|type=CDS|length=495bp|location=Sequence derived from alignment at Sc0000086:227366..231267+ (Branchiostoma lanceolatum)
ATGGCAGCAGCACATCTCCTGGCCGTAATCCTCCTGATCGCCACCGCCGC
ACAAGCCGTCCTGGTGCCTGAAGCGTGGCTAGATGCTGATTCCTTCCTCT
CAATCTTCGCCTTCAAAGGACCTGTGCGCTGGTCTAACTGTGGTGATCCC
GTCACACAGAGTTTTAACGGGACGATCACCCCAAACCCACCAATGAGAGG
ACAGAAAGTCGCAGGCTCTTTCACCTTTGTACCAGACGCAGATCTAACCG
CTGGAAAGATCAGCCTGGATCTGTGGTATAACGGATCCCCTGCGCTAAAG
GTACCTCTCCCGATCTGCAAAGGCGGCAAGGGATCGGAATACTGCCCGAT
GAAAAAGGGAGTGAAGGTGACCGCTGCCAGTTCTACCGCAGTGCCCAAAT
ACTTGCAGCCGGGACACTACAACGGCACCGCCATCTTGCTGAATCAGGAC
AACCATCAGATGCTGTGCATTCAGGCGGAGGGGGACCTGGCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00314.0Blg00314.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00314.0-exon-Sc0000086-1570713199:227366..227581Blg00314.0-exon-Sc0000086-1570713199:227366..227581Branchiostoma lanceolatumexon
Blg00314.0-exon-Sc0000086-1570713199:228689..228857Blg00314.0-exon-Sc0000086-1570713199:228689..228857Branchiostoma lanceolatumexon
Blg00314.0-exon-Sc0000086-1570713199:229052..229144Blg00314.0-exon-Sc0000086-1570713199:229052..229144Branchiostoma lanceolatumexon
Blg00314.0-exon-Sc0000086-1570713199:229537..229662Blg00314.0-exon-Sc0000086-1570713199:229537..229662Branchiostoma lanceolatumexon
Blg00314.0-exon-Sc0000086-1570713199:229996..230045Blg00314.0-exon-Sc0000086-1570713199:229996..230045Branchiostoma lanceolatumexon
Blg00314.0-exon-Sc0000086-1570713199:230836..231267Blg00314.0-exon-Sc0000086-1570713199:230836..231267Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000086genomeSc0000086:227366..231267 +
Properties
Property NameValue
GeneIDBlg00314