Blg00134.0 (mRNA) - B. lanceolatum

Overview
NameBlg00134.0
Unique NameBlg00134.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:2396221..2398847+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00134.0 ID=Blg00134.0|Name=Blg00134.0|organism=Branchiostoma lanceolatum|type=mRNA|length=2627bp|location=Sequence derived from alignment at Sc0000026:2396221..2398847+ (Branchiostoma lanceolatum)
ATGGCAGTGACGAGTCTTGTCGTGAGTACACTGGAAACATAACTAATCAG CTAAAGCCCCCCTCTCACTGGACCCGCGGCGCGCTGGCGGCGTCACTGCG GCCAATCGAATTGACAAAGCACTCAACGAATTTCATCGACAAAAAAACAA CTAATCTTTTTAAGCTTTGTGTGTTTTGTTGTCTTTTGGTCATATTTGTA CGTTTTGAATGATATTCCCACTAAAAAGTCAAGGGTAGCACAAATCCAGC TTAGGACGCAGCGACGCCGCCAGCGTGCCGCGGGTCCAGTGAGAGGGGGC TTAACACCCATAATCACACCTACTGTAACTAGCGTTATAGTCATGGGTAC ATCAAAGTGTTCATGACACCAATGGCACCAAAGTACAACAAAGTACTTCT TGTATTCTATAAGAAAAGAATTATCCATTGAACATAGCCATTTGCACTAT ACGTATTAAACGGAGGTCCCGTGTTTGAGGAGAGCCACACCTTAAATAAC CAACAGCACTCATTAAAAAGAGTAGGCGTCCTTCCCTGTGTGAGTCGACC AAATCTTATAGTCGGTATAGGCTCCAGAACCATGCCCCTAATGTTAACAC ATATACTAGCCTCTGAGAATAGTTAAAAATAGGTGGGCGGTGTACAGACA GTAGGAATTAGATAGGTGCATGGCATTGACTAAACTATTGTGCAATATAA ATGATTATATGGGAGAATATGGATTTTTTTTTACCAAAATGATCTGTAAA TATTGTAAGAAAGTTTGTCCTCACCACCTTTTCGAATTCTACCTGTCAAA TTCTTAAACAGAACAGGTGGCCTAATCCGACGCCATGTCCATTCCATTTA CGATCATAAGACTAGTAAGAGCTATTTACCTTTGAAAAGTTATAACCATA GTTATGATTCACAGACTAATCTACATATGACATACATTAGGTACTAACCT GAATGCATTTATGACTTACTATGTATGTGTGTGTGTATGTGTGTGTGTGT GTGTGTAAAGCGAAACGTACCTGTATGGGTGTGTCCTACCGTGTATATGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGGGC ACAACGTCGGGCGCATGTCTGGGGGCAGCCCGGGATCGAACTGGGGTCCC CTTGTTTGACAGTCGGATGTTCTATTCAGTACGCCACACGATGCCACAAT TACATTATCCATTTACAATGTAACGTTATATGTCCATAGACTGTTTCTAT CTACACGAAAAAGGGACAAGCTACAGGGGCCTTGCAAACCGGGGCGGATC CTGTCAATTCTGGACATCTCAGTACCCCCACACCCATAACCACACTCCCC AGGCCTACCCATCGGCAGGGCTGGAGCAGAACTACTGTAGGAATCCGGAC GGGAAGGACAGGCCGTGGTGCTACACAAACAACCCCCTCATCAGGTGGAT GTACTGCGATGACGTCTTCGCCTGCGACGGTATAACNAATCTGCCCGGAT ATGCAGCTTGTACTCTTCAGTACAAACTTGGTGTGTTACGCATTCATGCA ATATAAACAAACAGATAAACAAAAACTTGATCTAAATGTGCATAGCACTA AGATATACATCAGGAATGGCGTTGTGACTACTGAAAATGTCAAGCGACAA CAACGTCAATTATAAGACGTGAAAGATCGCCTCTGACGGAGTTTGATTGC AATTAAATCTGAATAAACGAACATGTAACTACTGTCTCAGGCGCAGCATC GGTACGCGGTATTTATTTGGNAATTTTTATCTTATGTTAGTCTGTAGAGC TCTCTTGCTGTATCAATCTTATCCAGATTAACAGACGCTGACATTGAGTC CGTAAAACACAATGATCAGAAACACAGTCAACGTTTACGTTTCAATAAAG CATACTTCTGTTTGTTTTATATGTCCAGCCGTGCCAACACGATGCTTCTA CGCAATAGACAAGGGAAGGAGCTACGCAGGGCACGTGAATAGGTAAGATT AGACGCATTTCTAATAGCAGGCCTCCCGATCGTTCCTAACCTTCCCTAGA TCATGGTTCGGAGTAAATTGTGAGCAAATTCGTAGGCAATTGGTCTGCGA AGTTTGAACCTGGTTGAATGCTTCAGCCGAATGTTTCAAATGATTTTAAA TAGTTCATTTTATGACTTAGGAAATGTTGACCATGTTGTGAGTGTGCAAT TCTGTATGTCGCCACTCTTCAGGGCAGGAGACCGGGAGTGTCAGAGATGG GACTCCCAGTCCCCCCACAGCCATCCCTACACACCACAGGCTCATCCTGA TGCAGACCTGCAGGAAAACTTCTGTCGTAACCCTGACAACAAGGAGCGGC CCTGGTGCTACACCACGGACCCGACACTGCGGTGGAGCTACTGCGACATT ATGGAATGTGCCGGTAAGCACAACTGA

Coding sequence (CDS) from alignment at Sc0000026:2396221..2398847+

>Blg00134.0 ID=Blg00134.0|Name=Blg00134.0|organism=Branchiostoma lanceolatum|type=CDS|length=468bp|location=Sequence derived from alignment at Sc0000026:2396221..2398847+ (Branchiostoma lanceolatum)
ATGGCAGTGACGAGTCTTGTCGCCTACCCATCGGCAGGGCTGGAGCAGAA
CTACTGTAGGAATCCGGACGGGAAGGACAGGCCGTGGTGCTACACAAACA
ACCCCCTCATCAGGTGGATGTACTGCGATGACGTCTTCGCCTGCGACGGT
ATAACNAATCTGCCCGGATATGCAGCTTGTACTCTTCAGTACAAACTTGC
CGTGCCAACACGATGCTTCTACGCAATAGACAAGGGAAGGAGCTACGCAG
GGCACGTGAATAGGGCAGGAGACCGGGAGTGTCAGAGATGGGACTCCCAG
TCCCCCCACAGCCATCCCTACACACCACAGGCTCATCCTGATGCAGACCT
GCAGGAAAACTTCTGTCGTAACCCTGACAACAAGGAGCGGCCCTGGTGCT
ACACCACGGACCCGACACTGCGGTGGAGCTACTGCGACATTATGGAATGT
GCCGGTAAGCACAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00134.0Blg00134.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00134.0-exon-Sc0000026-1570713199:2396221..2396241Blg00134.0-exon-Sc0000026-1570713199:2396221..2396241Branchiostoma lanceolatumexon
Blg00134.0-exon-Sc0000026-1570713199:2397773..2397950Blg00134.0-exon-Sc0000026-1570713199:2397773..2397950Branchiostoma lanceolatumexon
Blg00134.0-exon-Sc0000026-1570713199:2398349..2398412Blg00134.0-exon-Sc0000026-1570713199:2398349..2398412Branchiostoma lanceolatumexon
Blg00134.0-exon-Sc0000026-1570713199:2398643..2398847Blg00134.0-exon-Sc0000026-1570713199:2398643..2398847Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:2396221..2398847 +
Properties
Property NameValue
GeneIDBlg00134