Blg00073.0 (mRNA) - B. lanceolatum

Overview
NameBlg00073.0
Unique NameBlg00073.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000026:1650944..1654106+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00073.0 ID=Blg00073.0|Name=Blg00073.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3163bp|location=Sequence derived from alignment at Sc0000026:1650944..1654106+ (Branchiostoma lanceolatum)
ATGAGGAAAAATCCTGCCTACGTCACCTGCAAACTCGTCAACAGGACAAG CGGACCTTTAGATCTCATGGCGAGACGACAGAGGTCCATAGTTCGCCAAT ATGTAAGTGTCTACTTTTGAATCATTTCTATGCAATCTTAGCTAAATCGC AAGGTGGCGCTGGTGCGTTGATATGCTTTTCAGGCTGCTGTTTACGCATT GACACAATCATAGCTCTCGTACGTTTCAGTATTTCATATAACTGCAACAA TCATATTTTTATAAGATTGAAAGCTGTGTAATAAGGGGAACAATGGGGAA CTTGAAATATTGAAAGTCACAACCCCACGAAAAATTAAAAATAATACTCT AATATCTAATGGTTCAGCTTATAATATAGCATGTCGTTTGCGTCCATTTT CTAAAAGAACAACGTGACCCTGACACCTGGCAATTTGGGGGACTCCAAAC TGCTGTACAGCAAGGACACCATCAAAAACACAGAGGTAGGAGACAGAAGT CCTTTATTTAAAGTATAATACTTCTTTACATTATTATTATGGTAACGATG GAAATACAAATGTCGTTATTTCACAAAGATTGGATTTTCAATTTCGCGAG TGTAAATTTCACTTTCTTTTTTGTCAGTCTTCCTTTTTTTCTTTCTTTCG TTTTTCCCTTTTTTTTATTCTTCCAAATAAAGCCAGTGGAACGTATGCAG CTCCTTCTAACTGAGCTGAGGGTCTTCAAAAACGTCATGGAGGAGATCAG ACGACACCTGAGAAGAAATGGGAAATCTGTTCCACGAATCGTCTACCGCA AACTGTATCAACAGGTAGAGGCCATGGACACATACGGAGACATCGCCAAA AGACTGGTGATTAAATTTCTTAATGATGCCCGAAGCAATTTCAGGGGGTA AAATTGGAAGTATTCTGGATATACCGGATAAGGAAATCTATATAGAATTG ACATTTACTTTCCCATTTAGCATATTTGCATCATTATTTCATACGTTGGG CGTTTGAAAAGAGCGCGGAAACAAGCCGTAAATGGAGTATTTTATTTATA CGTACCACTCAATAATCAGCCCAGAATCCAGCCGTAACCGTTTTCTGTCG ACAATCTTCGGTAACTTCTGGCCGTGTGACGTCACAATGTCCGAGCACAT TGAGCCGTGACCACGTGATTAATTTTCCGGACGTGTTCGGGACTTATCGG TCAGAATGGCGTATGTTCGGAAGATTTTAACTAATGGCTGGCCTCCAAGT GCTCAGATTTTCAATGAGTTTACACCACACAACGACATCACTTCTTTGCT CCATGATGGTCGATTAAGATAGAGTCTTTTTTTAACGAAGGCCGTGTTGG TTTGAATATATTGATGACATCGGCGAGCGCATCAATTTTCGGCCGTTTCC AAAACAAAGGTTTACGACCATACTGTAAGTCGAACAAAACAGCTGCAAAA TAAGAAAATATGTGCCGTAAATAGATTTAAAAAAGATATAGGAAAACGGA TACTAGAATAGAATGCCAGACTCAATTCCAAAGTCGAAGATGGTGATGTG AAAAAACAAAAATAAGTACATATTGCTCGCCATAAGATGAAGGCAATTTT TATTCGCACGATCGCATCAATTTTGGGGTTGTCAAAGGATACCTTACATA CAATCAAATTAACATGGCCACAGTTTGTAAGAAAAAATAGCTGAAGTTCT CAGCTGTCGATATCATTCATGGCTTACGGACAAATATATATATTTTTTTT ACTGTATACAAGACTGACTGTAGGTGTTGAGACATCGTACATGCCTGCAC TTTTGTACGTGTATATTTCGAAATAATGCTAATGTTATGTATTTTGAAGT CAGTTTGAAGTCGTTTTTTTTTCAATCTTCTTCATTCGTTATGCTTGTAA GTACACTCTTTTCCCTTTTCATCTTGGACAGGTGAACAGTCTCCAGCGGA AGAGAAAGAAGTTATCGCACTGCATGGCTTTTGCTGGCGAGTTTATTACT GTGGACACTGCCATGAGAGATCAGTACAACCGCAGGGTCGTGGAGACGCG AAAGGTACGTATGTATTCAGAAAATGCCAGCTACTTTCGCCATGCAGGTC ATTCACTTCATAGCGTTTGCAACCGATATTTGTGGCCTATCAAGACTGGG AGGGGGTCGCTAAAAGTGCCCGCGCCAGCTTTGACATCGTGTAACTGACA AACGACGTGTGCTAGGACAACCAAACTTGGTGACTTTTCCTTAAATTTCG TTTTGAACAGTTTTATGGTAATAGTATAAGTTTATCAGTGTTAATGTTTG CATGGCAACGGGTTTCTGACAGGCGTTTAATACAAAATTCCCAAATTTGG TTTAAACAATGATGTTGCTAAGGTTTTCTTGCTCAACCACAATAAGTCAA GAATCTATGGATAGATTGCTATTAAATTCAATATGTGGCTAGGTATAGAC TTAAAAAAATGATATAATGTTTGGTCCCTTGGCAGCTTTCTGTGATACTG CGGCAAAACGTCCGATTCTTTCATTTAATGTTGTGGACATGCTAAAGTCA CAGACACGGATAGCAGTGTGCCCTCCACGACATGACTTAAGTTTGGGCCC TCTGGTAACTCTCCGCTGGAACTGACGGGGTACCTAGTTAGAGCCTTTTC CATATGTTTTGTGGAAAAACCTCAGATTTCAGTATTACGCGAACACATCG ACAGTTATATGTATACAGACACAAACAAGTCTGTGTTTAAAAAAATTGTT GTGTATACCTTTGGGACACCTTTTGAGGTTTTATAGTCCACACTTCCACC ATCGGCATTTTAACGCTTTAGGAGCGTCGGTACTACCAGCGTCGGTACTA CCGGTGTTGGGTTACATGTAAAAGGTATCAGAATCTCAGATGCAGGAAGT GGCAGGTCAGAGTTGGCAGAAATACTCAGACATTGCAGGGAGTCCCCGTA AGAGGGTACTACTTCACGAGGGAGTTATTGTTTATAGTCTTCCAATTTGA TTGTCATCGTCTGCAGGTGAAGTCTGGATCAGAAGACTGGCACCGTTCCG TGCTGAGGGACGCTAGAGGCCTGTTACGTGACCTGAGGAGCACTACAGAA GTCCTGCGGAGGGCCGCTTCAACCTCAACCTGCAATGGCGGCCGGAAACC CTTCAAGTGCTGA

Coding sequence (CDS) from alignment at Sc0000026:1650944..1654106+

>Blg00073.0 ID=Blg00073.0|Name=Blg00073.0|organism=Branchiostoma lanceolatum|type=CDS|length=624bp|location=Sequence derived from alignment at Sc0000026:1650944..1654106+ (Branchiostoma lanceolatum)
ATGAGGAAAAATCCTGCCTACGTCACCTGCAAACTCGTCAACAGGACAAG
CGGACCTTTAGATCTCATGGCGAGACGACAGAGGTCCATAGTTCGCCAAT
ATAACAACGTGACCCTGACACCTGGCAATTTGGGGGACTCCAAACTGCTG
TACAGCAAGGACACCATCAAAAACACAGAGCCAGTGGAACGTATGCAGCT
CCTTCTAACTGAGCTGAGGGTCTTCAAAAACGTCATGGAGGAGATCAGAC
GACACCTGAGAAGAAATGGGAAATCTGTTCCACGAATCGTCTACCGCAAA
CTGTATCAACAGGTAGAGGCCATGGACACATACGGAGACATCGCCAAAAG
ACTGGTGAACAGTCTCCAGCGGAAGAGAAAGAAGTTATCGCACTGCATGG
CTTTTGCTGGCGAGTTTATTACTGTGGACACTGCCATGAGAGATCAGTAC
AACCGCAGGGTCGTGGAGACGCGAAAGGTGAAGTCTGGATCAGAAGACTG
GCACCGTTCCGTGCTGAGGGACGCTAGAGGCCTGTTACGTGACCTGAGGA
GCACTACAGAAGTCCTGCGGAGGGCCGCTTCAACCTCAACCTGCAATGGC
GGCCGGAAACCCTTCAAGTGCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00073.0Blg00073.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00073.0-exon-Sc0000026-1570713199:1650944..1651045Blg00073.0-exon-Sc0000026-1570713199:1650944..1651045Branchiostoma lanceolatumexon
Blg00073.0-exon-Sc0000026-1570713199:1651351..1651428Blg00073.0-exon-Sc0000026-1570713199:1651351..1651428Branchiostoma lanceolatumexon
Blg00073.0-exon-Sc0000026-1570713199:1651626..1651799Blg00073.0-exon-Sc0000026-1570713199:1651626..1651799Branchiostoma lanceolatumexon
Blg00073.0-exon-Sc0000026-1570713199:1652875..1652997Blg00073.0-exon-Sc0000026-1570713199:1652875..1652997Branchiostoma lanceolatumexon
Blg00073.0-exon-Sc0000026-1570713199:1653960..1654106Blg00073.0-exon-Sc0000026-1570713199:1653960..1654106Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000026genomeSc0000026:1650944..1654106 +
Properties
Property NameValue
GeneIDBlg00073