Blg00212.0 (mRNA) - B. lanceolatum

Overview
NameBlg00212.0
Unique NameBlg00212.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at xfSc0000818:11..4035-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00212.0 ID=Blg00212.0|Name=Blg00212.0|organism=Branchiostoma lanceolatum|type=mRNA|length=4025bp|location=Sequence derived from alignment at xfSc0000818:11..4035- (Branchiostoma lanceolatum)
GTGCACCGATTCTGGTGGCCACTGACGTTGCTTCTCGTGGTCTAGGTTTG TACTTAACCGTTGGCCTTCTCTATTCTCCCGTTCTGTTTCTTCCACATCT TCATCTGTCATGGAGCTCTTTCCTCAAATTGCACATCAGATGTGGTAAAA TCTGTCTTTGTGCGAATGTTGTGGGTATGACCAGGGTTTGTATACATCCT TCAAAATCTTACGGATTCGGAAATCATTAGGTTACACGCAACTACAAAGT CATGATCTAAAATAAATTTTAAAGAAATGCTTAATCTTTGGTCTTCTGTA TTGAGACCTGATGTATTTCTGTATTTCCAAGGTACCAGAAACAAAGCAAA AGGACATTGATACCTATTTCTCATGCAAGAAAGTAACATTTCTTCATTGT CCTGTAAGTTTATAAGTTATGGTTGCGTTTTGTTTCACGAGCCCTGGTGA AGAGTGTCTGTCAAACTCTTCCCACTAAATACACACACATGCACATAGCA TAACAGTTGGCACTAAGTGGTCTGAAGTTCTGTTGTTGGCATGGATGATT TGTATCCTCTTGAATAGAGAGAAATTCTGGGGACCGTTTACTGACGTTTT GGCTTTGTTTTTTGAGTTCCCTATCTCTGTAGATGCGCGGGAGGACAAAC CGGCATGACTACTTCATCCTGGGCCAGAGGAGAGGGCGACGAGCCTTAAC GTTTCCACAAAAGTCCAATAACAGTGCTACAGTACGGTTGCAATCAGAAA TGCTGCTATTAACATAGGGAGGGGATATATCACAAAGCTCCTGACTTGAA CTTGAAAATGGAATTCCTTCAAAAGAGTGCCCTCAAAAAAGGGTTAATTT TCAAAATCTGTGAAAAAGAAGGGAATTTATTAAGCGTCAACTTCTTCTGC CAAAATTGACATTGTGTTAATGGTCCCTTCAAATATTGCTTTGGTTTAAA AATGATAGAATGTTGAGGTTGAGGTTGGAGTGGAATAGAAAGTTGTTGTT CCAAAAGGGAGGTCGTGCGTTTGTCACCCAGATAGTGGTAGAGCCGGGGC AGCAGCATAAAGACTTTAAATCCGACCACGTTCGCGGCTCGCTCGGCGTA CCTCGTCCCTCTCTCACATTCGTGCTGGAGTCATGTCGGGACCTCCTGCC AAGATGGGAACAGCAAACCGGAGCCCTGCAGAAATCGATCAATCGATAAC AGTCGATATTGTCCCGGTAAGATCAGGGCGGTCGGTGTGAATCCGAACAC GTCCTCACTTTGGTGTTGTGAGTTGAGAGTGAAGGTGGCTCCCGTCGCAC TGTACTGGCTTCTCATGACTGTCGCCTGGCGGACCCTTGTCTTTTGGGGG TTTTCAAAGTGACACGAAGAGGCTCTAAAAAAAGCGATACGCTGCCTGAA GAGAGGAGCCCACCTCCACATGTCAAACCCTGGCCGTATGATTCCTCCGA ACAGACCAAAGTGCCTTTTGAGTCCTGTCCGGCATGGTGCATTTTCCCGG GTAGGCTGTCCACCAGGCTAGCCCAGTGGGGGCCCCTTTAGTTACCCAAC CAACCGGGAAGTGGTCCATCCTTACCCTGGGTGTCCATGGTGACAGCTGT AGTCTATCTGGGAGTGTGCATCCGCCGCGTACGTCTCCTGTTGGCCGTGG CTAACCCTTTGTCCTTTCCAGCACCTGTTGGACGAAAAGGCTGCAGGTAA GTGTTGGTCAGACGTACCTGAGGTAGAGTGGCCTTAATCAAATAGCTGGT ATTCTTAAGAGAGCAAAACAAACCTTAAGGTTGCAGGTAGGACCACACCG ATTCATTTCTATGGTTCTCTGACATTTTTTGATGTGAAAATATTGCAAGC GGACGTCATGAAAGCAGAGAGCAGGGAGAAAAACTTGAATATGACTGTAT TACTCCATAAAACTAAGTACACCAAGGCATAAACCTGGCCATGGTCTTCT GGCTTTTTTAGATGTTTTTTTTTTTAAATTCCGAGAACCAACCGATAGAA TTGGTCTGGCCTTATAGTTTCCAAAGCCTAGGTGAAAAGGTAAGGTAAAG CATGACGTATTGAGATAAAAAGAAGGCAGCTCTACCCAGGGTGCATAGTG TTCAGTCGGATGCAAACAGGCATTGACTGTCGGTTCCTTCTGTCCACACG TTGCCGTGTGTGCCCTCCAAACCACACCGTAACGCCTGCAGATATCACGG ACGTCAAGTTTGTCATAAACTTTGACTACCCGGGCTCGGCGGAGGACTAC GTTCACCGCATCGGGCGCACGGCTCGCAGCGAGCGCACGGGAACGGCGTA CACATTCTTCACCCCCAACAACATGAAGCAGGCCAAGGAGCTGGTGTCTG TGCTGCAGGAGGCCCGCCAGCAGATCAACCCCAAACTCATCCAGATGGTG GACGCTGCCAGGGGCAGCTTCGGAGGCCGGGGAGGTCAGTATAGCATGAG CTAAAAAGTAAAGACAATCATGATACATGATATAGTTTAGGCTCTACATC CACAGGAAAGTGATCCCATATTTTAATCCCTTCGAAAATGAATTAAGATA CCAGTGACTGTAAAGTTTGACTCCACCTGCTATGCCATAAGGCTGTGATG TGGGTTTTCGCACTCCCTGATCGTACTTTCTTACTCTCCCTTCCGTATTT CCCCTTGCAGATCGGAGACGGTGGCGGTATTAGAGAATCCTGGGAATTCT CAAAATACGCTTCCATCTTTCTAATTGCAGATCGGCGCCGGTACAGAACG GGCGGCGGTTCCCGTGACGACCGTGGCGGCGGTCGCGACTTCCGGGACCG AGGGGGGAATAGCCGCTCGGGGGGGTACGGGCAGGGTGGGGGGAGCAGTA CTGGTGGGGGGTTGAAGTCTGGGGGTTTCACCCAGGGAGGTGCCAGCGGG GGGATGAACCAGAACTCCGGGTCGAACCAGTCTCAACCATTCAGGGGGAT GCCCATAATGAATGGTGCCATGAGCAACGGAGGTGGGATCCCCTCCCTTC TGAGTCAAGTGGTACAGCCCGCACAGAACACGTCAGGTTATACTGGTTAT CAGTTTCAGTAGAAACCACCTGCAGCTGCATGGGGTAAAACTAGACCAGT AATCTCATGTTTTTTGTCAAGTTTATTTTCTACACACGTTGAGACGTCCC TCGGTTGAGATACTCTCGTCGTATTGTATATGTAAAATGTACATATGGGT GATGGGGTTTGGTATTTCAACACAATATGTGGAACAACTTTTCCCATATC AATTTTAGATAGAAAAGTTATGATCTCTTTTTGTTTCAACTATAGAGAAT GTTAAGGACTGAAAAGTTTCTTTTGCTTCATAGAATACAAATGTTAAAGA AAAGCATTACTGTTATGTACAAGGAGTTTTGCATTACTAGTATCTTTGTT GACATTTTGTATGTACGTACGACTCCAAATAATGGGACCATTCGATGACA AGATCGCACAAAGTAAGGGAGGCGTTAGCATCATGAGGGCATTTTTGTAT TTATGCCATACTTTAATCAAAGTGAGTTAGTGGTATAGAAAAAAGTTTTC GACTGAGTAGGATCTGTAATAAATATGCAGCACAGTTCGAATCTGGTGTA TTGTGTCCATTGGTTCCCCTAGCCTTATACGAGCAATCACAATGATGTCA CGGTGAAGCCCCGGTTACACATCGCCGAACATGGCTCCTGACCACCAGCC AACCAAGGTTGGTGGTAGGTCGGGAGCAGTCTGACCTGTTTTAGATAGTC AAAACACACCCTGACCACTACTGACTTACTCCAAACCACCAGCCAACCTA TTCCAGGCCGAATGTTTTGAAAATTTCGAACACCACCCTACCGCGCTGAA CACCAGCCTACCTACAATGTAACTAACGAACAGGCCATGTTCGGCTATGT GTAACCGGGGCTTGACACAATGGCAGGCAACAATCAGATGGAACGTAATA GATTAATTTACACATTGATTATCTCCATGAAAAAAGGCTTTTTCATGGAG ATACTGTTTTGCTTGCGTTTGGTGT

Coding sequence (CDS) from alignment at xfSc0000818:11..4035-

>Blg00212.0 ID=Blg00212.0|Name=Blg00212.0|organism=Branchiostoma lanceolatum|type=CDS|length=444bp|location=Sequence derived from alignment at xfSc0000818:11..4035- (Branchiostoma lanceolatum)
ATGAAGCAGGCCAAGGAGCTGGTGTCTGTGCTGCAGGAGGCCCGCCAGCA
GATCAACCCCAAACTCATCCAGATGGTGGACGCTGCCAGGGGCAGCTTCG
GAGGCCGGGGAGATCGGCGCCGGTACAGAACGGGCGGCGGTTCCCGTGAC
GACCGTGGCGGCGGTCGCGACTTCCGGGACCGAGGGGGGAATAGCCGCTC
GGGGGGGTACGGGCAGGGTGGGGGGAGCAGTACTGGTGGGGGGTTGAAGT
CTGGGGGTTTCACCCAGGGAGGTGCCAGCGGGGGGATGAACCAGAACTCC
GGGTCGAACCAGTCTCAACCATTCAGGGGGATGCCCATAATGAATGGTGC
CATGAGCAACGGAGGTGGGATCCCCTCCCTTCTGAGTCAAGTGGTACAGC
CCGCACAGAACACGTCAGGTTATACTGGTTATCAGTTTCAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00212.0-exon-xfSc0000818-1570713199:3991..4035Blg00212.0-exon-xfSc0000818-1570713199:3991..4035Branchiostoma lanceolatumexon
Blg00212.0-exon-xfSc0000818-1570713199:1602..1844Blg00212.0-exon-xfSc0000818-1570713199:1602..1844Branchiostoma lanceolatumexon
Blg00212.0-exon-xfSc0000818-1570713199:11..1305Blg00212.0-exon-xfSc0000818-1570713199:11..1305Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00212.0Blg00212.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
xfSc0000818genomexfSc0000818:11..4035 -
Properties
Property NameValue
GeneIDBlg00212