Blg00204.1 (mRNA) - B. lanceolatum

Overview
NameBlg00204.1
Unique NameBlg00204.1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:89291..95458+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00204.1 ID=Blg00204.1|Name=Blg00204.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6168bp|location=Sequence derived from alignment at Sc0000026:89291..95458+ (Branchiostoma lanceolatum)
TTTGGCTGTTTTGACAACCTTTATTGTCAACGAGAGCTGATCTCAATGTC CAGACGAAAGCCTAGTATACCGAGGTAGGGTTTTCCATTTTTTACTGGTT GAAAAAATACACCTTATTTGGTCTCGCACCGCAGTGGTATCAGAAGTGGT CTCGCTTCATCAACGATGTTCACGAATAGAAATGTGGTATGAACAAAATA ATTTGTGACATGATAATGCTACTTGCAATATACATTAGGATAGTCTGTGA TGCAAGTCTACGAAAACCACGCCTTCCGCACTGGTATTCCAGTGCTGAAT CAACGGACGAATCGGCCTCAGCACTGGTTTTCCAGTGCTGAAGAAAGTTC AGCACTCGTTTTCCAGTGCTGAAGAAAGTTCAGCACTCGTTTTCCAGTGC TGAATCGCTGTATTCCAGTGCTGAGTTTCTTTCAGCACTCGTTTTCCAGT GCTGAAACTTGTCTCAGCACTCGTTTTCCAGTGCTGAATGGAGTTCGGCA CTCGGTTACCAGTGCTGAATGGAGTTCGGCACTCGGTTACCAGTGCTGAA TGCGCGACAGAGCGGCGGTGCCAGGTCACGGGTCATGTCAAAGGTCATGC AGCACTGGTTACCCAGTGCTGAAACCGCCGTCAGCACTGGAACCGAGTGC TGATGTACAAAAACCACGCCTTCAGCACTGGATTTACCAGTGCTCGGGGA CAATTCAGCACTGGAAAACGAGTGCTGAAAAAAACTCAGCACTGGAAAAC GAGTGCTAAAAAAAACTCAGCACTAGAAAACGAGTGCTGAAGTGTTTTCA GCACTGGAACGTTTTTCTTACCAGTGCTGAGAGAAGTATTAGTCGTTAGA AGTGCCGCAGGGTCACTTGAACTTACTTACTTTGTGATTCATTTAGAATA AACAATGACCAACTTTATTCCGACAGAATTTTGTCATTTTGTTCATTGTG TAATTGTATAGTAGATATAGGTATGAGGGATGTGTTACAAATAAACAACT TTATTTCTTTCTTTCTGGTCATAAGTTGTATCTTTGTTTCGTGACTGTGA TGTGCGACACAGCTCTTTTGTCGGTCGCGTCGAGGATTTATAGTCAGAGC AGCGTCAGAGCACTTTACCCCGGTAATATAGAAATTGACTCTGTCAATAA GGGACGGAAAGTTTTTGACGTCGCCAACTTCTAATACATGGTTATCGAAG CTTTTCAGCCAGTGTTCTGAATACGTTAGTCTATCCTGTTTGCATTGCTG GCGTTATTACTGATTTTGCATCTACCACATATCCCTAGAATACACCGTTT CTAAAAATGGCGAATTTATGTACCCCGCGAATTTATGTTAACCAACGTTA CTCACTCACTCACTCAGGTTTGCTTGCTCCCAAGGGGAGCGTGGCGCCTC GGCAAACCCTTCTCCAGGCCGTCCTGTTCTGCGCTGTCACCCAGGCAGTG GCGATGGTGTGGCCGACTGCCTGCAGGTCTCTGTTGACTTGGTCGGTCCA AGTCCGTCTGGGCCTCCCTCTGGGCCGAGCCCAGGTGGGTGGGGGGGGTT CCTTCAGTAGGGAGGCGGGCTCCAGTGGTGGCTCTGCCCTGATGAGGTGT CCAAGGAGACGGAGACGGGCAGATCGAAGTTTGCCCGACAGTGGTGGTTG GTTCGACCTCTCACGTAGGATGTCGTTGGAGATGTGGTCGTACCACCTGA TTCCCAGGATCCTCCTCTGGCACTTGGTGTCGAAGGCATCAAGGCGGCAC TCCTGGGCAGCAGTTAGGGTCCATGTCTCCCCGCCGTAGGTAAGGATGGG CAGGACCAAGCTGTTGTACAGCCTGATTTTGGTTTGAGGAGAAATCCTTC TGCTGCACCACACTCGGTCCAGGTTGGCCATGGCTGAGGACGCACGACCG ATGCGGAGGTTGATGTCGACGTCGCACTTGCAGTCGGACGTTATGGTCCC TCCAAGATAGCAGAACCTGTCGACTGGTTCCACACGGTGCGTGTTGATCA CCAAGGCAGCTGGGGGGGCCTCGTAGTCACTGAGAGACTGTACCTTCGTC TTCTCCCAGCTGACCATCAGGCCGAGAGGTTGTGTTTCCCTGTCCATGAC CTCTAGGGCAAGCTGGAGCACATCTAGGAGTTCGGCTAGGATTGCCACGT CGTCGGCATAGTCCAGGTCAGTGATGGTGATGTCGCCGAAGCTAGCACCA CAGTCGCACTGGGCCACAGTTCTTCCCATGACGTAGTCAATGGCTGTGTT GAAGACTGTCGGGGCTAGTACGCAACCCTGGCGGACGCCACTGTTGATGG TGAAGCTGTCTGACATCTTCCCATTCACTCTCACGCAGGAGGAGGTGTCG GAGTAGAGGAGTGAGAGCAGCTTGATCAGCTTGGCCGGGACACCAATGAT CTTGAGGATCTTCCAAAGAGCTGGTCTGTCCACAGAGTCGAACGCTTGTT TGAGGTCGACATAGGCCGCGTAGAGGGGTTTCCTGTACTCCCTTCTCCTC TCAGCCAGTAGACGGAGGGCTAGGATCCTGTCCACCGTGGAGCGGCCTGG TGTGAAACCACTCTGCTCCCTTCTCTGCTTGCGGAGGAGAAGTGGACGTA GCCTTGCTAGGAGGACGTTTGCGAACACCTTGCCCGGGACACTCAGTAGG GTAATCCCTCTGTAGTTGCTGCATAGGTCCTTGGGCCCCTTCTTCCAGAA GGGGAGAATGACACCAAGCAGCCAGTCCGCAGGGATGGCCTCGCTGTTCC AGATGGCTGTGAACAGATGTTGGAGCTGGTGAGCTACTGCAGGTCCGCCC TGCAGTAGCAACTCTGGCGCGATGCCATCGGCTCCGGCAGCCCGCCCGGC TTTGAGCTTCTGTATGGCCTTGGCCACTTCATCGAGGACGGGAGGTCCAG TGGGGACAGAGTCGTCCTCGGTGGCTGAGGCAGCCTGTTCGTCTAGCTGA GGAGAGGGGGTGGGGGGAGGGCGATTCAGAAGACTCTGGAAGTGTTCCCT CCACCGTGCTACCTGTTGTTCAGGGGCGTCAGGTATGGATCCATCCAGAG CTTTCACAGGGGCCGTAGGGGGGGTTGACTTCCCGGAGAGGGTCTTTAGG GTCCTGTAGAGGGACGTTACGCCATGGATAAATTTCAGTGAAGTCCGGAA AAATACTACTATATTTGTCAGCACTCGGTTTCCAGTGCCGAAGCTTGTCT CAGCACTCGGTTTCCAGTGCTGACATCGAGTTCTCCAGTGCTGAACTCCA CTCAGCACTGGTTTTCCAGTGCGGAACTAAACTCAGCACTGGTTTTCCAG TGCTGAACTAAACTCAGCACTGGTTTTCCAGTGCTGAACTAAACTCAGCA CTGGTTTTCCAGTGCTGAAGCCACTTTCAGCACTGGAACCGAGTGCTGAA AAAGGAGAGCGTGGTTTTCGTAGTTTTGCGTCTCTGATTGTTAGTTGGCT TTTTAGTTTATCAGAAAACCTCACATCACCTCACAACTCCCTCCACCTGC TCCACAAAAACACTGAGAAAGGGGGTGGGGTGGAAGTCGTGCAAAATCAG GTTGTCCCTACTACCCTAGTTCCAGTCCAGAAATCAAACCCTCCCTAGTT CCTGGTCCAAATCGCTACAACCCCTCCCTAGTTCCTAGTCCAGATGCTTG GACCCTACCCCCTTCCAATCCAGCCTCTTCCGCGACCCCTCTGCAGTTTT TTTAAACAGCCCAGTGCATCATCATCTCATCTTGTCGTGAAAGTGTCACG GATGAGCATCACCCTCCTCCTCCAGTCCTCCCTGTCCTCCATTGCTCTTG GCAGTTCTTAACAGCCCAGTGCAGACTTCCTTTTTGTATCTTGTAAAAAT TTGCTTCTCTTACCTTCTGTTAAAAGAAACTGTGTGCCATGTCAAAGTTG TAACTTCTTATTGTAGCTGCTGCTATAGTGATATAGCCAGCTCTAACACC ATCTCATGTCTGTTATGCATTTTTAGACAATAAATGAACAACTGCAAACT TTAATGATTATGTTTCCTGTCTTCCACAGGAAGTTGGGCTGTGCTGATGT TCTCACCAACATCAAACAAGAACCTTACGACCCCACCTTAGACGGTTCAG AAGTCAGTGGTGAGGTCACATCCATCAGTGGAGAATCATCTCATACCAGC ACAAGTAGGAGAGGCATATCTATCAAACAAGAGCCATGTGAACACATCCC ACAGGGTTCACAGGTCACCACTGTCAAACAGGAGGCATGTGACCCCATCC CACAGGGTTCACAGGTCACCACTATCAAACAGGAGGCATATGACCCCATT TTGCAGGGTTCAAAGGTCATCAAACAAGATGCATGTGACCCCATCCCACA GAGTTCACAGGTCACCACTATCAAACGGGAGTCATGTGACCCCATTCTGC ACGGTTCACAGGTCATCAAACAAGTGGTATGTGACCCCATCCCACAGAGT TCACAGGTCACCACTTTCAAACAAGAGACACATGACCACACCCCACAGGG TTCACAGGTCACACAGGGTTCACAGGTCACTCCTATCATACAAGAGACAT GTGACCCCGCCCCACAGAGTTCACAGGTCACACCTGTAGGACAAGGGCCA CTACGACTGCAGGGGGATACTAACACTTCTCAAGAAGCTACTGTGGCAGG TGCAAACATACCTGACATGTCGGGCTCAGACAACAGTCCCGAGTTTGTTT GGCATGCAGAGAAAAACACAGTGATCATGACAAGCAGGAATAGCTCAAGC TCTACCTCTACCACATTTCGCACAACGCAGGGATGCACAGTCAAAGAAGT TTCTCTAGGCAGTTTACAAGTGATGGAAATACTTCCACTCGAGGAAAATC CTTCGTCCTCTGAGAGCAAGAGAGAAGAAGGTGAAGCAAGTCAAGTGAGG AATGACGATAGCGATGGGGTGGAGATGTCATTGGCTCAGATGTCAGAAGA CTTCTGTAGATGTGACATATGCAAGGCTTGGTTCCTCACCCAGCATAGTT TGAAGTACCACAGGCGAGTTCACTTGCGTGAGATGAAGAAACTGAAGGTG GAAAGTTTGGAGCAACTGTCGGAAGCACAGAAGGAAGCTCTGTCAGCCTA CGGCAGGATGTACCCCTTCCATTGTAACCTGTGTGGGGAATATTTCCAGT CGGTGCACGGCCTTAGGACCCATCGGGGGCTCAAGCACAATAATCAGAAT CACACCACAGCAAAGACCAAGAAATTCTCGACAGTCACCAGCAGTGGTCC TCTGGAGGAAGAAGATGATGATGATAATACAATTAGAAGTAGTGATTGGA TGGAGAAAGCGCTGGCTCATATGTGGAATCCGCACGATACGGGTGACTAT CGCTGTCACTTCTGTAGCTTAAATTTTAAAACAAGGAGGGATTTATCTGG TCATCTCAGAACGATACACAAGTTCCGCCACTGTGCCACCTGTAGAGTAC AGATCATGTCCGAGGAAGAGGCGAGAAGCCACGAACTGATGCACCTTTAC AAACAGCAGGGGCCAGGTGAGCCAAACACAGAGCAAGCCACAAGGACCAA AACTAGGGACAAGCCTCTTGTAGTGGGACCTAGCCAATCAGTTGGTGTCA AACGCTCAGAGGTTGAGAGTGTGGTTGCCTCCAAGTCCAAGTCTGATCGG CGCTTGCACGCCTGCGACGTCTGTAAGGCCACGTTCCTAACACAGCACCA CTTGAACTGCCACGTCGGAATCCACATGCGCGAGATGAAAAAACTGAAGG CGGAAAGCGTGGACCAGCTGGCAGATACGCGGAAGGAAGCTCTGTCGGGC TTCGCCAAGATGTACCCGTTCCGGTGCGAGGTGTGCGGGGAGCGTTTTCA GACGAAACACGGCACGGAGACCCACAAGGTGGTGAAGCACTACCAGCATT ATACAACGGCAAACACCAAAAAGGTTCCAACGGTCGGCATTGTCCCCGAC GGCCATCTGGTAGCGTACAACAAAAGGCGCGGGTTCATTTACAAGTCCTG GCAGGAGTAAAGAGCCCTGACAGCCTACATGTCCTGTATTATTCATGTAG TGCACTGTGTGTTCATGGCAAGAATGTAAAGACTGTAACGTTAGTATTGT AAAGACAACCCGACCAATCGAATCACGTGAATCGCATTGAAACTCAGATT CGTATCAGCCATTTCCCG

Coding sequence (CDS) from alignment at Sc0000026:89291..95458+

>Blg00204.1 ID=Blg00204.1|Name=Blg00204.1|organism=Branchiostoma lanceolatum|type=CDS|length=1959bp|location=Sequence derived from alignment at Sc0000026:89291..95458+ (Branchiostoma lanceolatum)
ATGTCCAGACGAAAGCCTAGTATACCGAGGAAGTTGGGCTGTGCTGATGT
TCTCACCAACATCAAACAAGAACCTTACGACCCCACCTTAGACGGTTCAG
AAGTCAGTGGTGAGGTCACATCCATCAGTGGAGAATCATCTCATACCAGC
ACAAGTAGGAGAGGCATATCTATCAAACAAGAGCCATGTGAACACATCCC
ACAGGGTTCACAGGTCACCACTGTCAAACAGGAGGCATATGACCCCATTT
TGCAGGGTTCAAAGGTCATCAAACAAGATGCATGTGACCCCATCCCACAG
AGTTCACAGGTCACCACTATCAAACGGGAGTCATGTGACCCCATTCTGCA
CGGTTCACAGGTCATCAAACAAGTGGTATGTGACCCCATCCCACAGAGTT
CACAGGTCACCACTTTCAAACAAGAGACACATGACCACACCCCACAGGGT
TCACAGGTCACACAGGGTTCACAGGTCACTCCTATCATACAAGAGACATG
TGACCCCGCCCCACAGAGTTCACAGGTCACACCTGTAGGACAAGGGCCAC
TACGACTGCAGGGGGATACTAACACTTCTCAAGAAGCTACTGTGGCAGGT
GCAAACATACCTGACATGTCGGGCTCAGACAACAGTCCCGAGTTTGTTTG
GCATGCAGAGAAAAACACAGTGATCATGACAAGCAGGAATAGCTCAAGCT
CTACCTCTACCACATTTCGCACAACGCAGGGATGCACAGTCAAAGAAGTT
TCTCTAGGCAGTTTACAAGTGATGGAAATACTTCCACTCGAGGAAAATCC
TTCGTCCTCTGAGAGCAAGAGAGAAGAAGGTGAAGCAAGTCAAGTGAGGA
ATGACGATAGCGATGGGGTGGAGATGTCATTGGCTCAGATGTCAGAAGAC
TTCTGTAGATGTGACATATGCAAGGCTTGGTTCCTCACCCAGCATAGTTT
GAAGTACCACAGGCGAGTTCACTTGCGTGAGATGAAGAAACTGAAGGTGG
AAAGTTTGGAGCAACTGTCGGAAGCACAGAAGGAAGCTCTGTCAGCCTAC
GGCAGGATGTACCCCTTCCATTGTAACCTGTGTGGGGAATATTTCCAGTC
GGTGCACGGCCTTAGGACCCATCGGGGGCTCAAGCACAATAATCAGAATC
ACACCACAGCAAAGACCAAGAAATTCTCGACAGTCACCAGCAGTGGTCCT
CTGGAGGAAGAAGATGATGATGATAATACAATTAGAAGTAGTGATTGGAT
GGAGAAAGCGCTGGCTCATATGTGGAATCCGCACGATACGGGTGACTATC
GCTGTCACTTCTGTAGCTTAAATTTTAAAACAAGGAGGGATTTATCTGGT
CATCTCAGAACGATACACAAGTTCCGCCACTGTGCCACCTGTAGAGTACA
GATCATGTCCGAGGAAGAGGCGAGAAGCCACGAACTGATGCACCTTTACA
AACAGCAGGGGCCAGGTGAGCCAAACACAGAGCAAGCCACAAGGACCAAA
ACTAGGGACAAGCCTCTTGTAGTGGGACCTAGCCAATCAGTTGGTGTCAA
ACGCTCAGAGGTTGAGAGTGTGGTTGCCTCCAAGTCCAAGTCTGATCGGC
GCTTGCACGCCTGCGACGTCTGTAAGGCCACGTTCCTAACACAGCACCAC
TTGAACTGCCACGTCGGAATCCACATGCGCGAGATGAAAAAACTGAAGGC
GGAAAGCGTGGACCAGCTGGCAGATACGCGGAAGGAAGCTCTGTCGGGCT
TCGCCAAGATGTACCCGTTCCGGTGCGAGGTGTGCGGGGAGCGTTTTCAG
ACGAAACACGGCACGGAGACCCACAAGGTGGTGAAGCACTACCAGCATTA
TACAACGGCAAACACCAAAAAGGTTCCAACGGTCGGCATTGTCCCCGACG
GCCATCTGGTAGCGTACAACAAAAGGCGCGGGTTCATTTACAAGTCCTGG
CAGGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00204.1Blg00204.1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00204.1-exon-Sc0000026-1570713199:89291..89364Blg00204.1-exon-Sc0000026-1570713199:89291..89364Branchiostoma lanceolatumexon
Blg00204.1-exon-Sc0000026-1570713199:93320..93524Blg00204.1-exon-Sc0000026-1570713199:93320..93524Branchiostoma lanceolatumexon
Blg00204.1-exon-Sc0000026-1570713199:93576..95458Blg00204.1-exon-Sc0000026-1570713199:93576..95458Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:89291..95458 +
Properties
Property NameValue
GeneIDBlg00204